RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 ANAPC5Q9UJX4 755 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 A6NNZ2 444 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 BCAMP50895 628 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 TUBB8Q3ZCM7 444 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 PPM1KQ8N3J5 372 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 CABS1Q96KC9 395 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 DISC1Q9NRI5 854 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 AKT3Q9Y243 479 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 A6NJR5 290 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 XPOTO43592 962 aaKnown RBP12.34□□□□□ -0.43
RPAP1-204ENST00000562303 PTPREP23469 700 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 VPS41P49754 854 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 PRPSAP1Q14558 356 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 NEK8Q86SG6 692 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 IFNL3Q8IZI9 196 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 TAB3Q8N5C8 712 aaPredicted RBP12.34□□□□□ -0.43
RPAP1-204ENST00000562303 CSRNP1Q96S65 589 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 NEURL1BA8MQ27 555 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 Q3C1V9 767 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 JADE1Q6IE81 842 aa12.34□□□□□ -0.43
RPAP1-204ENST00000562303 PARD3Q8TEW0 1356 aa12.33□□□□□ -0.43
RPAP1-204ENST00000562303 KCNJ18B7U540 433 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 RGS16O15492 202 aaPredicted RBP12.33□□□□□ -0.44
RPAP1-204ENST00000562303 KCNJ12Q14500 433 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 CAPN12Q6ZSI9 719 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 PNMA8AQ86V59 439 aaPredicted RBP12.33□□□□□ -0.44
RPAP1-204ENST00000562303 CCDC13Q8IYE1 715 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 FAM114A2Q9NRY5 505 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 LARSQ9P2J5 1176 aaKnown RBP12.33□□□□□ -0.44
RPAP1-204ENST00000562303 RNF40O75150 1001 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 OR52Z1P0C646 297 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 ATP5JP18859 108 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 PPP2R5AQ15172 486 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 RINT1Q6NUQ1 792 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 RSRC2Q7L4I2 434 aaKnown RBP12.33□□□□□ -0.44
RPAP1-204ENST00000562303 BBS5Q8N3I7 341 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 GPKOWQ92917 476 aaPredicted RBP eCLIP12.33□□□□□ -0.44
RPAP1-204ENST00000562303 HDAC11Q96DB2 347 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 SEPT9Q9UHD8 586 aaPredicted RBP12.33□□□□□ -0.44
RPAP1-204ENST00000562303 BAG5Q9UL15 447 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 COL4A3BPQ9Y5P4 624 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 ZNF608Q9ULD9 1512 aaPredicted RBP12.33□□□□□ -0.44
RPAP1-204ENST00000562303 KCNK3O14649 394 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 DTNBO60941 627 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 RNF8O76064 485 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 INPP5BP32019 993 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 METTL23Q86XA0 190 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 DDX41Q9UJV9 622 aaKnown RBP12.33□□□□□ -0.44
RPAP1-204ENST00000562303 RNASELQ05823 741 aaKnown RBP12.33□□□□□ -0.44
RPAP1-204ENST00000562303 FAM71BQ8TC56 605 aa12.33□□□□□ -0.44
RPAP1-204ENST00000562303 CLRN2A0PK11 232 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 ARHGAP42A6NI28 874 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 TMTC4Q5T4D3 741 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 KRIT1O00522 736 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 CHL1O00533 1208 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 MORC3Q14149 939 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 NLGN1Q8N2Q7 840 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 ZNF526Q8TF50 670 aaPredicted RBP12.32□□□□□ -0.44
RPAP1-204ENST00000562303 DNAJC5BQ9UF47 199 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 EDC4Q6P2E9 1401 aaKnown RBP12.32□□□□□ -0.44
RPAP1-204ENST00000562303 SPDYE2BA6NHP3 402 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 IGSF3O75054 1194 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 SPDYE6P0CI01 402 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 BFSP1Q12934 665 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 PTPROQ16827 1216 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 KAZNQ674X7 775 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 DACT3Q96B18 629 aaPredicted RBP12.32□□□□□ -0.44
RPAP1-204ENST00000562303 HVCN1Q96D96 273 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 LMNB1P20700 586 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 ECE1P42892 770 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 GUCY2FP51841 1108 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 EIF4A1P60842 406 aaKnown RBP12.32□□□□□ -0.44
RPAP1-204ENST00000562303 KIAA1841Q6NSI8 718 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 EFCC1Q9HA90 598 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 VCX3AQ9NNX9 186 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 IRAK4Q9NWZ3 460 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 RABGAP1Q9Y3P9 1069 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 MAD1L1Q9Y6D9 718 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 H7C0C1 242 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 PPEF1O14829 653 aaPredicted RBP12.32□□□□□ -0.44
RPAP1-204ENST00000562303 GARSP41250 739 aaKnown RBP12.32□□□□□ -0.44
RPAP1-204ENST00000562303 ATP5OP48047 213 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 ZNF449Q6P9G9 518 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 ANGPTL3Q9Y5C1 460 aa12.32□□□□□ -0.44
RPAP1-204ENST00000562303 CHRNDQ07001 517 aa12.31□□□□□ -0.44
RPAP1-204ENST00000562303 AOC3Q16853 763 aa12.31□□□□□ -0.44
RPAP1-204ENST00000562303 USPL1Q5W0Q7 1092 aa12.31□□□□□ -0.44
RPAP1-204ENST00000562303 DCLK2Q8N568 766 aa12.31□□□□□ -0.44
RPAP1-204ENST00000562303 TNKSO95271 1327 aa12.31□□□□□ -0.44
RPAP1-204ENST00000562303 ARPP19P56211 112 aa12.31□□□□□ -0.44
RPAP1-204ENST00000562303 NOSTRINQ8IVI9 506 aa12.31□□□□□ -0.44
RPAP1-204ENST00000562303 FANCBQ8NB91 859 aa12.31□□□□□ -0.44
RPAP1-204ENST00000562303 BUB1O43683 1085 aa12.31□□□□□ -0.44
RPAP1-204ENST00000562303 SCG2P13521 617 aa12.31□□□□□ -0.44
RPAP1-204ENST00000562303 CTNNA1P35221 906 aaKnown RBP12.31□□□□□ -0.44
RPAP1-204ENST00000562303 NSFP46459 744 aaKnown RBP12.31□□□□□ -0.44
RPAP1-204ENST00000562303 ADKP55263 362 aaKnown RBP12.31□□□□□ -0.44
RPAP1-204ENST00000562303 ARHGAP4P98171 946 aa12.31□□□□□ -0.44
RPAP1-204ENST00000562303 CYP4A11Q02928 519 aa12.31□□□□□ -0.44
RPAP1-204ENST00000562303 PPFIA1Q13136 1202 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms