RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ZNF536O15090 1300 aa19.19■□□□□ 0.66
SNX1-213ENST00000561026 ADAMTS4O75173 837 aa19.19■□□□□ 0.66
SNX1-213ENST00000561026 HSPD1P10809 573 aaKnown RBP19.19■□□□□ 0.66
SNX1-213ENST00000561026 ACVR2BQ13705 512 aa19.19■□□□□ 0.66
SNX1-213ENST00000561026 KCTD1Q719H9 257 aa19.19■□□□□ 0.66
SNX1-213ENST00000561026 AGBL1Q96MI9 1066 aa19.19■□□□□ 0.66
SNX1-213ENST00000561026 TSEN34Q9BSV6 310 aaKnown RBP19.19■□□□□ 0.66
SNX1-213ENST00000561026 ACAD9Q9H845 621 aa19.19■□□□□ 0.66
SNX1-213ENST00000561026 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.19■□□□□ 0.66
SNX1-213ENST00000561026 ZHX1Q9UKY1 873 aaPredicted RBP19.19■□□□□ 0.66
SNX1-213ENST00000561026 TRIM6-TRIM34B2RNG4 842 aa19.18■□□□□ 0.66
SNX1-213ENST00000561026 TLE2Q04725 743 aa19.18■□□□□ 0.66
SNX1-213ENST00000561026 NMIQ13287 307 aaPredicted RBP19.18■□□□□ 0.66
SNX1-213ENST00000561026 B4GALNT3Q6L9W6 998 aa19.18■□□□□ 0.66
SNX1-213ENST00000561026 ZNF589Q86UQ0 364 aaPredicted RBP19.18■□□□□ 0.66
SNX1-213ENST00000561026 DEFB123Q8N688 67 aa19.18■□□□□ 0.66
SNX1-213ENST00000561026 ABHD16BQ9H3Z7 469 aa19.18■□□□□ 0.66
SNX1-213ENST00000561026 PRDM5Q9NQX1 630 aaPredicted RBP19.18■□□□□ 0.66
SNX1-213ENST00000561026 PDLIM7Q9NR12 457 aa19.18■□□□□ 0.66
SNX1-213ENST00000561026 A0A1W2PQ45 241 aaPredicted RBP19.17■□□□□ 0.66
SNX1-213ENST00000561026 A0A1W2PQY0 241 aa19.17■□□□□ 0.66
SNX1-213ENST00000561026 DUSP11O75319 330 aaKnown RBP19.17■□□□□ 0.66
SNX1-213ENST00000561026 CNTN2Q02246 1040 aa19.17■□□□□ 0.66
SNX1-213ENST00000561026 TKFCQ3LXA3 575 aa19.17■□□□□ 0.66
SNX1-213ENST00000561026 SH3RF1Q7Z6J0 888 aa19.17■□□□□ 0.66
SNX1-213ENST00000561026 CHD1LQ86WJ1 897 aa19.17■□□□□ 0.66
SNX1-213ENST00000561026 KLHDC9Q8NEP7 349 aa19.17■□□□□ 0.66
SNX1-213ENST00000561026 RILPL2Q969X0 211 aa19.17■□□□□ 0.66
SNX1-213ENST00000561026 TOMM22Q9NS69 142 aa19.17■□□□□ 0.66
SNX1-213ENST00000561026 RNF146Q9NTX7 359 aa19.17■□□□□ 0.66
SNX1-213ENST00000561026 PRR12Q9ULL5 1215 aa19.17■□□□□ 0.66
SNX1-213ENST00000561026 SYNRGQ9UMZ2 1314 aa19.17■□□□□ 0.66
SNX1-213ENST00000561026 TRIM43BA6NCK2 446 aa19.16■□□□□ 0.66
SNX1-213ENST00000561026 POTEB2H3BUK9 544 aa19.16■□□□□ 0.66
SNX1-213ENST00000561026 IGHDP01880 384 aa19.16■□□□□ 0.66
SNX1-213ENST00000561026 ACLYP53396 1101 aa19.16■□□□□ 0.66
SNX1-213ENST00000561026 CCSAPQ6IQ19 270 aaPredicted RBP19.16■□□□□ 0.66
SNX1-213ENST00000561026 ARMCX2Q7L311 632 aa19.16■□□□□ 0.66
SNX1-213ENST00000561026 RASGRP2Q7LDG7 609 aa19.16■□□□□ 0.66
SNX1-213ENST00000561026 CCDC144CPQ8IYA2 1237 aa19.16■□□□□ 0.66
SNX1-213ENST00000561026 FAM133AQ8N9E0 248 aa19.16■□□□□ 0.66
SNX1-213ENST00000561026 TRIM43Q96BQ3 446 aaPredicted RBP19.16■□□□□ 0.66
SNX1-213ENST00000561026 TRERF1Q96PN7 1200 aa19.16■□□□□ 0.66
SNX1-213ENST00000561026 A1CFQ9NQ94 594 aaKnown RBP19.16■□□□□ 0.66
SNX1-213ENST00000561026 TCP11L1Q9NUJ3 509 aa19.16■□□□□ 0.66
SNX1-213ENST00000561026 MTMR7Q9Y216 660 aa19.16■□□□□ 0.66
SNX1-213ENST00000561026 ZMYM6O95789 1325 aa19.16■□□□□ 0.66
SNX1-213ENST00000561026 CCDC171Q6TFL3 1326 aa19.15■□□□□ 0.66
SNX1-213ENST00000561026 MOXD2PA6NHM9 499 aa19.15■□□□□ 0.66
SNX1-213ENST00000561026 SNAP25P60880 206 aa19.15■□□□□ 0.66
SNX1-213ENST00000561026 NUCB1Q02818 461 aa19.15■□□□□ 0.66
SNX1-213ENST00000561026 KCNA10Q16322 511 aa19.15■□□□□ 0.66
SNX1-213ENST00000561026 CCDC144BQ3MJ40 725 aa19.15■□□□□ 0.66
SNX1-213ENST00000561026 RRP12Q5JTH9 1297 aaKnown RBP19.15■□□□□ 0.66
SNX1-213ENST00000561026 CCDC174Q6PII3 467 aa19.15■□□□□ 0.66
SNX1-213ENST00000561026 Q7L0L9 218 aa19.15■□□□□ 0.66
SNX1-213ENST00000561026 PLEKHM2Q8IWE5 1019 aa19.15■□□□□ 0.66
SNX1-213ENST00000561026 NUP133Q8WUM0 1156 aa19.15■□□□□ 0.66
SNX1-213ENST00000561026 DCAF4Q8WV16 495 aa19.15■□□□□ 0.66
SNX1-213ENST00000561026 BADQ92934 168 aa19.15■□□□□ 0.66
SNX1-213ENST00000561026 OSBPL3Q9H4L5 887 aa19.15■□□□□ 0.66
SNX1-213ENST00000561026 ADCY6O43306 1168 aa19.14■□□□□ 0.65
SNX1-213ENST00000561026 TOP1P11387 765 aaKnown RBP19.14■□□□□ 0.65
SNX1-213ENST00000561026 ALAS1P13196 640 aa19.14■□□□□ 0.65
SNX1-213ENST00000561026 SDSP20132 328 aa19.14■□□□□ 0.65
SNX1-213ENST00000561026 HAND2P61296 217 aa19.14■□□□□ 0.65
SNX1-213ENST00000561026 TMEM47Q9BQJ4 181 aa19.14■□□□□ 0.65
SNX1-213ENST00000561026 KATNBL1Q9H079 304 aa19.14■□□□□ 0.65
SNX1-213ENST00000561026 MYADML2A6NDP7 307 aa19.13■□□□□ 0.65
SNX1-213ENST00000561026 SOWAHBA6NEL2 793 aa19.13■□□□□ 0.65
SNX1-213ENST00000561026 PQBP1O60828 265 aaKnown RBP19.13■□□□□ 0.65
SNX1-213ENST00000561026 CLTBP09497 229 aa19.13■□□□□ 0.65
SNX1-213ENST00000561026 PCP11498 1178 aaKnown RBP19.13■□□□□ 0.65
SNX1-213ENST00000561026 CST5P28325 142 aaPredicted RBP19.13■□□□□ 0.65
SNX1-213ENST00000561026 SHHQ15465 462 aa19.13■□□□□ 0.65
SNX1-213ENST00000561026 CCDC96Q2M329 555 aa19.13■□□□□ 0.65
SNX1-213ENST00000561026 AKNAD1Q5T1N1 836 aa19.13■□□□□ 0.65
SNX1-213ENST00000561026 TTBK2Q6IQ55 1244 aa19.13■□□□□ 0.65
SNX1-213ENST00000561026 ANKRD33Q7Z3H0 272 aa19.13■□□□□ 0.65
SNX1-213ENST00000561026 EXOC6Q8TAG9 804 aa19.13■□□□□ 0.65
SNX1-213ENST00000561026 STARD7Q9NQZ5 370 aa19.13■□□□□ 0.65
SNX1-213ENST00000561026 MTMR10Q9NXD2 777 aa19.13■□□□□ 0.65
SNX1-213ENST00000561026 LTBP2Q14767 1821 aa19.12■□□□□ 0.65
SNX1-213ENST00000561026 ASB14A6NK59 587 aa19.12■□□□□ 0.65
SNX1-213ENST00000561026 ICAM1P05362 532 aa19.12■□□□□ 0.65
SNX1-213ENST00000561026 C6orf222P0C671 652 aaPredicted RBP19.12■□□□□ 0.65
SNX1-213ENST00000561026 ITGB8P26012 769 aa19.12■□□□□ 0.65
SNX1-213ENST00000561026 SLC16A2P36021 539 aa19.12■□□□□ 0.65
SNX1-213ENST00000561026 MFAP1P55081 439 aaKnown RBP19.12■□□□□ 0.65
SNX1-213ENST00000561026 GJA9P57773 515 aa19.12■□□□□ 0.65
SNX1-213ENST00000561026 MUM1L1Q5H9M0 696 aa19.12■□□□□ 0.65
SNX1-213ENST00000561026 BTNL9Q6UXG8 535 aa19.12■□□□□ 0.65
SNX1-213ENST00000561026 MFSD6Q6ZSS7 791 aa19.12■□□□□ 0.65
SNX1-213ENST00000561026 PCSK9Q8NBP7 692 aaKnown RBP19.12■□□□□ 0.65
SNX1-213ENST00000561026 TTC14Q96N46 770 aa19.12■□□□□ 0.65
SNX1-213ENST00000561026 TOX2Q96NM4 488 aa19.12■□□□□ 0.65
SNX1-213ENST00000561026 UPF3AQ9H1J1 476 aaKnown RBP19.12■□□□□ 0.65
SNX1-213ENST00000561026 SPC25Q9HBM1 224 aa19.12■□□□□ 0.65
SNX1-213ENST00000561026 CYP39A1Q9NYL5 469 aa19.12■□□□□ 0.65
SNX1-213ENST00000561026 CCPG1Q9ULG6 757 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms