RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 ERICH6BQ5W0A0 696 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 FBXO46Q6PJ61 603 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-219ENST00000560483 C17orf99Q6UX52 265 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 GPRC5AQ8NFJ5 357 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 GTF3C2Q8WUA4 911 aaPredicted RBP9.43□□□□□ -0.9
LRRC28-219ENST00000560483 LPAR1Q92633 364 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 ESR2Q92731 530 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 CEP95Q96GE4 821 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 DSCC1Q9BVC3 393 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 VCPKMTQ9H867 229 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 ANO2Q9NQ90 1003 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 WDR70Q9NW82 654 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 TMX2Q9Y320 296 aa9.43□□□□□ -0.9
LRRC28-219ENST00000560483 MYPNQ86TC9 1320 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 WDR46O15213 610 aaKnown RBP9.42□□□□□ -0.9
LRRC28-219ENST00000560483 FOXP2O15409 715 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 NMT2O60551 498 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 PEX10O60683 326 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 CDC45O75419 566 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 HOXA7P31268 230 aaPredicted RBP9.42□□□□□ -0.9
LRRC28-219ENST00000560483 COG2Q14746 738 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 FAM110CQ1W6H9 321 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 PUS10Q3MIT2 529 aaKnown RBP9.42□□□□□ -0.9
LRRC28-219ENST00000560483 BMP2KLQ5H9B9 411 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 SLFN13Q68D06 897 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 CATSPERGQ6ZRH7 1159 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 RALYLQ86SE5 291 aaKnown RBP9.42□□□□□ -0.9
LRRC28-219ENST00000560483 NBPF11Q86T75 865 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 IQCA1Q86XH1 822 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 NEDD1Q8NHV4 660 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 C12orf42Q96LP6 360 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 NUP88Q99567 741 aaPredicted RBP9.42□□□□□ -0.9
LRRC28-219ENST00000560483 ZKSCAN3Q9BRR0 538 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 UBAC1Q9BSL1 405 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 HOXC10Q9NYD6 342 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 PTPN22Q9Y2R2 807 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 IVNS1ABPQ9Y6Y0 642 aa9.42□□□□□ -0.9
LRRC28-219ENST00000560483 MGAMO43451 1857 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 ZMYM6O95789 1325 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 ZSWIM8A7E2V4 1837 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 ERICH2A1L162 156 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 B4E1Z4 1266 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 F5H6K3 240 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 KDM4AO75164 1064 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 GNRH1P01148 92 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 BCRP11274 1271 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 PCP11498 1178 aaKnown RBP9.41□□□□□ -0.9
LRRC28-219ENST00000560483 SLC1A4P43007 532 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 ERVK-9P63128 1117 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 ERVK-24P63145 666 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 KLRC3Q07444 240 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 TBC1D10CQ8IV04 446 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 STAG1Q8WVM7 1258 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 KIFC2Q96AC6 838 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 TRIM47Q96LD4 638 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 PRR14Q9BWN1 585 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 KRT23Q9C075 422 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 CNNM2Q9H8M5 875 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 MTMR4Q9NYA4 1195 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 NYAP2Q9P242 653 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 ANAPC4Q9UJX5 808 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 PTCH2Q9Y6C5 1203 aa9.41□□□□□ -0.9
LRRC28-219ENST00000560483 NEDD4P46934 1319 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 SGSM2O43147 1006 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 ORC4O43929 436 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 NDUFB10O96000 172 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 MCCP23508 829 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 PTH1RQ03431 593 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 PRKCZQ05513 592 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 FOXC1Q12948 553 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 LCE2CQ5TA81 110 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 TREML4Q6UXN2 200 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 NCAPG2Q86XI2 1143 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 ATG4CQ96DT6 458 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 SLF1Q9BQI6 1058 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 ESYT1Q9BSJ8 1104 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.4□□□□□ -0.9
LRRC28-219ENST00000560483 IL25Q9H293 177 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 KAT14Q9H8E8 782 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 SRRDQ9UH36 339 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.4□□□□□ -0.9
LRRC28-219ENST00000560483 RABGAP1Q9Y3P9 1069 aa9.4□□□□□ -0.9
LRRC28-219ENST00000560483 ADGRA2Q96PE1 1338 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 TMEM232C9JQI7 657 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 DHX16O60231 1041 aaKnown RBP9.39□□□□□ -0.91
LRRC28-219ENST00000560483 ZBED4O75132 1171 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 BMP3P12645 472 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 CYP2B6P20813 491 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 MAPK4P31152 587 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 FLT3LGP49771 235 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 PRMT2P55345 433 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 SOX10P56693 466 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 UBXN2AP68543 259 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 SART3Q15020 963 aaKnown RBP9.39□□□□□ -0.91
LRRC28-219ENST00000560483 CCDC178Q5BJE1 867 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 KIAA1755Q5JYT7 1200 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 RNF20Q5VTR2 975 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 KCTD1Q719H9 257 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 SIAH1Q8IUQ4 282 aa9.39□□□□□ -0.91
LRRC28-219ENST00000560483 CPXCR1Q8N123 301 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms