RNA–Protein interactions for RNA: ENST00000562119.5

PDXDC1-207, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5

Gene PDXDC1, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-207ENST00000562119 ARMCX2Q7L311 632 aa24.14■■□□□ 1.45
PDXDC1-207ENST00000562119 OTOP2Q7RTS6 562 aa24.14■■□□□ 1.45
PDXDC1-207ENST00000562119 AMOTL1Q8IY63 956 aa24.14■■□□□ 1.45
PDXDC1-207ENST00000562119 CPXCR1Q8N123 301 aa24.14■■□□□ 1.45
PDXDC1-207ENST00000562119 ZBED9Q6R2W3 1325 aa24.13■■□□□ 1.45
PDXDC1-207ENST00000562119 RABGGTBP53611 331 aa24.13■■□□□ 1.45
PDXDC1-207ENST00000562119 NKX3-2P78367 333 aa24.13■■□□□ 1.45
PDXDC1-207ENST00000562119 PRPF38AQ8NAV1 312 aaKnown RBP24.13■■□□□ 1.45
PDXDC1-207ENST00000562119 SLC43A3Q8NBI5 491 aa24.13■■□□□ 1.45
PDXDC1-207ENST00000562119 HIPK3Q9H422 1215 aa24.13■■□□□ 1.45
PDXDC1-207ENST00000562119 RAVER2Q9HCJ3 691 aaKnown RBP24.13■■□□□ 1.45
PDXDC1-207ENST00000562119 PAG1Q9NWQ8 432 aa24.13■■□□□ 1.45
PDXDC1-207ENST00000562119 ASTN1O14525 1302 aa24.12■■□□□ 1.45
PDXDC1-207ENST00000562119 TRANK1O15050 2925 aa24.12■■□□□ 1.45
PDXDC1-207ENST00000562119 F5H6K3 240 aa24.12■■□□□ 1.45
PDXDC1-207ENST00000562119 NDUFB10O96000 172 aa24.12■■□□□ 1.45
PDXDC1-207ENST00000562119 MYOGP15173 224 aa24.12■■□□□ 1.45
PDXDC1-207ENST00000562119 KLRC3Q07444 240 aa24.12■■□□□ 1.45
PDXDC1-207ENST00000562119 CXCL17Q6UXB2 119 aa24.12■■□□□ 1.45
PDXDC1-207ENST00000562119 CCDC144CPQ8IYA2 1237 aa24.12■■□□□ 1.45
PDXDC1-207ENST00000562119 ANKRD35Q8N283 1001 aa24.12■■□□□ 1.45
PDXDC1-207ENST00000562119 MTIF3Q9H2K0 278 aaKnown RBP24.12■■□□□ 1.45
PDXDC1-207ENST00000562119 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.11■■□□□ 1.45
PDXDC1-207ENST00000562119 HSP90AB4PQ58FF6 505 aa24.11■■□□□ 1.45
PDXDC1-207ENST00000562119 CLASRPQ8N2M8 674 aaKnown RBP24.11■■□□□ 1.45
PDXDC1-207ENST00000562119 MICALL1Q8N3F8 863 aa24.11■■□□□ 1.45
PDXDC1-207ENST00000562119 SLC4A4Q9Y6R1 1079 aa24.11■■□□□ 1.45
PDXDC1-207ENST00000562119 GBF1Q92538 1859 aa24.11■■□□□ 1.45
PDXDC1-207ENST00000562119 GRIN2DO15399 1336 aa24.1■■□□□ 1.45
PDXDC1-207ENST00000562119 KCNQ1P51787 676 aa24.1■■□□□ 1.45
PDXDC1-207ENST00000562119 CCL23P55773 120 aa24.1■■□□□ 1.45
PDXDC1-207ENST00000562119 PPP2R2DQ66LE6 453 aa24.1■■□□□ 1.45
PDXDC1-207ENST00000562119 VWCEQ96DN2 955 aa24.1■■□□□ 1.45
PDXDC1-207ENST00000562119 C1QTNF1Q9BXJ1 281 aa24.1■■□□□ 1.45
PDXDC1-207ENST00000562119 BCL11AQ9H165 835 aa24.1■■□□□ 1.45
PDXDC1-207ENST00000562119 WNT8AQ9H1J5 351 aa24.1■■□□□ 1.45
PDXDC1-207ENST00000562119 TSPYL2Q9H2G4 693 aaPredicted RBP24.1■■□□□ 1.45
PDXDC1-207ENST00000562119 BOLA2Q9H3K6 86 aa24.1■■□□□ 1.45
PDXDC1-207ENST00000562119 SLC38A10Q9HBR0 1119 aa24.1■■□□□ 1.45
PDXDC1-207ENST00000562119 NYAP2Q9P242 653 aa24.1■■□□□ 1.45
PDXDC1-207ENST00000562119 GREB1LQ9C091 1923 aaPredicted RBP24.1■■□□□ 1.45
PDXDC1-207ENST00000562119 ZBED4O75132 1171 aa24.09■■□□□ 1.45
PDXDC1-207ENST00000562119 IFIT2P09913 472 aaKnown RBP24.09■■□□□ 1.45
PDXDC1-207ENST00000562119 RASA1P20936 1047 aa24.09■■□□□ 1.45
PDXDC1-207ENST00000562119 PTGS1P23219 599 aa24.09■■□□□ 1.45
PDXDC1-207ENST00000562119 HOXD11P31277 338 aaPredicted RBP24.09■■□□□ 1.45
PDXDC1-207ENST00000562119 KIFC2Q96AC6 838 aa24.09■■□□□ 1.45
PDXDC1-207ENST00000562119 DDRGK1Q96HY6 314 aa24.09■■□□□ 1.45
PDXDC1-207ENST00000562119 NOC4LQ9BVI4 516 aaKnown RBP24.09■■□□□ 1.45
PDXDC1-207ENST00000562119 MCM3APO60318 1980 aa24.09■■□□□ 1.45
PDXDC1-207ENST00000562119 CNTN2Q02246 1040 aa24.08■■□□□ 1.45
PDXDC1-207ENST00000562119 ITGA7Q13683 1181 aa24.08■■□□□ 1.45
PDXDC1-207ENST00000562119 KIF1BPQ96EK5 621 aa24.08■■□□□ 1.45
PDXDC1-207ENST00000562119 TRPV6Q9H1D0 765 aa24.08■■□□□ 1.45
PDXDC1-207ENST00000562119 TCF20Q9UGU0 1960 aaKnown RBP24.08■■□□□ 1.45
PDXDC1-207ENST00000562119 TNFAIP2Q03169 654 aa24.07■■□□□ 1.44
PDXDC1-207ENST00000562119 UBE3CQ15386 1083 aa24.07■■□□□ 1.44
PDXDC1-207ENST00000562119 STK11IPQ8N1F8 1099 aa24.07■■□□□ 1.44
PDXDC1-207ENST00000562119 CHST13Q8NET6 341 aa24.07■■□□□ 1.44
PDXDC1-207ENST00000562119 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.07■■□□□ 1.448e-7■■□□□ 14.4
PDXDC1-207ENST00000562119 PUS7LQ9H0K6 701 aaKnown RBP24.07■■□□□ 1.44
PDXDC1-207ENST00000562119 FBXO40Q9UH90 709 aa24.07■■□□□ 1.44
PDXDC1-207ENST00000562119 GNEQ9Y223 722 aaKnown RBP24.07■■□□□ 1.44
PDXDC1-207ENST00000562119 CTDP1Q9Y5B0 961 aaPredicted RBP24.07■■□□□ 1.44
PDXDC1-207ENST00000562119 PCDHA11Q9Y5I1 949 aa24.07■■□□□ 1.44
PDXDC1-207ENST00000562119 SLC4A7Q9Y6M7 1214 aa24.07■■□□□ 1.44
PDXDC1-207ENST00000562119 B4GALT4O60513 344 aa24.06■■□□□ 1.44
PDXDC1-207ENST00000562119 NOL8Q76FK4 1167 aaKnown RBP24.06■■□□□ 1.44
PDXDC1-207ENST00000562119 HOMER2Q9NSB8 354 aa24.06■■□□□ 1.44
PDXDC1-207ENST00000562119 ARPP21Q9UBL0 812 aaPredicted RBP24.06■■□□□ 1.44
PDXDC1-207ENST00000562119 CLIP2Q9UDT6 1046 aa24.06■■□□□ 1.44
PDXDC1-207ENST00000562119 RFXAPO00287 272 aa24.05■■□□□ 1.44
PDXDC1-207ENST00000562119 CABYRO75952 493 aa24.05■■□□□ 1.44
PDXDC1-207ENST00000562119 ATP5JP18859 108 aa24.05■■□□□ 1.44
PDXDC1-207ENST00000562119 FSCN1Q16658 493 aaKnown RBP24.05■■□□□ 1.44
PDXDC1-207ENST00000562119 TLK2Q86UE8 772 aa24.05■■□□□ 1.44
PDXDC1-207ENST00000562119 FAM133AQ8N9E0 248 aa24.05■■□□□ 1.44
PDXDC1-207ENST00000562119 HAUS7Q99871 368 aa24.05■■□□□ 1.44
PDXDC1-207ENST00000562119 EPHX3Q9H6B9 360 aa24.05■■□□□ 1.44
PDXDC1-207ENST00000562119 DDX49Q9Y6V7 483 aaKnown RBP24.05■■□□□ 1.44
PDXDC1-207ENST00000562119 IGKV6D-41A0A0C4DH26 115 aa24.04■■□□□ 1.44
PDXDC1-207ENST00000562119 SOWAHBA6NEL2 793 aa24.04■■□□□ 1.44
PDXDC1-207ENST00000562119 ERC2O15083 957 aa24.04■■□□□ 1.44
PDXDC1-207ENST00000562119 OAZ1P54368 228 aa24.04■■□□□ 1.44
PDXDC1-207ENST00000562119 PSMC6P62333 389 aa24.04■■□□□ 1.44
PDXDC1-207ENST00000562119 SKIV2LQ15477 1246 aaKnown RBP24.04■■□□□ 1.44
PDXDC1-207ENST00000562119 AAK1Q2M2I8 961 aa24.04■■□□□ 1.44
PDXDC1-207ENST00000562119 SCLYQ96I15 445 aa24.04■■□□□ 1.44
PDXDC1-207ENST00000562119 FEM1BQ9UK73 627 aa24.04■■□□□ 1.44
PDXDC1-207ENST00000562119 ATP2A2P16615 1042 aaKnown RBP24.03■■□□□ 1.44
PDXDC1-207ENST00000562119 SMPD1P17405 629 aa24.03■■□□□ 1.44
PDXDC1-207ENST00000562119 SBK1Q52WX2 424 aa24.03■■□□□ 1.44
PDXDC1-207ENST00000562119 TMEM63BQ5T3F8 832 aa24.03■■□□□ 1.44
PDXDC1-207ENST00000562119 RPUSD2Q8IZ73 545 aaKnown RBP24.03■■□□□ 1.44
PDXDC1-207ENST00000562119 PANK1Q8TE04 598 aa24.03■■□□□ 1.44
PDXDC1-207ENST00000562119 AGBL1Q96MI9 1066 aa24.03■■□□□ 1.44
PDXDC1-207ENST00000562119 LRFN3Q9BTN0 628 aa24.03■■□□□ 1.44
PDXDC1-207ENST00000562119 MKNK2Q9HBH9 465 aa24.03■■□□□ 1.44
PDXDC1-207ENST00000562119 MTCH2Q9Y6C9 303 aa24.03■■□□□ 1.44
PDXDC1-207ENST00000562119 ZBBXA8MT70 800 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms