RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 CCSAPQ6IQ19 270 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 ZNF589Q86UQ0 364 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 CHST13Q8NET6 341 aa12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 TRIM43Q96BQ3 446 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 EVI5LQ96CN4 794 aa12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 PRDM5Q9NQX1 630 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 ZHX1Q9UKY1 873 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 CNPY2Q9Y2B0 182 aa12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 GBF1Q92538 1859 aa12.05□□□□□ -0.48
SNRPA1-212ENST00000560496 CHD9Q3L8U1 2897 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 TANC1Q9C0D5 1861 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 TSPY2A6NKD2 308 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 ORC4O43929 436 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 PLA2G6O60733 806 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 SLC3A2P08195 630 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 FGRP09769 529 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 ITGB8P26012 769 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 CST5P28325 142 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 C9orf50Q5SZB4 431 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 ARMCX2Q7L311 632 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 RNF180Q86T96 592 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 FAM160B2Q86V87 743 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 KLHDC9Q8NEP7 349 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 DDX11Q96FC9 970 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 LBHD1Q9BQE6 289 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 A1CFQ9NQ94 594 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 HELLSQ9NRZ9 838 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 HOMER2Q9NSB8 354 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 MTMR10Q9NXD2 777 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 PRKAG2Q9UGJ0 569 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 FBXO40Q9UH90 709 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 STX8Q9UNK0 236 aa12.04□□□□□ -0.48
SNRPA1-212ENST00000560496 MYH6P13533 1939 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 FDX1P10109 184 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 SLC1A4P43007 532 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 SLC4A3P48751 1232 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 CNTN2Q02246 1040 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 TLE2Q04725 743 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 ACVR2BQ13705 512 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 ALX1Q15699 326 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 KCTD1Q719H9 257 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 ANKRD35Q8N283 1001 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 FAM133AQ8N9E0 248 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 STAG1Q8WVM7 1258 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 BADQ92934 168 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 CHMP4CQ96CF2 233 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 AGBL1Q96MI9 1066 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 LNPKQ9C0E8 428 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 UPF3AQ9H1J1 476 aaKnown RBP12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 ACAD9Q9H845 621 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 RNF146Q9NTX7 359 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 CHD7Q9P2D1 2997 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 REV3LO60673 3130 aa12.03□□□□□ -0.48
SNRPA1-212ENST00000560496 MOXD2PA6NHM9 499 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 CTAGE5O15320 804 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 DUSP11O75319 330 aaKnown RBP12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 CLTBP09497 229 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 MCCP23508 829 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 ACLYP53396 1101 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 NMIQ13287 307 aaPredicted RBP12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 SHHQ15465 462 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 MUM1L1Q5H9M0 696 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 PPP4R3BQ5MIZ7 849 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 TBC1D10CQ8IV04 446 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 SMC5Q8IY18 1101 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 CCDC144CPQ8IYA2 1237 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 GUCD1Q96NT3 240 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 TSEN34Q9BSV6 310 aaKnown RBP12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 ABHD16BQ9H3Z7 469 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 FAM184BQ9ULE4 1060 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 PRR12Q9ULL5 1215 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 STXBP5LQ9Y2K9 1186 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 CTDP1Q9Y5B0 961 aaPredicted RBP12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 DDX49Q9Y6V7 483 aaKnown RBP12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 CCDC171Q6TFL3 1326 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 MUC3AQ02505 3323 aa12.02□□□□□ -0.49
SNRPA1-212ENST00000560496 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 SOWAHBA6NEL2 793 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 POTEB2H3BUK9 544 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 KIAA0355O15063 1070 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 PQBP1O60828 265 aaKnown RBP12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 FGAP02671 866 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 HSPD1P10809 573 aaKnown RBP12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 EPHB4P54760 987 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 GJA9P57773 515 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 SNAP25P60880 206 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 NKX3-2P78367 333 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 FAAP100Q0VG06 881 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 IKQ13123 557 aaPredicted RBP12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 TKFCQ3LXA3 575 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 CCDC144BQ3MJ40 725 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 MCMDC2Q4G0Z9 681 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 ANKRD33Q7Z3H0 272 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 CHURC1Q8WUH1 139 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 RANBP17Q9H2T7 1088 aaKnown RBP12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 STARD7Q9NQZ5 370 aa12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 ISY1Q9ULR0 285 aaKnown RBP12.01□□□□□ -0.49
SNRPA1-212ENST00000560496 RANBP6O60518 1105 aaKnown RBP12□□□□□ -0.49
SNRPA1-212ENST00000560496 ASGR1P07306 291 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms