RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 SRRDQ9UH36 339 aa11.24□□□□□ -0.61
LINC00566-201ENST00000561557 PTPN22Q9Y2R2 807 aa11.24□□□□□ -0.61
LINC00566-201ENST00000561557 WDR19Q8NEZ3 1342 aa11.24□□□□□ -0.61
LINC00566-201ENST00000561557 RLFQ13129 1914 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 TMEM232C9JQI7 657 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 VWA5AO00534 786 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 TNPO2O14787 897 aaKnown RBP11.23□□□□□ -0.61
LINC00566-201ENST00000561557 IFIT3O14879 490 aaKnown RBP11.23□□□□□ -0.61
LINC00566-201ENST00000561557 ATP2A1O14983 1001 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 SNHG28P0DPA3 235 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 PDHBP11177 359 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 OAZ1P54368 228 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 WTAPQ15007 396 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 TNS4Q8IZW8 715 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 NKX2-3Q8TAU0 364 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 IGDCC4Q8TDY8 1250 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 ATG4CQ96DT6 458 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 NEK1Q96PY6 1258 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 NUP88Q99567 741 aaPredicted RBP11.23□□□□□ -0.61
LINC00566-201ENST00000561557 USP26Q9BXU7 913 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 ARHGAP39Q9C0H5 1083 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 SPATC1LQ9H0A9 340 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 FBXO28Q9NVF7 368 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 BTBD7Q9P203 1132 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 PNMA2Q9UL42 364 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 CTDP1Q9Y5B0 961 aaPredicted RBP11.23□□□□□ -0.61
LINC00566-201ENST00000561557 TAF6LQ9Y6J9 622 aa11.23□□□□□ -0.61
LINC00566-201ENST00000561557 MGAMO43451 1857 aa11.22□□□□□ -0.61
LINC00566-201ENST00000561557 STRNO43815 780 aa11.22□□□□□ -0.61
LINC00566-201ENST00000561557 CTGFP29279 349 aa11.22□□□□□ -0.61
LINC00566-201ENST00000561557 STAT3P40763 770 aa11.22□□□□□ -0.61
LINC00566-201ENST00000561557 LIFRP42702 1097 aa11.22□□□□□ -0.61
LINC00566-201ENST00000561557 ZNF543Q08ER8 600 aa11.22□□□□□ -0.61
LINC00566-201ENST00000561557 IRF5Q13568 498 aa11.22□□□□□ -0.61
LINC00566-201ENST00000561557 ASPRV1Q53RT3 343 aa11.22□□□□□ -0.61
LINC00566-201ENST00000561557 DHX32Q7L7V1 743 aaKnown RBP11.22□□□□□ -0.61
LINC00566-201ENST00000561557 PLEKHH3Q7Z736 793 aa11.22□□□□□ -0.61
LINC00566-201ENST00000561557 REPS2Q8NFH8 660 aa11.22□□□□□ -0.61
LINC00566-201ENST00000561557 MAP3K14Q99558 947 aa11.22□□□□□ -0.61
LINC00566-201ENST00000561557 MROH8Q9H579 483 aa11.22□□□□□ -0.61
LINC00566-201ENST00000561557 SLC38A10Q9HBR0 1119 aa11.22□□□□□ -0.61
LINC00566-201ENST00000561557 PARP14Q460N5 1801 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 PRC1O43663 620 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 GTPBP6O43824 516 aaPredicted RBP11.21□□□□□ -0.61
LINC00566-201ENST00000561557 PSMA5P28066 241 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 ANTXR2P58335 489 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 CAP1Q01518 475 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 IKQ13123 557 aaPredicted RBP11.21□□□□□ -0.61
LINC00566-201ENST00000561557 TMEM132BQ14DG7 1078 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 CCDC96Q2M329 555 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 TMEM67Q5HYA8 995 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 KCTD1Q719H9 257 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 GPR142Q7Z601 462 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 RIOX2Q8IUF8 465 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 FBXO22Q8NEZ5 403 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 SOCS4Q8WXH5 440 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 KIFC2Q96AC6 838 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 NUDT12Q9BQG2 462 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 MOV10L1Q9BXT6 1211 aaKnown RBP11.21□□□□□ -0.61
LINC00566-201ENST00000561557 CWC22Q9HCG8 908 aaKnown RBP11.21□□□□□ -0.61
LINC00566-201ENST00000561557 GJD2Q9UKL4 321 aa11.21□□□□□ -0.61
LINC00566-201ENST00000561557 ISY1Q9ULR0 285 aaKnown RBP11.21□□□□□ -0.61
LINC00566-201ENST00000561557 DOCK3Q8IZD9 2030 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 SLC15A5A6NIM6 579 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 PARP1P09874 1014 aaKnown RBP11.2□□□□□ -0.62
LINC00566-201ENST00000561557 CALM1P0DP23 149 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 CALM2P0DP24 149 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 CALM3P0DP25 149 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 XRCC5P13010 732 aaKnown RBP11.2□□□□□ -0.62
LINC00566-201ENST00000561557 PTPREP23469 700 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 EXOSC10Q01780 885 aaKnown RBP11.2□□□□□ -0.62
LINC00566-201ENST00000561557 TKFCQ3LXA3 575 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 SYDE2Q5VT97 1194 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.2□□□□□ -0.62
LINC00566-201ENST00000561557 CATIPQ7Z7H3 387 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 NBPF11Q86T75 865 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 TRMT44Q8IYL2 757 aaKnown RBP11.2□□□□□ -0.62
LINC00566-201ENST00000561557 ABRAQ8N0Z2 381 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 RAET1EQ8TD07 263 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 PXYLP1Q8TE99 480 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 TEX13BQ9BXU2 312 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 PORCNQ9H237 461 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 ZNF214Q9UL59 606 aaPredicted RBP11.2□□□□□ -0.62
LINC00566-201ENST00000561557 PRR12Q9ULL5 1215 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 MTMR7Q9Y216 660 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 SNX14Q9Y5W7 946 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 IVNS1ABPQ9Y6Y0 642 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 A0A0G2JMZ2 1700 aa11.2□□□□□ -0.62
LINC00566-201ENST00000561557 PCNTO95613 3336 aa11.19□□□□□ -0.62
LINC00566-201ENST00000561557 SH2B2O14492 632 aaPredicted RBP11.19□□□□□ -0.62
LINC00566-201ENST00000561557 DDAH1O94760 285 aa11.19□□□□□ -0.62
LINC00566-201ENST00000561557 ERCC3P19447 782 aa11.19□□□□□ -0.62
LINC00566-201ENST00000561557 FLT3LGP49771 235 aa11.19□□□□□ -0.62
LINC00566-201ENST00000561557 ANAPC15P60006 121 aa11.19□□□□□ -0.62
LINC00566-201ENST00000561557 PLCB2Q00722 1185 aa11.19□□□□□ -0.62
LINC00566-201ENST00000561557 PRKCZQ05513 592 aa11.19□□□□□ -0.62
LINC00566-201ENST00000561557 PLS1Q14651 629 aa11.19□□□□□ -0.62
LINC00566-201ENST00000561557 ADCK5Q3MIX3 580 aa11.19□□□□□ -0.62
LINC00566-201ENST00000561557 MORN1Q5T089 497 aa11.19□□□□□ -0.62
LINC00566-201ENST00000561557 BLOC1S2Q6QNY1 142 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms