RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 TDO2P48775 406 aa12.25□□□□□ -0.45
BBS4-205ENST00000562219 GJA9P57773 515 aa12.25□□□□□ -0.45
BBS4-205ENST00000562219 PPIGQ13427 754 aaKnown RBP eCLIP12.25□□□□□ -0.45
BBS4-205ENST00000562219 GRIN2CQ14957 1233 aa12.25□□□□□ -0.45
BBS4-205ENST00000562219 ARMCX2Q7L311 632 aa12.25□□□□□ -0.45
BBS4-205ENST00000562219 GMCL1P1Q8NEA9 526 aa12.25□□□□□ -0.45
BBS4-205ENST00000562219 CHST13Q8NET6 341 aa12.25□□□□□ -0.45
BBS4-205ENST00000562219 SYMPKQ92797 1274 aaKnown RBP12.25□□□□□ -0.45
BBS4-205ENST00000562219 OSBP2Q969R2 916 aa12.25□□□□□ -0.45
BBS4-205ENST00000562219 MKL1Q969V6 931 aa12.25□□□□□ -0.45
BBS4-205ENST00000562219 TIFAQ96CG3 184 aa12.25□□□□□ -0.45
BBS4-205ENST00000562219 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.25□□□□□ -0.455e-7■□□□□ 10.6
BBS4-205ENST00000562219 ZNF576Q9H609 170 aa12.25□□□□□ -0.45
BBS4-205ENST00000562219 RAVER2Q9HCJ3 691 aaKnown RBP12.25□□□□□ -0.45
BBS4-205ENST00000562219 EPB41L4AQ9HCS5 686 aaPredicted RBP12.25□□□□□ -0.45
BBS4-205ENST00000562219 A0A0U1RQG5 324 aaPredicted RBP12.24□□□□□ -0.45
BBS4-205ENST00000562219 RNF113AO15541 343 aaKnown RBP12.24□□□□□ -0.45
BBS4-205ENST00000562219 GPAA1O43292 621 aa12.24□□□□□ -0.45
BBS4-205ENST00000562219 PRDM1O75626 825 aa12.24□□□□□ -0.45
BBS4-205ENST00000562219 TTLL1O95922 423 aa12.24□□□□□ -0.45
BBS4-205ENST00000562219 CDK7P50613 346 aa12.24□□□□□ -0.45
BBS4-205ENST00000562219 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
BBS4-205ENST00000562219 MUC3AQ02505 3323 aa12.24□□□□□ -0.45
BBS4-205ENST00000562219 GNASQ5JWF2 1037 aa12.24□□□□□ -0.45
BBS4-205ENST00000562219 CCDC144CPQ8IYA2 1237 aa12.24□□□□□ -0.45
BBS4-205ENST00000562219 ZNF444Q8N0Y2 327 aaPredicted RBP12.24□□□□□ -0.45
BBS4-205ENST00000562219 LRRC47Q8N1G4 583 aaKnown RBP12.24□□□□□ -0.45
BBS4-205ENST00000562219 HOMER2Q9NSB8 354 aa12.24□□□□□ -0.45
BBS4-205ENST00000562219 MTMR4Q9NYA4 1195 aa12.24□□□□□ -0.45
BBS4-205ENST00000562219 M0R2C6 588 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 ARVCFO00192 962 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 TLR3O15455 904 aaKnown RBP12.23□□□□□ -0.45
BBS4-205ENST00000562219 APPP05067 770 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 FDX1P10109 184 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 STAT2P52630 851 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 NKX3-2P78367 333 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 TMEM240Q5SV17 173 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 RASIP1Q5U651 963 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 PSRC1Q6PGN9 363 aaPredicted RBP12.23□□□□□ -0.45
BBS4-205ENST00000562219 FAM126BQ8IXS8 530 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 TMEM199Q8N511 208 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 USP38Q8NB14 1042 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 VTI1AQ96AJ9 217 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 KATNBL1Q9H079 304 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 ACAD9Q9H845 621 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 TANC1Q9C0D5 1861 aa12.23□□□□□ -0.45
BBS4-205ENST00000562219 CHD7Q9P2D1 2997 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 CTAGE5O15320 804 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 TSPY3P0CV98 308 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 TSPY8P0CW00 308 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 BMP3P12645 472 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 CSF2RAP15509 400 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 PDE4BQ07343 736 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 LRRFIP1Q32MZ4 808 aaKnown RBP12.22□□□□□ -0.45
BBS4-205ENST00000562219 TSHZ3Q63HK5 1081 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 SLFN13Q68D06 897 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 C16orf59Q7L2K0 433 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 FAM133AQ8N9E0 248 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 PBX4Q9BYU1 374 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 PPP1R12CQ9BZL4 782 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 PRDM6Q9NQX0 595 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 RCAN3Q9UKA8 241 aa12.22□□□□□ -0.45
BBS4-205ENST00000562219 SCN5AQ14524 2016 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 PATL2C9JE40 543 aaKnown RBP12.21□□□□□ -0.45
BBS4-205ENST00000562219 TMEM232C9JQI7 657 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 CD4P01730 458 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 SLC3A2P08195 630 aaKnown RBP12.21□□□□□ -0.45
BBS4-205ENST00000562219 PBX2P40425 430 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 CNTN2Q02246 1040 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 TNFAIP2Q03169 654 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 TJAP1Q5JTD0 557 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 CCDC129Q6ZRS4 1044 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 NOL8Q76FK4 1167 aaKnown RBP12.21□□□□□ -0.45
BBS4-205ENST00000562219 FAM160B2Q86V87 743 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 IFNL3Q8IZI9 196 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 NEDD1Q8NHV4 660 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 GMCL1Q96IK5 515 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 GAS2L1Q99501 681 aaPredicted RBP12.21□□□□□ -0.45
BBS4-205ENST00000562219 NACAP1Q9BZK3 213 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 A1CFQ9NQ94 594 aaKnown RBP12.21□□□□□ -0.45
BBS4-205ENST00000562219 RNF146Q9NTX7 359 aa12.21□□□□□ -0.45
BBS4-205ENST00000562219 ISY1Q9ULR0 285 aaKnown RBP12.21□□□□□ -0.45
BBS4-205ENST00000562219 REV3LO60673 3130 aa12.21□□□□□ -0.46
BBS4-205ENST00000562219 ASTN1O14525 1302 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 ZNF536O15090 1300 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 ASB14A6NK59 587 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 GRXCR1A8MXD5 290 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 CABYRO75952 493 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 ACRP10323 421 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 SLC1A4P43007 532 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 BEX3Q00994 111 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 IKQ13123 557 aaPredicted RBP12.2□□□□□ -0.46
BBS4-205ENST00000562219 FSCN1Q16658 493 aaKnown RBP12.2□□□□□ -0.46
BBS4-205ENST00000562219 TKFCQ3LXA3 575 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 C20orf194Q5TEA3 1177 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 ZNF365Q70YC5 407 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 TLK2Q86UE8 772 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 CHURC1Q8WUH1 139 aa12.2□□□□□ -0.46
BBS4-205ENST00000562219 MTIF3Q9H2K0 278 aaKnown RBP12.2□□□□□ -0.46
BBS4-205ENST00000562219 DCTPP1Q9H773 170 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms