RNA–Protein interactions for RNA: ENST00000561667.1

FANCA-207, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-207ENST00000561667 VCANP13611 3396 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.83□□□□□ -0.2
FANCA-207ENST00000561667 BMP3P12645 472 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 RAG1P15918 1043 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 BEX3Q00994 111 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 IKQ13123 557 aaPredicted RBP13.83□□□□□ -0.2
FANCA-207ENST00000561667 ACVR2BQ13705 512 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 ZMYM1Q5SVZ6 1142 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 VPS53Q5VIR6 699 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 FAM109BQ6ICB4 259 aaPredicted RBP13.83□□□□□ -0.2
FANCA-207ENST00000561667 CCSAPQ6IQ19 270 aaPredicted RBP13.83□□□□□ -0.2
FANCA-207ENST00000561667 CCDC174Q6PII3 467 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 MAMDC4Q6UXC1 1216 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 ARMCX2Q7L311 632 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.83□□□□□ -0.2
FANCA-207ENST00000561667 CCDC144CPQ8IYA2 1237 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 GMCL1P1Q8NEA9 526 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 KLHDC9Q8NEP7 349 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 NEDD1Q8NHV4 660 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 MKL1Q969V6 931 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 RNPC3Q96LT9 517 aaKnown RBP13.83□□□□□ -0.2
FANCA-207ENST00000561667 PURBQ96QR8 312 aaKnown RBP13.83□□□□□ -0.2
FANCA-207ENST00000561667 SEMA6BQ9H3T3 888 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 FEM1BQ9UK73 627 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 LRRC37A2A6NM11 1700 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 SYNGAP1Q96PV0 1343 aa13.83□□□□□ -0.2
FANCA-207ENST00000561667 ATP2A1O14983 1001 aa13.82□□□□□ -0.2
FANCA-207ENST00000561667 KIAA0355O15063 1070 aa13.82□□□□□ -0.2
FANCA-207ENST00000561667 TMEM63BQ5T3F8 832 aa13.82□□□□□ -0.2
FANCA-207ENST00000561667 VTI1AQ96AJ9 217 aa13.82□□□□□ -0.2
FANCA-207ENST00000561667 COL25A1Q9BXS0 654 aaPredicted RBP13.82□□□□□ -0.2
FANCA-207ENST00000561667 NACAP1Q9BZK3 213 aa13.82□□□□□ -0.2
FANCA-207ENST00000561667 IL17RBQ9NRM6 502 aa13.82□□□□□ -0.2
FANCA-207ENST00000561667 ASTN1O14525 1302 aa13.82□□□□□ -0.2
FANCA-207ENST00000561667 ZNF536O15090 1300 aa13.82□□□□□ -0.2
FANCA-207ENST00000561667 TTC41PQ6P2S7 1318 aa13.82□□□□□ -0.2
FANCA-207ENST00000561667 PLIN4Q96Q06 1357 aa13.82□□□□□ -0.2
FANCA-207ENST00000561667 CTAGE5O15320 804 aa13.81□□□□□ -0.2
FANCA-207ENST00000561667 DUSP11O75319 330 aaKnown RBP13.81□□□□□ -0.2
FANCA-207ENST00000561667 ASGR1P07306 291 aa13.81□□□□□ -0.2
FANCA-207ENST00000561667 ALAS1P13196 640 aa13.81□□□□□ -0.2
FANCA-207ENST00000561667 MX1P20591 662 aa13.81□□□□□ -0.2
FANCA-207ENST00000561667 FPGSQ05932 587 aa13.81□□□□□ -0.2
FANCA-207ENST00000561667 PDE4BQ07343 736 aa13.81□□□□□ -0.2
FANCA-207ENST00000561667 MUM1L1Q5H9M0 696 aa13.81□□□□□ -0.2
FANCA-207ENST00000561667 EEPD1Q7L9B9 569 aa13.81□□□□□ -0.2
FANCA-207ENST00000561667 PPP1R12CQ9BZL4 782 aa13.81□□□□□ -0.2
FANCA-207ENST00000561667 KATNBL1Q9H079 304 aa13.81□□□□□ -0.2
FANCA-207ENST00000561667 A1CFQ9NQ94 594 aaKnown RBP13.81□□□□□ -0.2
FANCA-207ENST00000561667 RNF146Q9NTX7 359 aa13.81□□□□□ -0.2
FANCA-207ENST00000561667 STX8Q9UNK0 236 aa13.81□□□□□ -0.2
FANCA-207ENST00000561667 SOWAHBA6NEL2 793 aa13.8□□□□□ -0.2
FANCA-207ENST00000561667 GRXCR1A8MXD5 290 aa13.8□□□□□ -0.2
FANCA-207ENST00000561667 DCDC2CA8MYV0 355 aa13.8□□□□□ -0.2
FANCA-207ENST00000561667 ERC2O15083 957 aa13.8□□□□□ -0.2
FANCA-207ENST00000561667 SLC1A4P43007 532 aa13.8□□□□□ -0.2
FANCA-207ENST00000561667 STAT2P52630 851 aa13.8□□□□□ -0.2
FANCA-207ENST00000561667 GNASQ5JWF2 1037 aa13.8□□□□□ -0.2
FANCA-207ENST00000561667 NOL8Q76FK4 1167 aaKnown RBP13.8□□□□□ -0.2
FANCA-207ENST00000561667 ANKRD33Q7Z3H0 272 aa13.8□□□□□ -0.2
FANCA-207ENST00000561667 CHST13Q8NET6 341 aa13.8□□□□□ -0.2
FANCA-207ENST00000561667 MAFAQ8NHW3 353 aaPredicted RBP13.8□□□□□ -0.2
FANCA-207ENST00000561667 TSEN34Q9BSV6 310 aaKnown RBP13.8□□□□□ -0.2
FANCA-207ENST00000561667 ZNF287Q9HBT7 754 aa13.8□□□□□ -0.2
FANCA-207ENST00000561667 PDGFCQ9NRA1 345 aa13.8□□□□□ -0.2
FANCA-207ENST00000561667 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.8□□□□□ -0.2
FANCA-207ENST00000561667 MYO9BQ13459 2157 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 GBF1Q92538 1859 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 TSPY2A6NKD2 308 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 RANBP6O60518 1105 aaKnown RBP13.79□□□□□ -0.2
FANCA-207ENST00000561667 ACRP10323 421 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 SLC16A2P36021 539 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 SMAD3P84022 425 aaKnown RBP13.79□□□□□ -0.2
FANCA-207ENST00000561667 ANKRD45Q5TZF3 282 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 TTBK2Q6IQ55 1244 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 C16orf59Q7L2K0 433 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 ZNF467Q7Z7K2 595 aaPredicted RBP13.79□□□□□ -0.2
FANCA-207ENST00000561667 FBXO16Q8IX29 292 aaPredicted RBP13.79□□□□□ -0.2
FANCA-207ENST00000561667 MSL3Q8N5Y2 521 aaKnown RBP13.79□□□□□ -0.2
FANCA-207ENST00000561667 FAM133AQ8N9E0 248 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 NUP133Q8WUM0 1156 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 STAG1Q8WVM7 1258 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 GLT1D1Q96MS3 346 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 TRERF1Q96PN7 1200 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.79□□□□□ -0.23e-11■□□□□ 10.3
FANCA-207ENST00000561667 ABHD16BQ9H3Z7 469 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 ACAD9Q9H845 621 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 TBX21Q9UL17 535 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 PRR12Q9ULL5 1215 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 SALL3Q9BXA9 1300 aa13.79□□□□□ -0.2
FANCA-207ENST00000561667 MOXD2PA6NHM9 499 aa13.78□□□□□ -0.2
FANCA-207ENST00000561667 RBAK-RBAKDNI3L0D1 243 aa13.78□□□□□ -0.2
FANCA-207ENST00000561667 SLC3A2P08195 630 aaKnown RBP13.78□□□□□ -0.2
FANCA-207ENST00000561667 CSF2RAP15509 400 aa13.78□□□□□ -0.2
FANCA-207ENST00000561667 OAZ1P54368 228 aa13.78□□□□□ -0.2
FANCA-207ENST00000561667 GJA9P57773 515 aa13.78□□□□□ -0.2
FANCA-207ENST00000561667 CCDC96Q2M329 555 aa13.78□□□□□ -0.2
FANCA-207ENST00000561667 RRP12Q5JTH9 1297 aaKnown RBP13.78□□□□□ -0.2
FANCA-207ENST00000561667 CXCL17Q6UXB2 119 aa13.78□□□□□ -0.2
FANCA-207ENST00000561667 GMCL1Q96IK5 515 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms