RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 LRRC41Q15345 812 aa29.95■■■□□ 2.39
NME3-202ENST00000561637 RRP12Q5JTH9 1297 aaKnown RBP29.95■■■□□ 2.39
NME3-202ENST00000561637 TEX13BQ9BXU2 312 aa29.95■■■□□ 2.39
NME3-202ENST00000561637 MTMR7Q9Y216 660 aa29.95■■■□□ 2.39
NME3-202ENST00000561637 TMEM232C9JQI7 657 aa29.94■■■□□ 2.38
NME3-202ENST00000561637 ZNF792Q3KQV3 632 aa29.94■■■□□ 2.38
NME3-202ENST00000561637 TBC1D10CQ8IV04 446 aa29.94■■■□□ 2.38
NME3-202ENST00000561637 SLC38A10Q9HBR0 1119 aa29.94■■■□□ 2.38
NME3-202ENST00000561637 TOMM22Q9NS69 142 aa29.94■■■□□ 2.38
NME3-202ENST00000561637 FEM1BQ9UK73 627 aa29.94■■■□□ 2.38
NME3-202ENST00000561637 SYNPO2Q9UMS6 1093 aa29.94■■■□□ 2.38
NME3-202ENST00000561637 PLXNA1Q9UIW2 1896 aa29.93■■■□□ 2.38
NME3-202ENST00000561637 FGRP09769 529 aa29.93■■■□□ 2.38
NME3-202ENST00000561637 FOSL2P15408 326 aa29.93■■■□□ 2.38
NME3-202ENST00000561637 TAL1P17542 331 aaPredicted RBP29.93■■■□□ 2.38
NME3-202ENST00000561637 EPHB4P54760 987 aa29.93■■■□□ 2.38
NME3-202ENST00000561637 SNAP25P60880 206 aa29.93■■■□□ 2.38
NME3-202ENST00000561637 TLE2Q04725 743 aa29.93■■■□□ 2.38
NME3-202ENST00000561637 KCTD2Q14681 263 aa29.93■■■□□ 2.38
NME3-202ENST00000561637 KCTD1Q719H9 257 aa29.93■■■□□ 2.38
NME3-202ENST00000561637 CWC27Q6UX04 472 aaKnown RBP29.92■■■□□ 2.38
NME3-202ENST00000561637 TTC28Q96AY4 2481 aa29.92■■■□□ 2.38
NME3-202ENST00000561637 MUC3AQ02505 3323 aa29.91■■■□□ 2.38
NME3-202ENST00000561637 ZBED4O75132 1171 aa29.91■■■□□ 2.38
NME3-202ENST00000561637 C1orf53Q5VUE5 145 aa29.91■■■□□ 2.38
NME3-202ENST00000561637 GMCL1Q96IK5 515 aa29.91■■■□□ 2.38
NME3-202ENST00000561637 IL25Q9H293 177 aa29.91■■■□□ 2.38
NME3-202ENST00000561637 SLC5A4Q9NY91 659 aa29.91■■■□□ 2.38
NME3-202ENST00000561637 ZMYM6O95789 1325 aa29.9■■■□□ 2.38
NME3-202ENST00000561637 ATP2A1O14983 1001 aa29.89■■■□□ 2.38
NME3-202ENST00000561637 SLC1A4P43007 532 aa29.89■■■□□ 2.38
NME3-202ENST00000561637 NOVP48745 357 aa29.89■■■□□ 2.38
NME3-202ENST00000561637 TICAM2Q86XR7 235 aa29.89■■■□□ 2.38
NME3-202ENST00000561637 LENG1Q96BZ8 264 aaPredicted RBP29.89■■■□□ 2.38
NME3-202ENST00000561637 HOMER2Q9NSB8 354 aa29.89■■■□□ 2.38
NME3-202ENST00000561637 GSPT1P15170 499 aaKnown RBP29.88■■■□□ 2.37
NME3-202ENST00000561637 COPB2P35606 906 aa29.88■■■□□ 2.37
NME3-202ENST00000561637 FGD4Q96M96 766 aa29.88■■■□□ 2.37
NME3-202ENST00000561637 TINF2Q9BSI4 451 aa29.88■■■□□ 2.37
NME3-202ENST00000561637 DIAPH3Q9NSV4 1193 aa29.88■■■□□ 2.37
NME3-202ENST00000561637 CTDP1Q9Y5B0 961 aaPredicted RBP29.88■■■□□ 2.37
NME3-202ENST00000561637 NEDD4P46934 1319 aa29.88■■■□□ 2.37
NME3-202ENST00000561637 IKQ13123 557 aaPredicted RBP29.87■■■□□ 2.37
NME3-202ENST00000561637 USP38Q8NB14 1042 aa29.87■■■□□ 2.37
NME3-202ENST00000561637 STAG1Q8WVM7 1258 aa29.87■■■□□ 2.37
NME3-202ENST00000561637 RNPC3Q96LT9 517 aaKnown RBP29.87■■■□□ 2.37
NME3-202ENST00000561637 AGBL1Q96MI9 1066 aa29.87■■■□□ 2.37
NME3-202ENST00000561637 PHF24Q9UPV7 400 aa29.87■■■□□ 2.37
NME3-202ENST00000561637 ZNF536O15090 1300 aa29.87■■■□□ 2.37
NME3-202ENST00000561637 DNAJC25-GNG10A0A024R161 153 aa29.86■■■□□ 2.37
NME3-202ENST00000561637 STAT2P52630 851 aa29.86■■■□□ 2.37
NME3-202ENST00000561637 TTBK2Q6IQ55 1244 aa29.86■■■□□ 2.37
NME3-202ENST00000561637 TMEM47Q9BQJ4 181 aa29.86■■■□□ 2.37
NME3-202ENST00000561637 CLTBP09497 229 aa29.85■■■□□ 2.37
NME3-202ENST00000561637 GRIN2CQ14957 1233 aa29.85■■■□□ 2.37
NME3-202ENST00000561637 AKNAD1Q5T1N1 836 aa29.85■■■□□ 2.37
NME3-202ENST00000561637 RCSD1Q6JBY9 416 aa29.85■■■□□ 2.37
NME3-202ENST00000561637 CCDC174Q6PII3 467 aa29.85■■■□□ 2.37
NME3-202ENST00000561637 DIS3Q9Y2L1 958 aaKnown RBP29.85■■■□□ 2.37
NME3-202ENST00000561637 ZNF865P0CJ78 1059 aaPredicted RBP29.84■■■□□ 2.37
NME3-202ENST00000561637 CCDC96Q2M329 555 aa29.84■■■□□ 2.37
NME3-202ENST00000561637 FAM160B2Q86V87 743 aa29.84■■■□□ 2.37
NME3-202ENST00000561637 DDX11Q96FC9 970 aa29.84■■■□□ 2.37
NME3-202ENST00000561637 XPNPEP3Q9NQH7 507 aa29.84■■■□□ 2.37
NME3-202ENST00000561637 PRR12Q9ULL5 1215 aa29.84■■■□□ 2.37
NME3-202ENST00000561637 MCM3APO60318 1980 aa29.83■■■□□ 2.37
NME3-202ENST00000561637 FRMPD2Q68DX3 1309 aaPredicted RBP29.83■■■□□ 2.37
NME3-202ENST00000561637 TMEM265A0A087WTH1 108 aa29.83■■■□□ 2.37
NME3-202ENST00000561637 SNAI1O95863 264 aaPredicted RBP29.83■■■□□ 2.37
NME3-202ENST00000561637 PGK1P00558 417 aa29.83■■■□□ 2.37
NME3-202ENST00000561637 SLC16A2P36021 539 aa29.83■■■□□ 2.37
NME3-202ENST00000561637 CHURC1Q8WUH1 139 aa29.83■■■□□ 2.37
NME3-202ENST00000561637 SYMPKQ92797 1274 aaKnown RBP29.83■■■□□ 2.37
NME3-202ENST00000561637 LAMA4Q16363 1823 aa29.82■■■□□ 2.36
NME3-202ENST00000561637 KIAA0355O15063 1070 aa29.82■■■□□ 2.36
NME3-202ENST00000561637 OAZ1P54368 228 aa29.82■■■□□ 2.36
NME3-202ENST00000561637 TTC22Q5TAA0 569 aa29.82■■■□□ 2.36
NME3-202ENST00000561637 MFSD6Q6ZSS7 791 aa29.82■■■□□ 2.36
NME3-202ENST00000561637 ZKSCAN3Q9BRR0 538 aa29.82■■■□□ 2.36
NME3-202ENST00000561637 DDX49Q9Y6V7 483 aaKnown RBP29.82■■■□□ 2.36
NME3-202ENST00000561637 PQBP1O60828 265 aaKnown RBP29.81■■■□□ 2.36
NME3-202ENST00000561637 TOP1P11387 765 aaKnown RBP29.81■■■□□ 2.36
NME3-202ENST00000561637 RAG1P15918 1043 aa29.81■■■□□ 2.36
NME3-202ENST00000561637 CNTN2Q02246 1040 aa29.81■■■□□ 2.36
NME3-202ENST00000561637 PPP4R3BQ5MIZ7 849 aa29.81■■■□□ 2.36
NME3-202ENST00000561637 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.81■■■□□ 2.36
NME3-202ENST00000561637 ANKRD35Q8N283 1001 aa29.81■■■□□ 2.36
NME3-202ENST00000561637 GPCPD1Q9NPB8 672 aa29.81■■■□□ 2.36
NME3-202ENST00000561637 RNF146Q9NTX7 359 aa29.81■■■□□ 2.36
NME3-202ENST00000561637 TCP11L1Q9NUJ3 509 aa29.81■■■□□ 2.36
NME3-202ENST00000561637 MYO9BQ13459 2157 aa29.8■■■□□ 2.36
NME3-202ENST00000561637 A0A1W2PQ45 241 aaPredicted RBP29.8■■■□□ 2.36
NME3-202ENST00000561637 A0A1W2PQY0 241 aa29.8■■■□□ 2.36
NME3-202ENST00000561637 RARBP10826 455 aa29.8■■■□□ 2.36
NME3-202ENST00000561637 MFAP1P55081 439 aaKnown RBP29.8■■■□□ 2.36
NME3-202ENST00000561637 CHST13Q8NET6 341 aa29.8■■■□□ 2.36
NME3-202ENST00000561637 DCAF4Q8WV16 495 aa29.8■■■□□ 2.36
NME3-202ENST00000561637 PLA2G6O60733 806 aa29.79■■■□□ 2.36
NME3-202ENST00000561637 ALAS1P13196 640 aa29.79■■■□□ 2.36
NME3-202ENST00000561637 DNAJB2P25686 324 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms