RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 USP17L17D6RBQ6 530 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 USP17L19D6RCP7 530 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 USP17L20D6RJB6 530 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 ENTPD3O75355 529 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 TRPA1O75762 1119 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 BAG3O95817 575 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 INPP5BP32019 993 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 LBX1P52954 281 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 SEC13P55735 322 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 MAP2K1Q02750 393 aaPredicted RBP7.01□□□□□ -1.29
CDH13-206ENST00000562601 USP17L24Q0WX57 530 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 VGLL4Q14135 290 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 MAP3K11Q16584 847 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 C4orf17Q53FE4 359 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 ANKRD13AQ8IZ07 590 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.01□□□□□ -1.29
CDH13-206ENST00000562601 NANOS1Q8WY41 292 aaKnown RBP7.01□□□□□ -1.29
CDH13-206ENST00000562601 GCC1Q96CN9 775 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 OPTNQ96CV9 577 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 GPATCH3Q96I76 525 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 WNK4Q96J92 1243 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 ZNF341Q9BYN7 854 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 LNPKQ9C0E8 428 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 OSBPL5Q9H0X9 879 aaPredicted RBP7.01□□□□□ -1.29
CDH13-206ENST00000562601 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.01□□□□□ -1.29
CDH13-206ENST00000562601 KIAA1024Q9UPX6 916 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 SIPA1L1O43166 1804 aa7.01□□□□□ -1.29
CDH13-206ENST00000562601 RPAP1Q9BWH6 1393 aaPredicted RBP7□□□□□ -1.29
CDH13-206ENST00000562601 BAZ2AQ9UIF9 1905 aaKnown RBP7□□□□□ -1.29
CDH13-206ENST00000562601 ATAD5Q96QE3 1844 aa7□□□□□ -1.29
CDH13-206ENST00000562601 TCRBV5S4A2TA0A5A2 114 aa7□□□□□ -1.29
CDH13-206ENST00000562601 F11P03951 625 aa7□□□□□ -1.29
CDH13-206ENST00000562601 HSPA8P11142 646 aaKnown RBP7□□□□□ -1.29
CDH13-206ENST00000562601 MX1P20591 662 aa7□□□□□ -1.29
CDH13-206ENST00000562601 USP5P45974 858 aa7□□□□□ -1.29
CDH13-206ENST00000562601 PHKA2P46019 1235 aa7□□□□□ -1.29
CDH13-206ENST00000562601 AAMPQ13685 434 aa7□□□□□ -1.29
CDH13-206ENST00000562601 COL13A1Q5TAT6 717 aaPredicted RBP7□□□□□ -1.29
CDH13-206ENST00000562601 DCAF15Q66K64 600 aa7□□□□□ -1.29
CDH13-206ENST00000562601 FOXR1Q6PIV2 292 aa7□□□□□ -1.29
CDH13-206ENST00000562601 RIPOR1Q6ZS17 1223 aa7□□□□□ -1.29
CDH13-206ENST00000562601 SV2AQ7L0J3 742 aa7□□□□□ -1.29
CDH13-206ENST00000562601 LCORLQ8N3X6 602 aa7□□□□□ -1.29
CDH13-206ENST00000562601 C1orf216Q8TAB5 229 aa7□□□□□ -1.29
CDH13-206ENST00000562601 PI4K2BQ8TCG2 481 aa7□□□□□ -1.29
CDH13-206ENST00000562601 HOOK2Q96ED9 719 aa7□□□□□ -1.29
CDH13-206ENST00000562601 GAS2L1Q99501 681 aaPredicted RBP7□□□□□ -1.29
CDH13-206ENST00000562601 ARMT1Q9H993 441 aa7□□□□□ -1.29
CDH13-206ENST00000562601 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7□□□□□ -1.29
CDH13-206ENST00000562601 RNF186Q9NXI6 227 aa7□□□□□ -1.29
CDH13-206ENST00000562601 SCHIP1Q9P0W5 487 aaPredicted RBP7□□□□□ -1.29
CDH13-206ENST00000562601 PALD1Q9ULE6 856 aa7□□□□□ -1.29
CDH13-206ENST00000562601 CSADQ9Y600 493 aa7□□□□□ -1.29
CDH13-206ENST00000562601 SNCAIPQ9Y6H5 919 aa7□□□□□ -1.29
CDH13-206ENST00000562601 NAV1Q8NEY1 1877 aa7□□□□□ -1.29
CDH13-206ENST00000562601 FLT1P17948 1338 aa7□□□□□ -1.29
CDH13-206ENST00000562601 CDC14CA4D256 554 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 PHF20L1A8MW92 1017 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 PRKAB2O43741 272 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 MBD4O95243 580 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 TBC1D8O95759 1140 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 RFX1P22670 979 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 ADD2P35612 726 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 PLA2G4AP47712 749 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 CTCFP49711 727 aaPredicted RBP6.99□□□□□ -1.29
CDH13-206ENST00000562601 PTK7Q13308 1070 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 RRP1BQ14684 758 aaKnown RBP6.99□□□□□ -1.29
CDH13-206ENST00000562601 LBRQ14739 615 aaKnown RBP6.99□□□□□ -1.29
CDH13-206ENST00000562601 CCDC84Q86UT8 332 aaPredicted RBP6.99□□□□□ -1.29
CDH13-206ENST00000562601 SMC5Q8IY18 1101 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 TRIM22Q8IYM9 498 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 PGBD3Q8N328 593 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 SDR42E1Q8WUS8 393 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 RIOK1Q9BRS2 568 aaKnown RBP6.99□□□□□ -1.29
CDH13-206ENST00000562601 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.99□□□□□ -1.29
CDH13-206ENST00000562601 PUS7LQ9H0K6 701 aaKnown RBP6.99□□□□□ -1.29
CDH13-206ENST00000562601 R3HDMLQ9H3Y0 253 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 STK17AQ9UEE5 414 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 ZNF112Q9UJU3 913 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 TTC41PQ6P2S7 1318 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 SALL3Q9BXA9 1300 aa6.99□□□□□ -1.29
CDH13-206ENST00000562601 ATRNL1Q5VV63 1379 aa6.98□□□□□ -1.29
CDH13-206ENST00000562601 UNCXA6NJT0 531 aa6.98□□□□□ -1.29
CDH13-206ENST00000562601 ERC2O15083 957 aa6.98□□□□□ -1.29
CDH13-206ENST00000562601 RNF113AO15541 343 aaKnown RBP6.98□□□□□ -1.29
CDH13-206ENST00000562601 ZBTB48P10074 688 aaPredicted RBP6.98□□□□□ -1.29
CDH13-206ENST00000562601 CYP2D6P10635 497 aa6.98□□□□□ -1.29
CDH13-206ENST00000562601 LORP23490 312 aaPredicted RBP6.98□□□□□ -1.29
CDH13-206ENST00000562601 TM4SF4P48230 202 aa6.98□□□□□ -1.29
CDH13-206ENST00000562601 PDE1AP54750 535 aa6.98□□□□□ -1.29
CDH13-206ENST00000562601 NUCB1Q02818 461 aa6.98□□□□□ -1.29
CDH13-206ENST00000562601 SHROOM1Q2M3G4 852 aaPredicted RBP6.98□□□□□ -1.29
CDH13-206ENST00000562601 CRTC2Q53ET0 693 aaPredicted RBP6.98□□□□□ -1.29
CDH13-206ENST00000562601 CHD1LQ86WJ1 897 aa6.98□□□□□ -1.29
CDH13-206ENST00000562601 ANKMY2Q8IV38 441 aa6.98□□□□□ -1.29
CDH13-206ENST00000562601 CRACR2BQ8N4Y2 399 aaPredicted RBP6.98□□□□□ -1.29
CDH13-206ENST00000562601 SEC62Q99442 399 aaKnown RBP6.98□□□□□ -1.29
CDH13-206ENST00000562601 PTPN18Q99952 460 aa6.98□□□□□ -1.29
CDH13-206ENST00000562601 FSD1Q9BTV5 496 aa6.98□□□□□ -1.29
CDH13-206ENST00000562601 PHIPQ8WWQ0 1821 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms