RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 ZNF790Q6PG37 636 aa11.21□□□□□ -0.61
GTF3C1-202ENST00000561623 ITSN2Q9NZM3 1697 aa11.21□□□□□ -0.61
GTF3C1-202ENST00000561623 CCDC151A5D8V7 595 aa11.21□□□□□ -0.61
GTF3C1-202ENST00000561623 APBA1Q02410 837 aa11.21□□□□□ -0.61
GTF3C1-202ENST00000561623 SULF1Q8IWU6 871 aa11.21□□□□□ -0.61
GTF3C1-202ENST00000561623 PALM2Q8IXS6 379 aa11.21□□□□□ -0.61
GTF3C1-202ENST00000561623 PROCA1Q8NCQ7 364 aaPredicted RBP11.21□□□□□ -0.61
GTF3C1-202ENST00000561623 SSH3Q8TE77 659 aa11.21□□□□□ -0.61
GTF3C1-202ENST00000561623 CD2APQ9Y5K6 639 aa11.21□□□□□ -0.61
GTF3C1-202ENST00000561623 PLCG2P16885 1265 aa11.21□□□□□ -0.62
GTF3C1-202ENST00000561623 MCTP2Q6DN12 878 aa11.21□□□□□ -0.62
GTF3C1-202ENST00000561623 IQCDQ96DY2 449 aa11.21□□□□□ -0.62
GTF3C1-202ENST00000561623 STAT1P42224 750 aa11.21□□□□□ -0.62
GTF3C1-202ENST00000561623 LGSNQ5TDP6 509 aa11.21□□□□□ -0.62
GTF3C1-202ENST00000561623 BSPRYQ5W0U4 402 aa11.21□□□□□ -0.62
GTF3C1-202ENST00000561623 SPATA5Q8NB90 893 aa11.21□□□□□ -0.62
GTF3C1-202ENST00000561623 SUN1O94901 812 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 CYP2J2P51589 502 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 TPTE2Q6XPS3 522 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 A0A1W2PQ27 194 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 A0A1W2PQ64 194 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 A0A1W2PQD8 194 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 SMTNP53814 917 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 P3H4Q92791 437 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 TRPC5Q9UL62 973 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 FAF1Q9UNN5 650 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 MOCS3O95396 460 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 SERPINB6P35237 376 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 CUL4AQ13619 759 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 MYOCDQ8IZQ8 938 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 SAMSN1Q9NSI8 373 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 RAPGEF6Q8TEU7 1601 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 XRCC5P13010 732 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 FBXO18Q8NFZ0 1043 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 DCAF5Q96JK2 942 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 CSADQ9Y600 493 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 ZBTB22O15209 634 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 CNOT6LQ96LI5 555 aaKnown RBP11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 BIVM-ERCC5R4GMW8 1640 aa11.2□□□□□ -0.62
GTF3C1-202ENST00000561623 POLE2P56282 527 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 USH1GQ495M9 461 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.19□□□□□ -0.621e-6■■■■□ 24.9
GTF3C1-202ENST00000561623 PPP1R9AQ9ULJ8 1098 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 ATP8A1Q9Y2Q0 1164 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 MAGEA9P43362 315 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 PPARAQ07869 468 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 TAF11Q15544 211 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 KMT5BQ4FZB7 885 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 GPBP1Q86WP2 473 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 LRRC8CQ8TDW0 803 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 SLC24A3Q9HC58 644 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 ADAM21Q9UKJ8 722 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 GUCY2CP25092 1073 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 ICE2Q659A1 982 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 TTC30AQ86WT1 665 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 CCDC24Q8N4L8 307 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 MAN1B1Q9UKM7 699 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 IKBKBO14920 756 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 CTNND1O60716 968 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 GNA14O95837 355 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 ATP1A3P13637 1013 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 TRPC3Q13507 836 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 VSTM4Q8IW00 320 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 CARMIL3Q8ND23 1372 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 TRMT2AQ8IZ69 625 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 GPKOWQ92917 476 aaPredicted RBP eCLIP11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 EPC1Q9H2F5 836 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 ASXL2Q76L83 1435 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 CFAP43Q8NDM7 1665 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 SMCO2A6NFE2 343 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 EIF3CLB5ME19 914 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 SLCO1A2P46721 670 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 HIBCHQ6NVY1 386 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 MAIP1Q8WWC4 291 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 EIF3CQ99613 913 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 TUBGCP2Q9BSJ2 902 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 TSPYL2Q9H2G4 693 aaPredicted RBP11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 ZCCHC17Q9NP64 241 aaKnown RBP11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 TRAPPC8Q9Y2L5 1435 aa11.19□□□□□ -0.62
GTF3C1-202ENST00000561623 POC1B-GALNT4F8VUJ3 575 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 SH3BP5O60239 455 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 FTCDO95954 541 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 NXNQ6DKJ4 435 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 KLHL29Q96CT2 875 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 RBM17Q96I25 401 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 DAPK3O43293 454 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 PTGDRQ13258 359 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 RCN2Q14257 317 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 SLC39A14Q15043 492 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 NSUN7Q8NE18 718 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 RSAD2Q8WXG1 361 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 ABTB1Q969K4 478 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 TRIM6Q9C030 488 aaPredicted RBP11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 NYXQ9GZU5 481 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 TLR7Q9NYK1 1049 aaKnown RBP11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 USP27XA6NNY8 438 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 BLIDQ8IZY5 108 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 MAP4K1Q92918 833 aa11.18□□□□□ -0.62
GTF3C1-202ENST00000561623 CFAP65Q6ZU64 1925 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms