RNA–Protein interactions for RNA: ENST00000562325.5

CDH11-203, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-203ENST00000562325 MIER1Q8N108 512 aa23.1■■□□□ 1.29
CDH11-203ENST00000562325 CPXCR1Q8N123 301 aa23.1■■□□□ 1.29
CDH11-203ENST00000562325 ARVCFO00192 962 aa23.09■■□□□ 1.29
CDH11-203ENST00000562325 GPAA1O43292 621 aa23.09■■□□□ 1.29
CDH11-203ENST00000562325 CCDC144BQ3MJ40 725 aa23.09■■□□□ 1.29
CDH11-203ENST00000562325 RASIP1Q5U651 963 aa23.09■■□□□ 1.29
CDH11-203ENST00000562325 KIFC2Q96AC6 838 aa23.09■■□□□ 1.29
CDH11-203ENST00000562325 CEP95Q96GE4 821 aa23.09■■□□□ 1.29
CDH11-203ENST00000562325 CABYRO75952 493 aa23.08■■□□□ 1.29
CDH11-203ENST00000562325 TDO2P48775 406 aa23.08■■□□□ 1.29
CDH11-203ENST00000562325 PSRC1Q6PGN9 363 aaPredicted RBP23.08■■□□□ 1.29
CDH11-203ENST00000562325 CCDC129Q6ZRS4 1044 aa23.08■■□□□ 1.29
CDH11-203ENST00000562325 ARMCX2Q7L311 632 aa23.08■■□□□ 1.29
CDH11-203ENST00000562325 TMEM199Q8N511 208 aa23.08■■□□□ 1.29
CDH11-203ENST00000562325 TIFAQ96CG3 184 aa23.08■■□□□ 1.29
CDH11-203ENST00000562325 FGD4Q96M96 766 aa23.08■■□□□ 1.29
CDH11-203ENST00000562325 NACAP1Q9BZK3 213 aa23.08■■□□□ 1.29
CDH11-203ENST00000562325 RAVER2Q9HCJ3 691 aaKnown RBP23.08■■□□□ 1.29
CDH11-203ENST00000562325 EPB41L4AQ9HCS5 686 aaPredicted RBP23.08■■□□□ 1.29
CDH11-203ENST00000562325 MYADML2A6NDP7 307 aa23.07■■□□□ 1.28
CDH11-203ENST00000562325 TLR3O15455 904 aaKnown RBP23.07■■□□□ 1.28
CDH11-203ENST00000562325 PLA2G6O60733 806 aa23.07■■□□□ 1.28
CDH11-203ENST00000562325 BMP3P12645 472 aa23.07■■□□□ 1.28
CDH11-203ENST00000562325 PDE4BQ07343 736 aa23.07■■□□□ 1.28
CDH11-203ENST00000562325 TKFCQ3LXA3 575 aa23.07■■□□□ 1.28
CDH11-203ENST00000562325 GNASQ5JWF2 1037 aa23.07■■□□□ 1.28
CDH11-203ENST00000562325 FAM160B2Q86V87 743 aa23.07■■□□□ 1.28
CDH11-203ENST00000562325 NEDD1Q8NHV4 660 aa23.07■■□□□ 1.28
CDH11-203ENST00000562325 GMCL1Q96IK5 515 aa23.07■■□□□ 1.28
CDH11-203ENST00000562325 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.07■■□□□ 1.28
CDH11-203ENST00000562325 KATNBL1Q9H079 304 aa23.07■■□□□ 1.28
CDH11-203ENST00000562325 ZNF576Q9H609 170 aa23.07■■□□□ 1.28
CDH11-203ENST00000562325 RCAN3Q9UKA8 241 aa23.07■■□□□ 1.28
CDH11-203ENST00000562325 PATL2C9JE40 543 aaKnown RBP23.06■■□□□ 1.28
CDH11-203ENST00000562325 SLC3A2P08195 630 aaKnown RBP23.06■■□□□ 1.28
CDH11-203ENST00000562325 STAT2P52630 851 aa23.06■■□□□ 1.28
CDH11-203ENST00000562325 GRIN2CQ14957 1233 aa23.06■■□□□ 1.28
CDH11-203ENST00000562325 TMEM240Q5SV17 173 aa23.06■■□□□ 1.28
CDH11-203ENST00000562325 FAM126BQ8IXS8 530 aa23.06■■□□□ 1.28
CDH11-203ENST00000562325 FAM133AQ8N9E0 248 aa23.06■■□□□ 1.28
CDH11-203ENST00000562325 CHURC1Q8WUH1 139 aa23.06■■□□□ 1.28
CDH11-203ENST00000562325 DCTPP1Q9H773 170 aa23.06■■□□□ 1.28
CDH11-203ENST00000562325 ACAD9Q9H845 621 aa23.06■■□□□ 1.28
CDH11-203ENST00000562325 ASB14A6NK59 587 aa23.05■■□□□ 1.28
CDH11-203ENST00000562325 ADCY6O43306 1168 aa23.05■■□□□ 1.28
CDH11-203ENST00000562325 SLFN13Q68D06 897 aa23.05■■□□□ 1.28
CDH11-203ENST00000562325 CCDC144CPQ8IYA2 1237 aa23.05■■□□□ 1.28
CDH11-203ENST00000562325 MTIF3Q9H2K0 278 aaKnown RBP23.05■■□□□ 1.28
CDH11-203ENST00000562325 CTAGE5O15320 804 aa23.04■■□□□ 1.28
CDH11-203ENST00000562325 SMARCA5O60264 1052 aaPredicted RBP23.04■■□□□ 1.28
CDH11-203ENST00000562325 TSPY3P0CV98 308 aa23.04■■□□□ 1.28
CDH11-203ENST00000562325 TSPY8P0CW00 308 aa23.04■■□□□ 1.28
CDH11-203ENST00000562325 IFNL3Q8IZI9 196 aa23.04■■□□□ 1.28
CDH11-203ENST00000562325 SLC43A3Q8NBI5 491 aa23.04■■□□□ 1.28
CDH11-203ENST00000562325 TTC41PQ6P2S7 1318 aa23.04■■□□□ 1.28
CDH11-203ENST00000562325 MYH4Q9Y623 1939 aa23.04■■□□□ 1.28
CDH11-203ENST00000562325 MUC3AQ02505 3323 aa23.03■■□□□ 1.28
CDH11-203ENST00000562325 CD4P01730 458 aa23.03■■□□□ 1.28
CDH11-203ENST00000562325 APPP05067 770 aa23.03■■□□□ 1.28
CDH11-203ENST00000562325 TJAP1Q5JTD0 557 aa23.03■■□□□ 1.28
CDH11-203ENST00000562325 AKNAD1Q5T1N1 836 aa23.03■■□□□ 1.28
CDH11-203ENST00000562325 C16orf59Q7L2K0 433 aa23.03■■□□□ 1.28
CDH11-203ENST00000562325 LRRC47Q8N1G4 583 aaKnown RBP23.03■■□□□ 1.28
CDH11-203ENST00000562325 STAG1Q8WVM7 1258 aa23.03■■□□□ 1.28
CDH11-203ENST00000562325 VTI1AQ96AJ9 217 aa23.03■■□□□ 1.28
CDH11-203ENST00000562325 PRDM6Q9NQX0 595 aa23.03■■□□□ 1.28
CDH11-203ENST00000562325 Q9Y3F1 56 aa23.03■■□□□ 1.28
CDH11-203ENST00000562325 PRDM1O75626 825 aa23.02■■□□□ 1.28
CDH11-203ENST00000562325 CSF2RAP15509 400 aa23.02■■□□□ 1.28
CDH11-203ENST00000562325 SLC4A3P48751 1232 aa23.02■■□□□ 1.28
CDH11-203ENST00000562325 TNFAIP2Q03169 654 aa23.02■■□□□ 1.28
CDH11-203ENST00000562325 RAB30Q15771 203 aa23.02■■□□□ 1.28
CDH11-203ENST00000562325 STK11IPQ8N1F8 1099 aa23.02■■□□□ 1.28
CDH11-203ENST00000562325 GAS2L1Q99501 681 aaPredicted RBP23.02■■□□□ 1.28
CDH11-203ENST00000562325 A1CFQ9NQ94 594 aaKnown RBP23.02■■□□□ 1.28
CDH11-203ENST00000562325 GNEQ9Y223 722 aaKnown RBP23.02■■□□□ 1.28
CDH11-203ENST00000562325 TMEM232C9JQI7 657 aa23.01■■□□□ 1.27
CDH11-203ENST00000562325 ERC2O15083 957 aa23.01■■□□□ 1.27
CDH11-203ENST00000562325 ZEB2O60315 1214 aa23.01■■□□□ 1.27
CDH11-203ENST00000562325 SLC1A4P43007 532 aa23.01■■□□□ 1.27
CDH11-203ENST00000562325 HERVK_113Q902F9 699 aa23.01■■□□□ 1.27
CDH11-203ENST00000562325 PBX4Q9BYU1 374 aa23.01■■□□□ 1.27
CDH11-203ENST00000562325 IL23AQ9NPF7 189 aa23.01■■□□□ 1.27
CDH11-203ENST00000562325 M0R2C6 588 aa23■■□□□ 1.27
CDH11-203ENST00000562325 DIEXFQ68CQ4 756 aaKnown RBP23■■□□□ 1.27
CDH11-203ENST00000562325 NAPBQ9H115 298 aa23■■□□□ 1.27
CDH11-203ENST00000562325 RNF146Q9NTX7 359 aa23■■□□□ 1.27
CDH11-203ENST00000562325 ZNF536O15090 1300 aa23■■□□□ 1.27
CDH11-203ENST00000562325 LOC102724159A0A0B4J2E5 919 aa22.99■■□□□ 1.27
CDH11-203ENST00000562325 TFAP4Q01664 338 aa22.99■■□□□ 1.27
CDH11-203ENST00000562325 CNTN2Q02246 1040 aa22.99■■□□□ 1.27
CDH11-203ENST00000562325 PPARAQ07869 468 aa22.99■■□□□ 1.27
CDH11-203ENST00000562325 PWP2Q15269 919 aaKnown RBP22.99■■□□□ 1.27
CDH11-203ENST00000562325 IQSEC1Q6DN90 963 aa22.99■■□□□ 1.27
CDH11-203ENST00000562325 ZNF365Q70YC5 407 aa22.99■■□□□ 1.27
CDH11-203ENST00000562325 TLK2Q86UE8 772 aa22.99■■□□□ 1.27
CDH11-203ENST00000562325 ATXN2LQ8WWM7 1075 aaKnown RBP22.99■■□□□ 1.27
CDH11-203ENST00000562325 HOMER2Q9NSB8 354 aa22.99■■□□□ 1.27
CDH11-203ENST00000562325 MCM3APO60318 1980 aa22.98■■□□□ 1.27
CDH11-203ENST00000562325 IRX5P78411 483 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms