RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 TTC41PQ6P2S7 1318 aa10.02□□□□□ -0.81
PALB2-202ENST00000561514 BAZ2AQ9UIF9 1905 aaKnown RBP10.01□□□□□ -0.81
PALB2-202ENST00000561514 MYADML2A6NDP7 307 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 PATL2C9JE40 543 aaKnown RBP10.01□□□□□ -0.81
PALB2-202ENST00000561514 FOXP2O15409 715 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 ZBED4O75132 1171 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 FPGSQ05932 587 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 ACVR2BQ13705 512 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 ZMYM1Q5SVZ6 1142 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 IFNL3Q8IZI9 196 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 FAM133AQ8N9E0 248 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 NUP133Q8WUM0 1156 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 GMCL1Q96IK5 515 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 STARD7Q9NQZ5 370 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.01□□□□□ -0.81
PALB2-202ENST00000561514 CLIP2Q9UDT6 1046 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.01□□□□□ -0.81
PALB2-202ENST00000561514 ZNF536O15090 1300 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 SALL3Q9BXA9 1300 aa10.01□□□□□ -0.81
PALB2-202ENST00000561514 DCDC2CA8MYV0 355 aa10□□□□□ -0.81
PALB2-202ENST00000561514 MINDY4BA8MYZ0 360 aa10□□□□□ -0.81
PALB2-202ENST00000561514 PQBP1O60828 265 aaKnown RBP10□□□□□ -0.81
PALB2-202ENST00000561514 PRDM1O75626 825 aa10□□□□□ -0.81
PALB2-202ENST00000561514 TIMP1P01033 207 aa10□□□□□ -0.81
PALB2-202ENST00000561514 BMP3P12645 472 aa10□□□□□ -0.81
PALB2-202ENST00000561514 RAG1P15918 1043 aa10□□□□□ -0.81
PALB2-202ENST00000561514 TDO2P48775 406 aa10□□□□□ -0.81
PALB2-202ENST00000561514 KCNA10Q16322 511 aa10□□□□□ -0.81
PALB2-202ENST00000561514 LRRFIP1Q32MZ4 808 aaKnown RBP10□□□□□ -0.81
PALB2-202ENST00000561514 TKFCQ3LXA3 575 aa10□□□□□ -0.81
PALB2-202ENST00000561514 TSHZ3Q63HK5 1081 aa10□□□□□ -0.81
PALB2-202ENST00000561514 ARMCX2Q7L311 632 aa10□□□□□ -0.81
PALB2-202ENST00000561514 SLC43A3Q8NBI5 491 aa10□□□□□ -0.81
PALB2-202ENST00000561514 PCSK9Q8NBP7 692 aaKnown RBP10□□□□□ -0.81
PALB2-202ENST00000561514 MAFAQ8NHW3 353 aaPredicted RBP10□□□□□ -0.81
PALB2-202ENST00000561514 DDX11Q96FC9 970 aa10□□□□□ -0.81
PALB2-202ENST00000561514 RNPC3Q96LT9 517 aaKnown RBP10□□□□□ -0.81
PALB2-202ENST00000561514 FAM161BQ96MY7 647 aa10□□□□□ -0.81
PALB2-202ENST00000561514 RAVER2Q9HCJ3 691 aaKnown RBP10□□□□□ -0.81
PALB2-202ENST00000561514 TMEM39AQ9NV64 488 aa10□□□□□ -0.81
PALB2-202ENST00000561514 ZHX1Q9UKY1 873 aaPredicted RBP10□□□□□ -0.81
PALB2-202ENST00000561514 MROH7Q68CQ1 1323 aa10□□□□□ -0.81
PALB2-202ENST00000561514 A0A0U1RQG5 324 aaPredicted RBP9.99□□□□□ -0.81
PALB2-202ENST00000561514 FGRP09769 529 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 CCDC144BQ3MJ40 725 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 PPP4R3BQ5MIZ7 849 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 SLFN13Q68D06 897 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 MFSD5Q6N075 450 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 FAM160B2Q86V87 743 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 FAM126BQ8IXS8 530 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 ZNF444Q8N0Y2 327 aaPredicted RBP9.99□□□□□ -0.81
PALB2-202ENST00000561514 LRRC47Q8N1G4 583 aaKnown RBP9.99□□□□□ -0.81
PALB2-202ENST00000561514 MORC4Q8TE76 937 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 STAG1Q8WVM7 1258 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 KIFC2Q96AC6 838 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 GLT1D1Q96MS3 346 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 NACAP1Q9BZK3 213 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 ACAD9Q9H845 621 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 A1CFQ9NQ94 594 aaKnown RBP9.99□□□□□ -0.81
PALB2-202ENST00000561514 ANAPC4Q9UJX5 808 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 GNEQ9Y223 722 aaKnown RBP9.99□□□□□ -0.81
PALB2-202ENST00000561514 ASTN1O14525 1302 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 MYH7P12883 1935 aa9.99□□□□□ -0.81
PALB2-202ENST00000561514 COL11A1P12107 1806 aaPredicted RBP9.98□□□□□ -0.81
PALB2-202ENST00000561514 CHD9Q3L8U1 2897 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 MYH8P13535 1937 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 MUC3AQ02505 3323 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 ARVCFO00192 962 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 ERC2O15083 957 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 RAD21O60216 631 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 CD4P01730 458 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 ASGR1P07306 291 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 STAT2P52630 851 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 IRX5P78411 483 aaPredicted RBP9.98□□□□□ -0.81
PALB2-202ENST00000561514 PDE4BQ07343 736 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 PPARAQ07869 468 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 C16orf59Q7L2K0 433 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 TICAM2Q86XR7 235 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 CCDC144CPQ8IYA2 1237 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 CPXCR1Q8N123 301 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 ANKRD35Q8N283 1001 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 CHURC1Q8WUH1 139 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 MYLIPQ8WY64 445 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 SEC62Q99442 399 aaKnown RBP9.98□□□□□ -0.81
PALB2-202ENST00000561514 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.98□□□□□ -0.81
PALB2-202ENST00000561514 SEZ6LQ9BYH1 1024 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 EYSQ5T1H1 3165 aa9.98□□□□□ -0.81
PALB2-202ENST00000561514 PRUNE2Q8WUY3 3088 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 LOC102724159A0A0B4J2E5 919 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.97□□□□□ -0.81
PALB2-202ENST00000561514 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.97□□□□□ -0.81
PALB2-202ENST00000561514 SOWAHBA6NEL2 793 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 ASB14A6NK59 587 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 TMEM232C9JQI7 657 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 ORC4O43929 436 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 CABYRO75952 493 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 SLC3A2P08195 630 aaKnown RBP9.97□□□□□ -0.81
PALB2-202ENST00000561514 C6orf222P0C671 652 aaPredicted RBP9.97□□□□□ -0.81
PALB2-202ENST00000561514 TSPY3P0CV98 308 aa9.97□□□□□ -0.81
PALB2-202ENST00000561514 TSPY8P0CW00 308 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms