RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 ADM5C9JUS6 153 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 F8W031 263 aaPredicted RBP9.64□□□□□ -0.87
CCDC33-209ENST00000560565 M0R2C6 588 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 WNT10BO00744 389 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 CTDNEP1O95476 244 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 LDHCP07864 332 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 KIF23Q02241 960 aaPredicted RBP9.64□□□□□ -0.87
CCDC33-209ENST00000560565 TSR1Q2NL82 804 aaKnown RBP9.64□□□□□ -0.87
CCDC33-209ENST00000560565 TTC31Q49AM3 519 aaPredicted RBP9.64□□□□□ -0.87
CCDC33-209ENST00000560565 RILPL1Q5EBL4 403 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 MFSD14BQ5SR56 506 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 NT5DC1Q5TFE4 455 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 WDR93Q6P2C0 686 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 SLF2Q8IX21 1173 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 CERS5Q8N5B7 392 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 MAGEB6Q8N7X4 407 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 TCEANC2Q96MN5 208 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 SEC62Q99442 399 aaKnown RBP9.64□□□□□ -0.87
CCDC33-209ENST00000560565 FUT8Q9BYC5 575 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 TRIM34Q9BYJ4 488 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 MCOLN1Q9GZU1 580 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 GEMIN8Q9NWZ8 242 aaKnown RBP9.64□□□□□ -0.87
CCDC33-209ENST00000560565 ABCF2Q9UG63 623 aa9.64□□□□□ -0.87
CCDC33-209ENST00000560565 RRP15Q9Y3B9 282 aaKnown RBP9.64□□□□□ -0.87
CCDC33-209ENST00000560565 CACNA1AO00555 2505 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 TARSL2A2RTX5 802 aaKnown RBP9.63□□□□□ -0.87
CCDC33-209ENST00000560565 PATL2C9JE40 543 aaKnown RBP9.63□□□□□ -0.87
CCDC33-209ENST00000560565 ZNF213O14771 459 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 NT5C2P49902 561 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 MNX1P50219 401 aaPredicted RBP9.63□□□□□ -0.87
CCDC33-209ENST00000560565 SOX10P56693 466 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 DLGAP5Q15398 846 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 DNAJC21Q5F1R6 531 aaKnown RBP9.63□□□□□ -0.87
CCDC33-209ENST00000560565 AXDND1Q5T1B0 1012 aaPredicted RBP9.63□□□□□ -0.87
CCDC33-209ENST00000560565 DLK2Q6UY11 383 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 CCDC129Q6ZRS4 1044 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 PAXIP1Q6ZW49 1069 aaPredicted RBP9.63□□□□□ -0.87
CCDC33-209ENST00000560565 POTEDQ86YR6 584 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 TRIM22Q8IYM9 498 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 TMTC2Q8N394 836 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 PDILTQ8N807 584 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 STRBPQ96SI9 672 aaKnown RBP9.63□□□□□ -0.87
CCDC33-209ENST00000560565 NACAP1Q9BZK3 213 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 PUS7LQ9H0K6 701 aaKnown RBP9.63□□□□□ -0.87
CCDC33-209ENST00000560565 KCNH3Q9ULD8 1083 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 TLL2Q9Y6L7 1015 aa9.63□□□□□ -0.87
CCDC33-209ENST00000560565 TCHHQ07283 1943 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 MAGEB6P1A0A0J9YX57 407 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 KLF18A0A0U1RQI7 1052 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 PRC1O43663 620 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 IPO7O95373 1038 aaKnown RBP9.62□□□□□ -0.87
CCDC33-209ENST00000560565 LDHBP07195 334 aaKnown RBP9.62□□□□□ -0.87
CCDC33-209ENST00000560565 CYP7A1P22680 504 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 HOXA7P31268 230 aaPredicted RBP9.62□□□□□ -0.87
CCDC33-209ENST00000560565 PLCD1P51178 756 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 GTF2A1P52655 376 aaPredicted RBP9.62□□□□□ -0.87
CCDC33-209ENST00000560565 RBM5P52756 815 aaKnown RBP eCLIP9.62□□□□□ -0.87
CCDC33-209ENST00000560565 CCT2P78371 535 aaKnown RBP9.62□□□□□ -0.87
CCDC33-209ENST00000560565 SART3Q15020 963 aaKnown RBP9.62□□□□□ -0.87
CCDC33-209ENST00000560565 ICE2Q659A1 982 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 CCDC91Q7Z6B0 441 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 SAPCD2Q86UD0 394 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 C2orf69Q8N8R5 385 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 MTMR14Q8NCE2 650 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 NSUN4Q96CB9 384 aaKnown RBP9.62□□□□□ -0.87
CCDC33-209ENST00000560565 NAPGQ99747 312 aaPredicted RBP9.62□□□□□ -0.87
CCDC33-209ENST00000560565 CNNM2Q9H8M5 875 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 RMND1Q9NWS8 449 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 RSPH14Q9UHP6 348 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 ANGEL1Q9UNK9 670 aaKnown RBP9.62□□□□□ -0.87
CCDC33-209ENST00000560565 CLIC4Q9Y696 253 aa9.62□□□□□ -0.87
CCDC33-209ENST00000560565 DDX60LQ5H9U9 1706 aaKnown RBP9.62□□□□□ -0.87
CCDC33-209ENST00000560565 ATXN2Q99700 1313 aaKnown RBP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 A0A087WUV0 522 aaPredicted RBP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 A0A1B0GTH6 734 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 PPFIA4O75335 1185 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 WDHD1O75717 1129 aaPredicted RBP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 MBD4O95243 580 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 CPP00450 1065 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 PCP11498 1178 aaKnown RBP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 PPP1R2P41236 205 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 ECE1P42892 770 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 AARSP49588 968 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 METAP2P50579 478 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 HUNKP57058 714 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 GRM1Q13255 1194 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 POSTNQ15063 836 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 SPATA1Q5VX52 437 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 CYP26C1Q6V0L0 522 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 MICALCLQ6ZW33 695 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 RASGRP2Q7LDG7 609 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 DZIP1Q86YF9 867 aaKnown RBP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 APOBEC3FQ8IUX4 373 aaKnown RBP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 SUGP1Q8IWZ8 645 aaKnown RBP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 NEK11Q8NG66 645 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 KIFC2Q96AC6 838 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 CDCA5Q96FF9 252 aa9.61□□□□□ -0.87
CCDC33-209ENST00000560565 FAM163AQ96GL9 167 aaPredicted RBP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 ZBED3Q96IU2 234 aaPredicted RBP9.61□□□□□ -0.87
CCDC33-209ENST00000560565 HHIPL1Q96JK4 782 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms