RNA–Protein interactions for RNA: ENST00000561879.1

VAC14-203, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 2

Gene VAC14, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-203ENST00000561879 WDR90Q96KV7 1748 aa12.14□□□□□ -0.47
VAC14-203ENST00000561879 CNTNAP5Q8WYK1 1306 aa12.14□□□□□ -0.47
VAC14-203ENST00000561879 A0A1W2PRG0 241 aa12.14□□□□□ -0.47
VAC14-203ENST00000561879 VPS37CA5D8V6 355 aaPredicted RBP12.14□□□□□ -0.47
VAC14-203ENST00000561879 PPP1R12BO60237 982 aaPredicted RBP12.14□□□□□ -0.47
VAC14-203ENST00000561879 USP2O75604 605 aaPredicted RBP12.14□□□□□ -0.47
VAC14-203ENST00000561879 SLC1A4P43007 532 aa12.14□□□□□ -0.47
VAC14-203ENST00000561879 PFKFB3Q16875 520 aaPredicted RBP12.14□□□□□ -0.47
VAC14-203ENST00000561879 SHROOM1Q2M3G4 852 aaPredicted RBP12.14□□□□□ -0.47
VAC14-203ENST00000561879 ATL3Q6DD88 541 aa12.14□□□□□ -0.47
VAC14-203ENST00000561879 CLEC10AQ8IUN9 316 aa12.14□□□□□ -0.47
VAC14-203ENST00000561879 SCYL3Q8IZE3 742 aa12.14□□□□□ -0.47
VAC14-203ENST00000561879 CMTR1Q8N1G2 835 aaKnown RBP12.14□□□□□ -0.47
VAC14-203ENST00000561879 CCDC82Q8N4S0 544 aa12.14□□□□□ -0.47
VAC14-203ENST00000561879 LIMD1Q9UGP4 676 aa12.14□□□□□ -0.47
VAC14-203ENST00000561879 UNCXA6NJT0 531 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 CYTH3O43739 400 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 PLA2G6O60733 806 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 DTNBO60941 627 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 BAG4O95429 457 aaKnown RBP12.13□□□□□ -0.47
VAC14-203ENST00000561879 NDUFB10O96000 172 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 SCG2P13521 617 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 PTMSP20962 102 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 NF2P35240 595 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 PRAMEF18Q5VWM3 479 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 KRT40Q6A162 431 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 BTNL9Q6UXG8 535 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 HOMEZQ8IX15 550 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.13□□□□□ -0.47
VAC14-203ENST00000561879 RRP36Q96EU6 259 aaKnown RBP12.13□□□□□ -0.47
VAC14-203ENST00000561879 KIAA1683Q9H0B3 1180 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 VCPKMTQ9H867 229 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 AS3MTQ9HBK9 375 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 PICK1Q9NRD5 415 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 MYH8P13535 1937 aa12.13□□□□□ -0.47
VAC14-203ENST00000561879 hCG_1984214I3L0E3 225 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 PPFIA3O75145 1194 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 GOLGA8HP0CJ92 632 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 BMP3P12645 472 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 U2AF2P26368 475 aaKnown RBP eCLIP12.12□□□□□ -0.473e-7■■□□□ 12.8
VAC14-203ENST00000561879 INPP5BP32019 993 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 MCM4P33991 863 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 RESTQ13127 1097 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 SAFBQ15424 915 aaKnown RBP eCLIP12.12□□□□□ -0.47
VAC14-203ENST00000561879 NFKBIBQ15653 356 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 MAP3K11Q16584 847 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 SLC35G1Q2M3R5 365 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 GALNT17Q6IS24 598 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 BRAPQ7Z569 592 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 ZNF713Q8N859 430 aaPredicted RBP12.12□□□□□ -0.47
VAC14-203ENST00000561879 ACER1Q8TDN7 264 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 LPAR1Q92633 364 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 MTMR8Q96EF0 704 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 WRNIP1Q96S55 665 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 KIAA1468Q9P260 1216 aa12.12□□□□□ -0.47
VAC14-203ENST00000561879 C19orf81C9J6K1 198 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 ADM5C9JUS6 153 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 GOLGA6L22H0YM25 854 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 MMP1P03956 469 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 PTPRAP18433 802 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 CALML3P27482 149 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 ECE1P42892 770 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 IREB2P48200 963 aaKnown RBP12.11□□□□□ -0.47
VAC14-203ENST00000561879 PSEN2P49810 448 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 USP14P54578 494 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 EAPPQ56P03 285 aaPredicted RBP12.11□□□□□ -0.47
VAC14-203ENST00000561879 ADGRF4Q8IZF3 695 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 CDCA5Q96FF9 252 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 AIFM3Q96NN9 605 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 PHF20Q9BVI0 1012 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 FOXP1Q9H334 677 aaPredicted RBP12.11□□□□□ -0.47
VAC14-203ENST00000561879 RRAGCQ9HB90 399 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 BARHL2Q9NY43 387 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 SEC63Q9UGP8 760 aaKnown RBP12.11□□□□□ -0.47
VAC14-203ENST00000561879 MTMR7Q9Y216 660 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 UTRNP46939 3433 aa12.11□□□□□ -0.47
VAC14-203ENST00000561879 FRMPD2Q68DX3 1309 aaPredicted RBP12.11□□□□□ -0.47
VAC14-203ENST00000561879 SSC5DA1L4H1 1573 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 PNMA6FA0A0J9YX94 578 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 A6NJR5 290 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 USP17L10C9JJH3 530 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 UBE2Q2LH0YL09 131 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 KIF23Q02241 960 aaPredicted RBP12.1□□□□□ -0.47
VAC14-203ENST00000561879 TRAF1Q13077 416 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 CCDC96Q2M329 555 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 FOXD4L5Q5VV16 416 aaPredicted RBP12.1□□□□□ -0.47
VAC14-203ENST00000561879 FAM160B2Q86V87 743 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 LDHDQ86WU2 507 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 TEX2Q8IWB9 1127 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 ZNF280CQ8ND82 737 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 CCDC12Q8WUD4 166 aaPredicted RBP12.1□□□□□ -0.47
VAC14-203ENST00000561879 CHURC1Q8WUH1 139 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 FOXD4L4Q8WXT5 416 aaPredicted RBP12.1□□□□□ -0.47
VAC14-203ENST00000561879 ZKSCAN4Q969J2 545 aaPredicted RBP12.1□□□□□ -0.47
VAC14-203ENST00000561879 UBA5Q9GZZ9 404 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 JMJD4Q9H9V9 463 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 CFAP45Q9UL16 551 aa12.1□□□□□ -0.47
VAC14-203ENST00000561879 ZBTB5O15062 677 aa12.09□□□□□ -0.47
VAC14-203ENST00000561879 SPTLC1O15269 473 aa12.09□□□□□ -0.47
VAC14-203ENST00000561879 RFC5P40937 340 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms