RNA–Protein interactions for RNA: ENST00000560744.1

AP001007.3-201, humanhuman

TSL 5 BASIC

Gene AP001007.3, Length 356 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001007.3-201ENST00000560744 NKX2-3Q8TAU0 364 aa7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 U2AF1L4Q8WU68 220 aaKnown RBP7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 SOCS4Q8WXH5 440 aa7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 TRIB2Q92519 343 aa7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 ATG4CQ96DT6 458 aa7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 DEFB118Q96PH6 123 aa7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 MOV10L1Q9BXT6 1211 aaKnown RBP7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 NACAP1Q9BZK3 213 aa7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 NAPBQ9H115 298 aa7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 GZF1Q9H116 711 aaPredicted RBP7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 FBXO28Q9NVF7 368 aa7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 LIMCH1Q9UPQ0 1083 aa7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 DDX49Q9Y6V7 483 aaKnown RBP7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 ROBO3Q96MS0 1386 aa7.06□□□□□ -1.28
AP001007.3-201ENST00000560744 RLFQ13129 1914 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 BRCA2P51587 3418 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 IGKV6D-41A0A0C4DH26 115 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 A0A0D9SFI3 127 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 SLC15A5A6NIM6 579 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 WDR46O15213 610 aaKnown RBP7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 RAD21O60216 631 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 TFRCP02786 760 aaKnown RBP7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 XRCC5P13010 732 aaKnown RBP7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 ZKSCAN1P17029 563 aaPredicted RBP7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 PTPREP23469 700 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 RGS2P41220 211 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 AK2P54819 239 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 PTH1RQ03431 593 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 PPARAQ07869 468 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 MAP2K5Q13163 448 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 FAM47AQ5JRC9 791 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 FAM83BQ5T0W9 1011 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 LRSAM1Q6UWE0 723 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 UBE2Q1Q7Z7E8 422 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 ZNF444Q8N0Y2 327 aaPredicted RBP7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 ZNF687Q8N1G0 1237 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 KHSRPQ92945 711 aaKnown RBP eCLIP7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 ZSCAN31Q96LW9 406 aaPredicted RBP7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 FAM227BQ96M60 508 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 NUP88Q99567 741 aaPredicted RBP7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 UPF3BQ9BZI7 483 aaKnown RBP7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 SPATC1LQ9H0A9 340 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 GOPCQ9HD26 462 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 INCENPQ9NQS7 918 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 PAK6Q9NQU5 681 aaPredicted RBP7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 SH2B1Q9NRF2 756 aaPredicted RBP7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 HELLSQ9NRZ9 838 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 TMEM63CQ9P1W3 806 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 NYAP2Q9P242 653 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 CLIP2Q9UDT6 1046 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 TACC3Q9Y6A5 838 aa7.05□□□□□ -1.28
AP001007.3-201ENST00000560744 RPTORQ8N122 1335 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 GREB1LQ9C091 1923 aaPredicted RBP7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 F5H6K3 240 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 FARP2O94887 1054 aaPredicted RBP7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 NDUFB10O96000 172 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 SLC3A2P08195 630 aaKnown RBP7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 ERCC3P19447 782 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 TFAP4Q01664 338 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 CTDSPL2Q05D32 466 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 PDE4BQ07343 736 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 KLRC3Q07444 240 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 CACNB2Q08289 660 aaPredicted RBP7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 NMIQ13287 307 aaPredicted RBP7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 GRB14Q14449 540 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 PLS1Q14651 629 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 ALX1Q15699 326 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 MCMDC2Q4G0Z9 681 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 MAP3K21Q5TCX8 1036 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 TRMT44Q8IYL2 757 aaKnown RBP7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 MB21D1Q8N884 522 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 SHCBP1Q8NEM2 672 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 NEDD1Q8NHV4 660 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 NPLOC4Q8TAT6 608 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 CEP95Q96GE4 821 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 APBA2Q99767 749 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 ZNF287Q9HBT7 754 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 HMX1Q9NP08 348 aaPredicted RBP7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 MTMR4Q9NYA4 1195 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 FLRT1Q9NZU1 646 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 ADAMTS5Q9UNA0 930 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 LHX6Q9UPM6 363 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 IVNS1ABPQ9Y6Y0 642 aa7.04□□□□□ -1.28
AP001007.3-201ENST00000560744 CEP290O15078 2479 aa7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 ESPNB1AK53 854 aa7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 VWA5AO00534 786 aa7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 COBLO75128 1261 aa7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 PRPF40AO75400 957 aaKnown RBP7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 FGAP02671 866 aa7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 HOXC6P09630 235 aa7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 TSPY3P0CV98 308 aa7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 TSPY8P0CW00 308 aa7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 ZSCAN22P10073 491 aaPredicted RBP7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 CCND3P30281 292 aaPredicted RBP7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 PBX2P40425 430 aa7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 NASPP49321 788 aaPredicted RBP7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 TMEM132BQ14DG7 1078 aa7.03□□□□□ -1.28
AP001007.3-201ENST00000560744 E2F4Q16254 413 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 163.1 ms