RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	PDHB	P11177	359 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	BMP3	P12645	472 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	SMARCA1	P28370	1054 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	SLC1A4	P43007	532 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	MAP2K1	Q02750	393 aa	Predicted RBP	11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	TROAP	Q12815	778 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	MOGS	Q13724	837 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	APOA5	Q6Q788	366 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	GADL1	Q6ZQY3	521 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CHST3	Q7LGC8	479 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CCDC84	Q86UT8	332 aa	Predicted RBP	11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	FAM160B2	Q86V87	743 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CLEC10A	Q8IUN9	316 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	ZNF654	Q8IZM8	581 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	LRRC47	Q8N1G4	583 aa	Known RBP	11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CTCFL	Q8NI51	663 aa	Predicted RBP	11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	NKX2-3	Q8TAU0	364 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CHURC1	Q8WUH1	139 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	BRI3BP	Q8WY22	251 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	ZNF274	Q96GC6	653 aa	Predicted RBP	11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	LZTS2	Q9BRK4	669 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CFHR5	Q9BXR6	569 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	UPF3B	Q9BZI7	483 aa	Known RBP	11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	RBM28	Q9NW13	759 aa	Known RBP	11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	HOXC10	Q9NYD6	342 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	FEM1B	Q9UK73	627 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	PNMA2	Q9UL42	364 aa		11.55	□□□□□ -0.56
KNSTRN-215	ENST00000561367	NID2	Q14112	1375 aa		11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	ZBTB43	O43298	467 aa		11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CA12	O43570	354 aa		11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	DHX16	O60231	1041 aa	Known RBP	11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	PARP1	P09874	1014 aa	Known RBP	11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	STAT2	P52630	851 aa		11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	IRX3	P78415	501 aa	Predicted RBP	11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	ZNF543	Q08ER8	600 aa		11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	COG2	Q14746	738 aa		11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	ZYX	Q15942	572 aa	Known RBP	11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	BTNL9	Q6UXG8	535 aa		11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	LBX2	Q6XYB7	198 aa		11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	CATSPERG	Q6ZRH7	1159 aa		11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	PACS2	Q86VP3	889 aa		11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	MB21D1	Q8N884	522 aa		11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	PRPF38A	Q8NAV1	312 aa	Known RBP	11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	BRF1	Q92994	677 aa		11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	PARK7	Q99497	189 aa	Known RBP	11.54	□□□□□ -0.56
KNSTRN-215	ENST00000561367	MYH4	Q9Y623	1939 aa		11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	KLF18	A0A0U1RQI7	1052 aa		11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	BTBD19	C9JJ37	291 aa		11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	PDHX	O00330	501 aa		11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	RAD21	O60216	631 aa		11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	GCLC	P48506	637 aa	Predicted RBP	11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	TRAF1	Q13077	416 aa		11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	GRM1	Q13255	1194 aa		11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	TOB2	Q14106	344 aa	Predicted RBP	11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	GRM4	Q14833	912 aa		11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	GPAT2	Q6NUI2	795 aa		11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	TTC13	Q8NBP0	860 aa		11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	TANGO6	Q9C0B7	1094 aa		11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	SAGE1	Q9NXZ1	904 aa		11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	LIMCH1	Q9UPQ0	1083 aa		11.53	□□□□□ -0.56
KNSTRN-215	ENST00000561367	PTPRF	P10586	1907 aa		11.52	□□□□□ -0.56
KNSTRN-215	ENST00000561367	PALM3	A6NDB9	673 aa	Predicted RBP	11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	CPA1	P15085	419 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	AK2	P54819	239 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	CCDC96	Q2M329	555 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	NOM1	Q5C9Z4	860 aa	Known RBP	11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	FAM83B	Q5T0W9	1011 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	CPLX2	Q6PUV4	134 aa	Known RBP	11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	PADI6	Q6TGC4	694 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	SPICE1	Q8N0Z3	855 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	DNAJC5G	Q8N7S2	189 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	FANCB	Q8NB91	859 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	TCEANC2	Q96MN5	208 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	PTPN18	Q99952	460 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	SLF1	Q9BQI6	1058 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	BEGAIN	Q9BUH8	593 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	LRRC2	Q9BYS8	371 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	ZFYVE28	Q9HCC9	887 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	WBP1L	Q9NX94	342 aa		11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	RBM27	Q9P2N5	1060 aa	Known RBP	11.52	□□□□□ -0.57
KNSTRN-215	ENST00000561367	GOLGA8B	A8MQT2	603 aa		11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	TMEM232	C9JQI7	657 aa		11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	AOC2	O75106	756 aa		11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	FLOT1	O75955	427 aa		11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	PDIA3	P30101	505 aa	Known RBP	11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	METAP2	P50579	478 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	OAZ1	P54368	228 aa		11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	HTRA3	P83110	453 aa		11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	APOBR	Q0VD83	1088 aa		11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	COL9A3	Q14050	684 aa	Predicted RBP	11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	KIAA1755	Q5JYT7	1200 aa		11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	TREML2	Q5T2D2	321 aa		11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	MICU3	Q86XE3	530 aa		11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	FAM43A	Q8N2R8	423 aa		11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	SMCR8	Q8TEV9	937 aa	Predicted RBP	11.51	□□□□□ -0.57
KNSTRN-215	ENST00000561367	NUP133	Q8WUM0	1156 aa		11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms