RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 SYDE2Q5VT97 1194 aa20.93■□□□□ 0.94
CMTM3-204ENST00000562357 ZNF467Q7Z7K2 595 aaPredicted RBP20.93■□□□□ 0.94
CMTM3-204ENST00000562357 C7orf61Q8IZ16 206 aa20.93■□□□□ 0.94
CMTM3-204ENST00000562357 ZKSCAN3Q9BRR0 538 aa20.93■□□□□ 0.94
CMTM3-204ENST00000562357 UBAC1Q9BSL1 405 aa20.93■□□□□ 0.94
CMTM3-204ENST00000562357 KAT14Q9H8E8 782 aa20.93■□□□□ 0.94
CMTM3-204ENST00000562357 PNMA2Q9UL42 364 aa20.93■□□□□ 0.94
CMTM3-204ENST00000562357 CCPG1Q9ULG6 757 aa20.93■□□□□ 0.94
CMTM3-204ENST00000562357 FRMPD2Q68DX3 1309 aaPredicted RBP20.93■□□□□ 0.94
CMTM3-204ENST00000562357 SYNGAP1Q96PV0 1343 aa20.93■□□□□ 0.94
CMTM3-204ENST00000562357 CEP290O15078 2479 aa20.92■□□□□ 0.94
CMTM3-204ENST00000562357 DNAJC25-GNG10A0A024R161 153 aa20.92■□□□□ 0.94
CMTM3-204ENST00000562357 POTEB2H3BUK9 544 aa20.92■□□□□ 0.94
CMTM3-204ENST00000562357 COL6A1P12109 1028 aa20.92■□□□□ 0.94
CMTM3-204ENST00000562357 GPATCH4Q5T3I0 446 aaKnown RBP20.92■□□□□ 0.94
CMTM3-204ENST00000562357 ANO1Q5XXA6 986 aa20.92■□□□□ 0.94
CMTM3-204ENST00000562357 CENPQQ7L2Z9 268 aaPredicted RBP20.92■□□□□ 0.94
CMTM3-204ENST00000562357 RASGRP2Q7LDG7 609 aa20.92■□□□□ 0.94
CMTM3-204ENST00000562357 AGBL1Q96MI9 1066 aa20.92■□□□□ 0.94
CMTM3-204ENST00000562357 TRERF1Q96PN7 1200 aa20.92■□□□□ 0.94
CMTM3-204ENST00000562357 ZSCAN10Q96SZ4 725 aaPredicted RBP20.92■□□□□ 0.94
CMTM3-204ENST00000562357 U3KPZ7 1027 aaPredicted RBP20.92■□□□□ 0.94
CMTM3-204ENST00000562357 PFASO15067 1338 aa20.92■□□□□ 0.94
CMTM3-204ENST00000562357 ZNF536O15090 1300 aa20.91■□□□□ 0.94
CMTM3-204ENST00000562357 ICAM1P05362 532 aa20.91■□□□□ 0.94
CMTM3-204ENST00000562357 AKR1A1P14550 325 aa20.91■□□□□ 0.94
CMTM3-204ENST00000562357 SLC16A2P36021 539 aa20.91■□□□□ 0.94
CMTM3-204ENST00000562357 LAMA4Q16363 1823 aa20.91■□□□□ 0.94
CMTM3-204ENST00000562357 HABP4Q5JVS0 413 aaKnown RBP20.91■□□□□ 0.94
CMTM3-204ENST00000562357 BTNL9Q6UXG8 535 aa20.91■□□□□ 0.94
CMTM3-204ENST00000562357 CHRDL2Q6WN34 429 aa20.91■□□□□ 0.94
CMTM3-204ENST00000562357 SENP6Q9GZR1 1112 aaPredicted RBP20.91■□□□□ 0.94
CMTM3-204ENST00000562357 RANBP17Q9H2T7 1088 aaKnown RBP20.91■□□□□ 0.94
CMTM3-204ENST00000562357 COLQQ9Y215 455 aaPredicted RBP20.91■□□□□ 0.94
CMTM3-204ENST00000562357 SNAP25P60880 206 aa20.9■□□□□ 0.94
CMTM3-204ENST00000562357 ZNF543Q08ER8 600 aa20.9■□□□□ 0.94
CMTM3-204ENST00000562357 GJC2Q5T442 439 aaPredicted RBP20.9■□□□□ 0.94
CMTM3-204ENST00000562357 TTBK2Q6IQ55 1244 aa20.9■□□□□ 0.94
CMTM3-204ENST00000562357 MAMDC4Q6UXC1 1216 aa20.9■□□□□ 0.94
CMTM3-204ENST00000562357 PNMA1Q8ND90 353 aa20.9■□□□□ 0.94
CMTM3-204ENST00000562357 IL25Q9H293 177 aa20.9■□□□□ 0.94
CMTM3-204ENST00000562357 XPNPEP3Q9NQH7 507 aa20.9■□□□□ 0.94
CMTM3-204ENST00000562357 ZHX1Q9UKY1 873 aaPredicted RBP20.9■□□□□ 0.94
CMTM3-204ENST00000562357 TNKSO95271 1327 aa20.89■□□□□ 0.93
CMTM3-204ENST00000562357 RNF180Q86T96 592 aa20.89■□□□□ 0.93
CMTM3-204ENST00000562357 A1CFQ9NQ94 594 aaKnown RBP20.89■□□□□ 0.93
CMTM3-204ENST00000562357 ZSWIM5Q9P217 1185 aa20.89■□□□□ 0.93
CMTM3-204ENST00000562357 FAM184BQ9ULE4 1060 aa20.89■□□□□ 0.93
CMTM3-204ENST00000562357 SGSM2O43147 1006 aa20.88■□□□□ 0.93
CMTM3-204ENST00000562357 SNHG28P0DPA3 235 aa20.88■□□□□ 0.93
CMTM3-204ENST00000562357 KIAA1211Q6ZU35 1233 aa20.88■□□□□ 0.93
CMTM3-204ENST00000562357 RALYLQ86SE5 291 aaKnown RBP20.88■□□□□ 0.93
CMTM3-204ENST00000562357 ABHD16BQ9H3Z7 469 aa20.88■□□□□ 0.93
CMTM3-204ENST00000562357 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.88■□□□□ 0.93
CMTM3-204ENST00000562357 ZNFX1Q9P2E3 1918 aaKnown RBP20.88■□□□□ 0.93
CMTM3-204ENST00000562357 ASB14A6NK59 587 aa20.87■□□□□ 0.93
CMTM3-204ENST00000562357 ZNF865P0CJ78 1059 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-204ENST00000562357 TAL1P17542 331 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-204ENST00000562357 ASPRV1Q53RT3 343 aa20.87■□□□□ 0.93
CMTM3-204ENST00000562357 IFIT1BQ5T764 474 aaKnown RBP20.87■□□□□ 0.93
CMTM3-204ENST00000562357 NSMFQ6X4W1 530 aa20.87■□□□□ 0.93
CMTM3-204ENST00000562357 ENAHQ8N8S7 591 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-204ENST00000562357 ANKS1AQ92625 1134 aa20.87■□□□□ 0.93
CMTM3-204ENST00000562357 ZMYND8Q9ULU4 1186 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-204ENST00000562357 PLXNA1Q9UIW2 1896 aa20.87■□□□□ 0.93
CMTM3-204ENST00000562357 FRMPD3Q5JV73 1810 aa20.86■□□□□ 0.93
CMTM3-204ENST00000562357 ERICH2A1L162 156 aa20.86■□□□□ 0.93
CMTM3-204ENST00000562357 SNAI1O95863 264 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-204ENST00000562357 ACVR2BQ13705 512 aa20.86■□□□□ 0.93
CMTM3-204ENST00000562357 LRRC41Q15345 812 aa20.86■□□□□ 0.93
CMTM3-204ENST00000562357 LRRC26Q2I0M4 334 aa20.86■□□□□ 0.93
CMTM3-204ENST00000562357 ARMCX2Q7L311 632 aa20.86■□□□□ 0.93
CMTM3-204ENST00000562357 FAM133AQ8N9E0 248 aa20.86■□□□□ 0.93
CMTM3-204ENST00000562357 SPC25Q9HBM1 224 aa20.86■□□□□ 0.93
CMTM3-204ENST00000562357 DHX16O60231 1041 aaKnown RBP20.85■□□□□ 0.93
CMTM3-204ENST00000562357 PARP1P09874 1014 aaKnown RBP20.85■□□□□ 0.93
CMTM3-204ENST00000562357 ATN1P54259 1190 aaPredicted RBP20.85■□□□□ 0.93
CMTM3-204ENST00000562357 CNTN2Q02246 1040 aa20.85■□□□□ 0.93
CMTM3-204ENST00000562357 PTH1RQ03431 593 aa20.85■□□□□ 0.93
CMTM3-204ENST00000562357 SART3Q15020 963 aaKnown RBP20.85■□□□□ 0.93
CMTM3-204ENST00000562357 MUM1L1Q5H9M0 696 aa20.85■□□□□ 0.93
CMTM3-204ENST00000562357 CCDC144CPQ8IYA2 1237 aa20.85■□□□□ 0.93
CMTM3-204ENST00000562357 CYP39A1Q9NYL5 469 aa20.85■□□□□ 0.93
CMTM3-204ENST00000562357 ADD3Q9UEY8 706 aaKnown RBP20.85■□□□□ 0.93
CMTM3-204ENST00000562357 WDR19Q8NEZ3 1342 aa20.84■□□□□ 0.93
CMTM3-204ENST00000562357 PGK1P00558 417 aa20.84■□□□□ 0.93
CMTM3-204ENST00000562357 GOLGA8HP0CJ92 632 aa20.84■□□□□ 0.93
CMTM3-204ENST00000562357 NCOA7Q8NI08 942 aa20.84■□□□□ 0.93
CMTM3-204ENST00000562357 PRKAG2Q9UGJ0 569 aa20.84■□□□□ 0.93
CMTM3-204ENST00000562357 PTPDC1A2A3K4 754 aa20.83■□□□□ 0.93
CMTM3-204ENST00000562357 CYP21A2P08686 494 aa20.83■□□□□ 0.93
CMTM3-204ENST00000562357 SYN1P17600 705 aa20.83■□□□□ 0.93
CMTM3-204ENST00000562357 ADCYAP1R1P41586 468 aa20.83■□□□□ 0.93
CMTM3-204ENST00000562357 FGD4Q96M96 766 aa20.83■□□□□ 0.93
CMTM3-204ENST00000562357 MPHOSPH6Q99547 160 aaKnown RBP20.83■□□□□ 0.93
CMTM3-204ENST00000562357 RBM27Q9P2N5 1060 aaKnown RBP20.83■□□□□ 0.93
CMTM3-204ENST00000562357 DUSP11O75319 330 aaKnown RBP20.82■□□□□ 0.92
CMTM3-204ENST00000562357 CASC1Q6TDU7 716 aa20.82■□□□□ 0.92
CMTM3-204ENST00000562357 NOL8Q76FK4 1167 aaKnown RBP20.82■□□□□ 0.92
CMTM3-204ENST00000562357 UBA5Q9GZZ9 404 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms