RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 NDUFB10O96000 172 aa18.88■□□□□ 0.61
PKD1-225ENST00000562297 ARL6IP4Q66PJ3 421 aaKnown RBP18.88■□□□□ 0.61
PKD1-225ENST00000562297 PPP1R18Q6NYC8 613 aa18.88■□□□□ 0.61
PKD1-225ENST00000562297 KRT25Q7Z3Z0 450 aa18.88■□□□□ 0.61
PKD1-225ENST00000562297 EPSTI1Q96J88 318 aa18.88■□□□□ 0.61
PKD1-225ENST00000562297 A0A087X0B3 334 aa18.87■□□□□ 0.61
PKD1-225ENST00000562297 REXO1Q8N1G1 1221 aaKnown RBP18.87■□□□□ 0.61
PKD1-225ENST00000562297 CNNM3Q8NE01 707 aa18.87■□□□□ 0.61
PKD1-225ENST00000562297 DPF2Q92785 391 aa18.87■□□□□ 0.61
PKD1-225ENST00000562297 SYMPKQ92797 1274 aaKnown RBP18.87■□□□□ 0.61
PKD1-225ENST00000562297 SBF1O95248 1867 aa18.87■□□□□ 0.61
PKD1-225ENST00000562297 MYH7BA7E2Y1 1941 aa18.87■□□□□ 0.61
PKD1-225ENST00000562297 VWA3AA6NCI4 1184 aa18.86■□□□□ 0.61
PKD1-225ENST00000562297 ACTN4O43707 911 aaKnown RBP18.86■□□□□ 0.61
PKD1-225ENST00000562297 GMPSP49915 693 aaPredicted RBP18.86■□□□□ 0.61
PKD1-225ENST00000562297 PNOCQ13519 176 aa18.86■□□□□ 0.61
PKD1-225ENST00000562297 TRIM44Q96DX7 344 aaPredicted RBP18.86■□□□□ 0.61
PKD1-225ENST00000562297 ZBTB21Q9ULJ3 1066 aa18.86■□□□□ 0.61
PKD1-225ENST00000562297 SMCHD1A6NHR9 2005 aa18.85■□□□□ 0.61
PKD1-225ENST00000562297 FOXN1O15353 648 aa18.85■□□□□ 0.61
PKD1-225ENST00000562297 RAD21O60216 631 aa18.85■□□□□ 0.61
PKD1-225ENST00000562297 ADCY5O95622 1261 aa18.85■□□□□ 0.61
PKD1-225ENST00000562297 ADCY7P51828 1080 aa18.85■□□□□ 0.61
PKD1-225ENST00000562297 NONOQ15233 471 aaKnown RBP eCLIP18.85■□□□□ 0.61
PKD1-225ENST00000562297 DPCR1Q3MIW9 517 aa18.85■□□□□ 0.61
PKD1-225ENST00000562297 MIGA2Q7L4E1 593 aa18.85■□□□□ 0.61
PKD1-225ENST00000562297 MICALL2Q8IY33 904 aa18.85■□□□□ 0.61
PKD1-225ENST00000562297 TEPSINQ96N21 525 aa18.85■□□□□ 0.61
PKD1-225ENST00000562297 NUP88Q99567 741 aaPredicted RBP18.85■□□□□ 0.61
PKD1-225ENST00000562297 TMEM60Q9H2L4 133 aa18.85■□□□□ 0.61
PKD1-225ENST00000562297 RIC8AQ9NPQ8 531 aa18.85■□□□□ 0.61
PKD1-225ENST00000562297 BIN2Q9UBW5 565 aaPredicted RBP18.85■□□□□ 0.61
PKD1-225ENST00000562297 SERTAD1Q9UHV2 236 aa18.85■□□□□ 0.61
PKD1-225ENST00000562297 ECE1P42892 770 aa18.84■□□□□ 0.61
PKD1-225ENST00000562297 RASA3Q14644 834 aa18.84■□□□□ 0.61
PKD1-225ENST00000562297 PDILTQ8N807 584 aa18.84■□□□□ 0.61
PKD1-225ENST00000562297 TMEM260Q9NX78 707 aa18.84■□□□□ 0.61
PKD1-225ENST00000562297 ZNF541Q9H0D2 1346 aa18.84■□□□□ 0.61
PKD1-225ENST00000562297 CLK2P49760 499 aaKnown RBP18.84■□□□□ 0.61
PKD1-225ENST00000562297 NLRP12P59046 1061 aa18.84■□□□□ 0.61
PKD1-225ENST00000562297 QRICH1Q2TAL8 776 aa18.84■□□□□ 0.61
PKD1-225ENST00000562297 KIAA1755Q5JYT7 1200 aa18.84■□□□□ 0.61
PKD1-225ENST00000562297 JAKMIP3Q5VZ66 844 aa18.84■□□□□ 0.61
PKD1-225ENST00000562297 DHX40Q8IX18 779 aaKnown RBP18.84■□□□□ 0.61
PKD1-225ENST00000562297 ACER1Q8TDN7 264 aa18.84■□□□□ 0.61
PKD1-225ENST00000562297 SCAF8Q9UPN6 1271 aaKnown RBP18.84■□□□□ 0.61
PKD1-225ENST00000562297 TMX2Q9Y320 296 aa18.84■□□□□ 0.61
PKD1-225ENST00000562297 BIN1O00499 593 aa18.83■□□□□ 0.61
PKD1-225ENST00000562297 EDIL3O43854 480 aa18.83■□□□□ 0.61
PKD1-225ENST00000562297 CAP2P40123 477 aa18.83■□□□□ 0.61
PKD1-225ENST00000562297 BTNL9Q6UXG8 535 aa18.83■□□□□ 0.61
PKD1-225ENST00000562297 SAMD7Q7Z3H4 446 aa18.83■□□□□ 0.61
PKD1-225ENST00000562297 CEP57L1Q8IYX8 460 aa18.83■□□□□ 0.61
PKD1-225ENST00000562297 CNOT7Q9UIV1 285 aaKnown RBP18.83■□□□□ 0.61
PKD1-225ENST00000562297 ASTN2O75129 1339 aaPredicted RBP18.83■□□□□ 0.6
PKD1-225ENST00000562297 BMP3P12645 472 aa18.83■□□□□ 0.6
PKD1-225ENST00000562297 TNNI2P48788 182 aa18.83■□□□□ 0.6
PKD1-225ENST00000562297 CDC37Q16543 378 aaPredicted RBP18.83■□□□□ 0.6
PKD1-225ENST00000562297 NT5DC1Q5TFE4 455 aa18.83■□□□□ 0.6
PKD1-225ENST00000562297 NEK8Q86SG6 692 aa18.83■□□□□ 0.6
PKD1-225ENST00000562297 TBCKQ8TEA7 893 aa18.83■□□□□ 0.6
PKD1-225ENST00000562297 ARHGEF10LQ9HCE6 1279 aa18.83■□□□□ 0.6
PKD1-225ENST00000562297 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.83■□□□□ 0.6
PKD1-225ENST00000562297 PCDHA5Q9Y5H7 936 aa18.83■□□□□ 0.6
PKD1-225ENST00000562297 GJA3Q9Y6H8 435 aa18.83■□□□□ 0.6
PKD1-225ENST00000562297 PHF20L1A8MW92 1017 aa18.82■□□□□ 0.6
PKD1-225ENST00000562297 ESPNB1AK53 854 aa18.82■□□□□ 0.6
PKD1-225ENST00000562297 LAD1O00515 517 aa18.82■□□□□ 0.6
PKD1-225ENST00000562297 LONP1P36776 959 aaKnown RBP18.82■□□□□ 0.6
PKD1-225ENST00000562297 POSTNQ15063 836 aa18.82■□□□□ 0.6
PKD1-225ENST00000562297 HS1BP3Q53T59 392 aa18.82■□□□□ 0.6
PKD1-225ENST00000562297 BPIFA3Q9BQP9 254 aa18.82■□□□□ 0.6
PKD1-225ENST00000562297 SLFN14P0C7P3 912 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 PRPHP41219 470 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 TNFAIP1Q13829 316 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 E2F4Q16254 413 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 TBC1D10BQ4KMP7 808 aaPredicted RBP18.81■□□□□ 0.6
PKD1-225ENST00000562297 SH3RF1Q7Z6J0 888 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 TMEM232C9JQI7 657 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 PRR29P0C7W0 189 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 SARSP49591 514 aaKnown RBP18.81■□□□□ 0.6
PKD1-225ENST00000562297 ORC2Q13416 577 aaPredicted RBP18.81■□□□□ 0.6
PKD1-225ENST00000562297 LETM2Q2VYF4 491 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 SYDE2Q5VT97 1194 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 KANK3Q6NY19 840 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 GRAMD1CQ8IYS0 662 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 SPICE1Q8N0Z3 855 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 SPATA20Q8TB22 786 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 CUL5Q93034 780 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 DHX58Q96C10 678 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 NAT10Q9H0A0 1025 aaKnown RBP18.81■□□□□ 0.6
PKD1-225ENST00000562297 SPON1Q9HCB6 807 aa18.81■□□□□ 0.6
PKD1-225ENST00000562297 CCNT1O60563 726 aaKnown RBP18.8■□□□□ 0.6
PKD1-225ENST00000562297 ZRSR1Q15695 479 aaKnown RBP18.8■□□□□ 0.6
PKD1-225ENST00000562297 UBE2SQ16763 222 aa18.8■□□□□ 0.6
PKD1-225ENST00000562297 HOOK1Q9UJC3 728 aaKnown RBP18.8■□□□□ 0.6
PKD1-225ENST00000562297 PCDHA1Q9Y5I3 950 aa18.8■□□□□ 0.6
PKD1-225ENST00000562297 BMP6P22004 513 aa18.79■□□□□ 0.6
PKD1-225ENST00000562297 DTHD1Q6ZMT9 781 aa18.79■□□□□ 0.6
PKD1-225ENST00000562297 PSTPIP2Q9H939 334 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms