RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 CABP5Q9NP86 173 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 FANCLQ9NW38 375 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 DACH1Q9UI36 760 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 CEP131Q9UPN4 1083 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 ADGRG1Q9Y653 693 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 CNTNAP5Q8WYK1 1306 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 SYF2O95926 243 aaKnown RBP15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 DDR1Q08345 913 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 GRIK5Q16478 980 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 C12orf60Q5U649 245 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 SPATS2Q86XZ4 545 aaKnown RBP15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 SRBD1Q8N5C6 995 aaKnown RBP15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 SH3RF3Q8TEJ3 882 aaPredicted RBP15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 KAT2BQ92831 832 aa15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 TTF2Q9UNY4 1162 aaKnown RBP15.67■□□□□ 0.1
RABGGTA-220ENST00000560998 NAV1Q8NEY1 1877 aa15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 AKR1B15C9JRZ8 316 aaPredicted RBP15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 SPECC1Q5M775 1068 aa15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 PRPF38AQ8NAV1 312 aaKnown RBP15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 CCDC148Q8NFR7 591 aa15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 NAPGQ99747 312 aaPredicted RBP15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 SUGCTQ9HAC7 445 aa15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 SRPRBQ9Y5M8 271 aaKnown RBP15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 FAM169AQ9Y6X4 670 aa15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 FAM205CA6NFA0 338 aa15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 TSPY2A6NKD2 308 aa15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 SERPINB2P05120 415 aa15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 ZNF18P17022 549 aa15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 NT5C2P49902 561 aa15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 PPP4CP60510 307 aa15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 RCSD1Q6JBY9 416 aa15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 HOOK1Q9UJC3 728 aaKnown RBP15.66■□□□□ 0.1
RABGGTA-220ENST00000560998 ROBO3Q96MS0 1386 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 SHTN1A0MZ66 631 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 TRIM75PA6NK02 468 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 PHACTR2O75167 634 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 RHOXF2BP0C7M4 288 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 MDM2Q00987 491 aaPredicted RBP15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 DIXDC1Q155Q3 683 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 NPY5RQ15761 445 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 EARS2Q5JPH6 523 aaKnown RBP15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 ISM2Q6H9L7 571 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 KCNV1Q6PIU1 500 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 RASGRP2Q7LDG7 609 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 FOXP4Q8IVH2 680 aaPredicted RBP15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 FAM76AQ8TAV0 307 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 TNFRSF25Q93038 417 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 RHOXF2Q9BQY4 288 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 DESI2Q9BSY9 194 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 HPCAL4Q9UM19 191 aa15.65■□□□□ 0.1
RABGGTA-220ENST00000560998 TARSL2A2RTX5 802 aaKnown RBP15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 ANKRD65E5RJM6 399 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 UFL1O94874 794 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 BAG3O95817 575 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 ATP2B4P23634 1241 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 INPP5BP32019 993 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 ADKP55263 362 aaKnown RBP15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 SLC27A3Q5K4L6 730 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 ZNF569Q5MCW4 686 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 WWC2Q6AWC2 1192 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 CCDC51Q96ER9 411 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 RBM17Q96I25 401 aaKnown RBP15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 CDK5RAP2Q96SN8 1893 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 LDHCP07864 332 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 HSPA1LP34931 641 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 LIG3P49916 1009 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 TFAP4Q01664 338 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 PPFIA1Q13136 1202 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 SLC4A8Q2Y0W8 1093 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 AEBP2Q6ZN18 517 aaPredicted RBP15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 IGSF22Q8N9C0 903 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 ENOX1Q8TC92 643 aaKnown RBP15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 ANKS1AQ92625 1134 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 DYNLL2Q96FJ2 89 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 CABS1Q96KC9 395 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 CD209Q9NNX6 404 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 PCDHA5Q9Y5H7 936 aa15.64■□□□□ 0.09
RABGGTA-220ENST00000560998 FOXN1O15353 648 aa15.63■□□□□ 0.09
RABGGTA-220ENST00000560998 POLR2DO15514 142 aaKnown RBP15.63■□□□□ 0.09
RABGGTA-220ENST00000560998 PRR29P0C7W0 189 aa15.63■□□□□ 0.09
RABGGTA-220ENST00000560998 DGKHQ86XP1 1220 aa15.63■□□□□ 0.09
RABGGTA-220ENST00000560998 MLKLQ8NB16 471 aa15.63■□□□□ 0.09
RABGGTA-220ENST00000560998 COG1Q8WTW3 980 aa15.63■□□□□ 0.09
RABGGTA-220ENST00000560998 RPGRIP1Q96KN7 1286 aa15.63■□□□□ 0.09
RABGGTA-220ENST00000560998 RTFDC1Q9BY42 306 aaPredicted RBP15.63■□□□□ 0.09
RABGGTA-220ENST00000560998 CSRNP2Q9H175 543 aa15.63■□□□□ 0.09
RABGGTA-220ENST00000560998 LZTFL1Q9NQ48 299 aa15.63■□□□□ 0.09
RABGGTA-220ENST00000560998 IL17RBQ9NRM6 502 aa15.63■□□□□ 0.09
RABGGTA-220ENST00000560998 GGA1Q9UJY5 639 aa15.63■□□□□ 0.09
RABGGTA-220ENST00000560998 BAZ2BQ9UIF8 2168 aaKnown RBP15.63■□□□□ 0.09
RABGGTA-220ENST00000560998 TMCO5BA8MYB1 307 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 SCG2P13521 617 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 IL1R1P14778 569 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 FECHP22830 423 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 CALRP27797 417 aaKnown RBP15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 KIF5BP33176 963 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 STIM1Q13586 685 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 AMOTL1Q8IY63 956 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 TGFBRAP1Q8WUH2 860 aa15.62■□□□□ 0.09
RABGGTA-220ENST00000560998 PLEKHA4Q9H4M7 779 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms