RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 NCLP19338 710 aaKnown RBP7.55□□□□□ -1.2
CAPN3-210ENST00000561817 CACNB3P54284 484 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 CXCL9Q07325 125 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 MCM6Q14566 821 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 PTPAQ15257 358 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 PUS10Q3MIT2 529 aaKnown RBP7.55□□□□□ -1.2
CAPN3-210ENST00000561817 C9orf131Q5VYM1 1079 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 STAG2Q8N3U4 1231 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 LARGE2Q8N3Y3 721 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 LINC00301Q8NCQ3 95 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 WASF1Q92558 559 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 TNFRSF25Q93038 417 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 CEP95Q96GE4 821 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 SPATA32Q96LK8 384 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 ZNF396Q96N95 335 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-210ENST00000561817 PHF20Q9BVI0 1012 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 POLR3EQ9NVU0 708 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 MTMR4Q9NYA4 1195 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 SWAP70Q9UH65 585 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 PGAP2Q9UHJ9 254 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 SERPINB13Q9UIV8 391 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 CFAP45Q9UL16 551 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 KCNJ14Q9UNX9 436 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 CLIC4Q9Y696 253 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 CNTNAP1P78357 1384 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 SRCAPQ6ZRS2 3230 aa7.55□□□□□ -1.2
CAPN3-210ENST00000561817 BAZ2BQ9UIF8 2168 aaKnown RBP7.54□□□□□ -1.2
CAPN3-210ENST00000561817 ADAMTS3O15072 1205 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 YEATS4O95619 227 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 TOP1P11387 765 aaKnown RBP7.54□□□□□ -1.2
CAPN3-210ENST00000561817 XRCC6P12956 609 aaKnown RBP eCLIP7.54□□□□□ -1.2
CAPN3-210ENST00000561817 YY1P25490 414 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 TOB1P50616 345 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-210ENST00000561817 RRP1BQ14684 758 aaKnown RBP7.54□□□□□ -1.2
CAPN3-210ENST00000561817 PFKFB3Q16875 520 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-210ENST00000561817 AXDND1Q5T1B0 1012 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-210ENST00000561817 CCDC183Q5T5S1 534 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 TATDN1Q6P1N9 297 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 LIAT1Q6ZQX7 453 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 RBM43Q6ZSC3 357 aaKnown RBP7.54□□□□□ -1.2
CAPN3-210ENST00000561817 TRIM67Q6ZTA4 783 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 RASGRP2Q7LDG7 609 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 SIAH1Q8IUQ4 282 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 TRIM22Q8IYM9 498 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 AGBL3Q8NEM8 1001 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 ENGASEQ8NFI3 743 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 SPSB2Q99619 263 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 FUCA2Q9BTY2 467 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 DHX36Q9H2U1 1008 aaKnown RBP7.54□□□□□ -1.2
CAPN3-210ENST00000561817 FOXP1Q9H334 677 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-210ENST00000561817 TDRD3Q9H7E2 651 aaKnown RBP7.54□□□□□ -1.2
CAPN3-210ENST00000561817 KAT14Q9H8E8 782 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 GOPCQ9HD26 462 aa7.54□□□□□ -1.2
CAPN3-210ENST00000561817 MORC2Q9Y6X9 1032 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-210ENST00000561817 A0A1W2PQ27 194 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 A0A1W2PQ64 194 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 A0A1W2PQD8 194 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 hCG_1642624A0A1W2PR95 340 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 GOLGA6L3A6NEY3 463 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 BTBD18B2RXH4 712 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 SCG2P13521 617 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 SMARCA1P28370 1054 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 KIF5BP33176 963 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 ZNF280AP59817 542 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-210ENST00000561817 JAG1P78504 1218 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 TCP10Q12799 353 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 SNW1Q13573 536 aaKnown RBP7.53□□□□□ -1.2
CAPN3-210ENST00000561817 SLC39A14Q15043 492 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 SHROOM1Q2M3G4 852 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-210ENST00000561817 EARS2Q5JPH6 523 aaKnown RBP7.53□□□□□ -1.2
CAPN3-210ENST00000561817 ZNF697Q5TEC3 545 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 FKBP1CQ5VVH2 108 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 ANO1Q5XXA6 986 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 LRSAM1Q6UWE0 723 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 GPIHBP1Q8IV16 184 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 FOXP4Q8IVH2 680 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-210ENST00000561817 NOSTRINQ8IVI9 506 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 SULF1Q8IWU6 871 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 NIM1KQ8IY84 436 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 DIS3L2Q8IYB7 885 aaKnown RBP7.53□□□□□ -1.2
CAPN3-210ENST00000561817 CTCFLQ8NI51 663 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-210ENST00000561817 MKL1Q969V6 931 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 CCDC17Q96LX7 622 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 SPZ1Q9BXG8 430 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 GOLPH3LQ9H4A5 285 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 VPS54Q9P1Q0 977 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 PI4KBQ9UBF8 816 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 ZNF70Q9UC06 446 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-210ENST00000561817 PCDHA7Q9UN72 937 aa7.53□□□□□ -1.2
CAPN3-210ENST00000561817 GOLGB1Q14789 3259 aaKnown RBP7.53□□□□□ -1.2
CAPN3-210ENST00000561817 FAM237AA0A1B0GTK4 181 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 SHTN1A0MZ66 631 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 SYCE3A1L190 88 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 USP17L5A8MUK1 530 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 M0R2N6 131 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 FZD9O00144 591 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 HLA-DOAP06340 250 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 PDHBP11177 359 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 LMNB1P20700 586 aa7.52□□□□□ -1.21
CAPN3-210ENST00000561817 GNAQP50148 359 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms