RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 ADD2P35612 726 aa21.37■■□□□ 1.01
TSPAN3-208ENST00000560514 SKIV2LQ15477 1246 aaKnown RBP21.37■■□□□ 1.01
TSPAN3-208ENST00000560514 ARMCX2Q7L311 632 aa21.37■■□□□ 1.01
TSPAN3-208ENST00000560514 OTOP2Q7RTS6 562 aa21.37■■□□□ 1.01
TSPAN3-208ENST00000560514 CXXC1Q9P0U4 656 aaPredicted RBP21.37■■□□□ 1.01
TSPAN3-208ENST00000560514 SMIM22K7EJ46 135 aa21.36■■□□□ 1.01
TSPAN3-208ENST00000560514 CABYRO75952 493 aa21.36■■□□□ 1.01
TSPAN3-208ENST00000560514 PPP2R2DQ66LE6 453 aa21.36■■□□□ 1.01
TSPAN3-208ENST00000560514 KIF1BPQ96EK5 621 aa21.36■■□□□ 1.01
TSPAN3-208ENST00000560514 F5H6K3 240 aa21.35■■□□□ 1.01
TSPAN3-208ENST00000560514 ATP2A1O14983 1001 aa21.35■■□□□ 1.01
TSPAN3-208ENST00000560514 ADCY6O43306 1168 aa21.35■■□□□ 1.01
TSPAN3-208ENST00000560514 CD4P01730 458 aa21.35■■□□□ 1.01
TSPAN3-208ENST00000560514 KLRC3Q07444 240 aa21.35■■□□□ 1.01
TSPAN3-208ENST00000560514 RPUSD2Q8IZ73 545 aaKnown RBP21.35■■□□□ 1.01
TSPAN3-208ENST00000560514 CHST13Q8NET6 341 aa21.35■■□□□ 1.01
TSPAN3-208ENST00000560514 KIFC2Q96AC6 838 aa21.35■■□□□ 1.01
TSPAN3-208ENST00000560514 MKNK2Q9HBH9 465 aa21.35■■□□□ 1.01
TSPAN3-208ENST00000560514 RAVER2Q9HCJ3 691 aaKnown RBP21.35■■□□□ 1.01
TSPAN3-208ENST00000560514 ARPP21Q9UBL0 812 aaPredicted RBP21.35■■□□□ 1.01
TSPAN3-208ENST00000560514 YBX2Q9Y2T7 364 aaKnown RBP21.35■■□□□ 1.01
TSPAN3-208ENST00000560514 SLC4A7Q9Y6M7 1214 aa21.35■■□□□ 1.01
TSPAN3-208ENST00000560514 ZBBXA8MT70 800 aa21.34■■□□□ 1.01
TSPAN3-208ENST00000560514 ZEB2O60315 1214 aa21.34■■□□□ 1.01
TSPAN3-208ENST00000560514 NDUFB10O96000 172 aa21.34■■□□□ 1.01
TSPAN3-208ENST00000560514 BEX3Q00994 111 aa21.34■■□□□ 1.01
TSPAN3-208ENST00000560514 TNFAIP2Q03169 654 aa21.34■■□□□ 1.01
TSPAN3-208ENST00000560514 SLFNL1Q499Z3 407 aa21.34■■□□□ 1.01
TSPAN3-208ENST00000560514 CTR9Q6PD62 1173 aa21.34■■□□□ 1.01
TSPAN3-208ENST00000560514 SEZ6LQ9BYH1 1024 aa21.34■■□□□ 1.01
TSPAN3-208ENST00000560514 BOLA2Q9H3K6 86 aa21.34■■□□□ 1.01
TSPAN3-208ENST00000560514 MYH7P12883 1935 aa21.33■■□□□ 1.01
TSPAN3-208ENST00000560514 RABGGTBP53611 331 aa21.33■■□□□ 1.01
TSPAN3-208ENST00000560514 CCL23P55773 120 aa21.33■■□□□ 1.01
TSPAN3-208ENST00000560514 ITGA7Q13683 1181 aa21.33■■□□□ 1.01
TSPAN3-208ENST00000560514 CXCL17Q6UXB2 119 aa21.33■■□□□ 1.01
TSPAN3-208ENST00000560514 CCDC144CPQ8IYA2 1237 aa21.33■■□□□ 1.01
TSPAN3-208ENST00000560514 NECAB3Q96P71 396 aaPredicted RBP21.33■■□□□ 1.01
TSPAN3-208ENST00000560514 AP5M1Q9H0R1 490 aa21.33■■□□□ 1.01
TSPAN3-208ENST00000560514 NYAP2Q9P242 653 aa21.33■■□□□ 1.01
TSPAN3-208ENST00000560514 MYH4Q9Y623 1939 aa21.32■■□□□ 1
TSPAN3-208ENST00000560514 GTPBP6O43824 516 aaPredicted RBP21.32■■□□□ 1
TSPAN3-208ENST00000560514 RLBP1P12271 317 aa21.32■■□□□ 1
TSPAN3-208ENST00000560514 UBE3CQ15386 1083 aa21.32■■□□□ 1
TSPAN3-208ENST00000560514 ZSCAN25Q6NSZ9 544 aa21.32■■□□□ 1
TSPAN3-208ENST00000560514 STK11IPQ8N1F8 1099 aa21.32■■□□□ 1
TSPAN3-208ENST00000560514 FEM1BQ9UK73 627 aa21.32■■□□□ 1
TSPAN3-208ENST00000560514 HCN4Q9Y3Q4 1203 aa21.32■■□□□ 1
TSPAN3-208ENST00000560514 PCDHA11Q9Y5I1 949 aa21.32■■□□□ 1
TSPAN3-208ENST00000560514 BMP1P13497 986 aa21.31■■□□□ 1
TSPAN3-208ENST00000560514 OAZ1P54368 228 aa21.31■■□□□ 1
TSPAN3-208ENST00000560514 FSCN1Q16658 493 aaKnown RBP21.31■■□□□ 1
TSPAN3-208ENST00000560514 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.31■■□□□ 1
TSPAN3-208ENST00000560514 TLK2Q86UE8 772 aa21.31■■□□□ 1
TSPAN3-208ENST00000560514 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.31■■□□□ 1
TSPAN3-208ENST00000560514 SLC38A10Q9HBR0 1119 aa21.31■■□□□ 1
TSPAN3-208ENST00000560514 HOMER2Q9NSB8 354 aa21.31■■□□□ 1
TSPAN3-208ENST00000560514 CLIP2Q9UDT6 1046 aa21.31■■□□□ 1
TSPAN3-208ENST00000560514 ISY1Q9ULR0 285 aaKnown RBP21.31■■□□□ 1
TSPAN3-208ENST00000560514 UMODL1Q5DID0 1318 aa21.3■■□□□ 1
TSPAN3-208ENST00000560514 ZBED9Q6R2W3 1325 aa21.3■■□□□ 1
TSPAN3-208ENST00000560514 HMMRO75330 724 aa21.3■■□□□ 1
TSPAN3-208ENST00000560514 NKX3-2P78367 333 aa21.3■■□□□ 1
TSPAN3-208ENST00000560514 TFF2Q03403 129 aa21.3■■□□□ 1
TSPAN3-208ENST00000560514 FGD4Q96M96 766 aa21.3■■□□□ 1
TSPAN3-208ENST00000560514 BDP1A6H8Y1 2624 aa21.3■■□□□ 1
TSPAN3-208ENST00000560514 CHD9Q3L8U1 2897 aa21.3■■□□□ 1
TSPAN3-208ENST00000560514 GREB1LQ9C091 1923 aaPredicted RBP21.29■■□□□ 1
TSPAN3-208ENST00000560514 ASB14A6NK59 587 aa21.29■■□□□ 1
TSPAN3-208ENST00000560514 CTAGE5O15320 804 aa21.29■■□□□ 1
TSPAN3-208ENST00000560514 ATP2A2P16615 1042 aaKnown RBP21.29■■□□□ 1
TSPAN3-208ENST00000560514 ATP5JP18859 108 aa21.29■■□□□ 1
TSPAN3-208ENST00000560514 RASA1P20936 1047 aa21.29■■□□□ 1
TSPAN3-208ENST00000560514 SLC43A3Q8NBI5 491 aa21.29■■□□□ 1
TSPAN3-208ENST00000560514 NOC4LQ9BVI4 516 aaKnown RBP21.29■■□□□ 1
TSPAN3-208ENST00000560514 ACAD9Q9H845 621 aa21.29■■□□□ 1
TSPAN3-208ENST00000560514 ZNF287Q9HBT7 754 aa21.29■■□□□ 1
TSPAN3-208ENST00000560514 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.28■■□□□ 1
TSPAN3-208ENST00000560514 MINDY4BA8MYZ0 360 aa21.28■■□□□ 1
TSPAN3-208ENST00000560514 DYNC1LI2O43237 492 aaPredicted RBP21.28■■□□□ 1
TSPAN3-208ENST00000560514 FDX1P10109 184 aa21.28■■□□□ 1
TSPAN3-208ENST00000560514 MYOGP15173 224 aa21.28■■□□□ 1
TSPAN3-208ENST00000560514 KCNQ1P51787 676 aa21.28■■□□□ 1
TSPAN3-208ENST00000560514 TMEM67Q5HYA8 995 aa21.28■■□□□ 1
TSPAN3-208ENST00000560514 ZNF444Q8N0Y2 327 aaPredicted RBP21.28■■□□□ 1
TSPAN3-208ENST00000560514 HAUS7Q99871 368 aa21.28■■□□□ 1
TSPAN3-208ENST00000560514 KATNBL1Q9H079 304 aa21.28■■□□□ 1
TSPAN3-208ENST00000560514 TRPV6Q9H1D0 765 aa21.28■■□□□ 1
TSPAN3-208ENST00000560514 COG6Q9Y2V7 657 aa21.28■■□□□ 1
TSPAN3-208ENST00000560514 ERC2O15083 957 aa21.27■■□□□ 1
TSPAN3-208ENST00000560514 B4GALT4O60513 344 aa21.27■■□□□ 1
TSPAN3-208ENST00000560514 RAB11FIP3O75154 756 aa21.27■■□□□ 1
TSPAN3-208ENST00000560514 PFKMP08237 780 aa21.27■■□□□ 1
TSPAN3-208ENST00000560514 CNTN2Q02246 1040 aa21.27■■□□□ 1
TSPAN3-208ENST00000560514 SBK1Q52WX2 424 aa21.27■■□□□ 1
TSPAN3-208ENST00000560514 PUS7LQ9H0K6 701 aaKnown RBP21.27■■□□□ 1
TSPAN3-208ENST00000560514 WNT8AQ9H1J5 351 aa21.27■■□□□ 1
TSPAN3-208ENST00000560514 GNEQ9Y223 722 aaKnown RBP21.27■■□□□ 1
TSPAN3-208ENST00000560514 HOXD11P31277 338 aaPredicted RBP21.26■□□□□ 0.99
TSPAN3-208ENST00000560514 IKQ13123 557 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms