RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 CDCP2Q5VXM1 449 aa5.52□□□□□ -1.53
SPG11-222ENST00000560435 FAM196AQ6ZSG2 479 aa5.52□□□□□ -1.53
SPG11-222ENST00000560435 JMJD8Q96S16 334 aa5.52□□□□□ -1.53
SPG11-222ENST00000560435 SUSD2Q9UGT4 822 aa5.52□□□□□ -1.53
SPG11-222ENST00000560435 ATE1O95260 518 aa5.51□□□□□ -1.53
SPG11-222ENST00000560435 POLR2BP30876 1174 aaKnown RBP5.51□□□□□ -1.53
SPG11-222ENST00000560435 CCNFP41002 786 aa5.51□□□□□ -1.53
SPG11-222ENST00000560435 CTSKP43235 329 aa5.51□□□□□ -1.53
SPG11-222ENST00000560435 MAGEA10P43363 369 aaPredicted RBP5.51□□□□□ -1.53
SPG11-222ENST00000560435 NT5DC1Q5TFE4 455 aa5.51□□□□□ -1.53
SPG11-222ENST00000560435 OVOS1Q6IE37 1185 aa5.51□□□□□ -1.53
SPG11-222ENST00000560435 TMC4Q7Z404 712 aa5.51□□□□□ -1.53
SPG11-222ENST00000560435 FNIP1Q8TF40 1166 aa5.51□□□□□ -1.53
SPG11-222ENST00000560435 CRELD1Q96HD1 420 aa5.51□□□□□ -1.53
SPG11-222ENST00000560435 LRRC3Q9BY71 257 aa5.51□□□□□ -1.53
SPG11-222ENST00000560435 CNNM2Q9H8M5 875 aa5.51□□□□□ -1.53
SPG11-222ENST00000560435 SRGAP3O43295 1099 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 PLA2G1BP04054 148 aaKnown RBP5.5□□□□□ -1.53
SPG11-222ENST00000560435 VAV1P15498 845 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 TNFRSF1AP19438 455 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 HTRA3P83110 453 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 MVKQ03426 396 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 SAPCD2Q86UD0 394 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 LSRQ86X29 649 aaPredicted RBP5.5□□□□□ -1.53
SPG11-222ENST00000560435 AEBP1Q8IUX7 1158 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 TMEM52Q8NDY8 209 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 ZNF512BQ96KM6 892 aaPredicted RBP5.5□□□□□ -1.53
SPG11-222ENST00000560435 SPATA25Q9BR10 227 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 AP5S1Q9NUS5 200 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 GFOD1Q9NXC2 390 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 PRR13Q9NZ81 148 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 PCDHB14Q9Y5E9 798 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 PMF1-BGLAPU3KQ54 211 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 ROBO2Q9HCK4 1378 aa5.5□□□□□ -1.53
SPG11-222ENST00000560435 A0A1B0GTL3 188 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 SH3D21A4FU49 640 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 ANKRD33BA6NCL7 494 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 MEIS1O00470 390 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 TLR3O15455 904 aaKnown RBP5.49□□□□□ -1.53
SPG11-222ENST00000560435 AKAP8O43823 692 aaKnown RBP5.49□□□□□ -1.53
SPG11-222ENST00000560435 CYBBP04839 570 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 ADAM17P78536 824 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 FOXO4P98177 505 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 RTP2Q5QGT7 225 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 PAQR3Q6TCH7 311 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 CRTC3Q6UUV7 619 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 FERMT3Q86UX7 667 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 ADGRG2Q8IZP9 1017 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 BRMS1Q9HCU9 246 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 PCDHB12Q9Y5F1 795 aa5.49□□□□□ -1.53
SPG11-222ENST00000560435 DBHP09172 617 aa5.48□□□□□ -1.53
SPG11-222ENST00000560435 ZXDAP98168 799 aa5.48□□□□□ -1.53
SPG11-222ENST00000560435 XPCQ01831 940 aaPredicted RBP5.48□□□□□ -1.53
SPG11-222ENST00000560435 NLRC3Q7RTR2 1065 aa5.48□□□□□ -1.53
SPG11-222ENST00000560435 ATG4CQ96DT6 458 aa5.48□□□□□ -1.53
SPG11-222ENST00000560435 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
SPG11-222ENST00000560435 MKRN2Q9H000 416 aaKnown RBP5.48□□□□□ -1.53
SPG11-222ENST00000560435 RNF38Q9H0F5 515 aa5.48□□□□□ -1.53
SPG11-222ENST00000560435 KCNQ5Q9NR82 932 aa5.48□□□□□ -1.53
SPG11-222ENST00000560435 A0A1W2PQ27 194 aa5.47□□□□□ -1.53
SPG11-222ENST00000560435 A0A1W2PQ64 194 aa5.47□□□□□ -1.53
SPG11-222ENST00000560435 A0A1W2PQC6 194 aa5.47□□□□□ -1.53
SPG11-222ENST00000560435 A0A1W2PQD8 194 aa5.47□□□□□ -1.53
SPG11-222ENST00000560435 MINDY4BA8MYZ0 360 aa5.47□□□□□ -1.53
SPG11-222ENST00000560435 ITGB3P05106 788 aa5.47□□□□□ -1.53
SPG11-222ENST00000560435 GSNP06396 782 aa5.47□□□□□ -1.53
SPG11-222ENST00000560435 ATF2P15336 505 aa5.47□□□□□ -1.53
SPG11-222ENST00000560435 DLX2Q07687 328 aaPredicted RBP5.47□□□□□ -1.53
SPG11-222ENST00000560435 HLA-DQA1Q5Y7H0 255 aa5.47□□□□□ -1.53
SPG11-222ENST00000560435 EHMT1Q9H9B1 1298 aa5.47□□□□□ -1.53
SPG11-222ENST00000560435 FBXL21Q9UKT6 434 aa5.47□□□□□ -1.53
SPG11-222ENST00000560435 MATN3O15232 486 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 SUV39H1O43463 412 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 NOBOXO60393 691 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 CNR2P34972 360 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 FBXL19Q6PCT2 694 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 TMEM192Q8IY95 271 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 NAT16Q8N8M0 369 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 ZNF526Q8TF50 670 aaPredicted RBP5.46□□□□□ -1.54
SPG11-222ENST00000560435 FAM161BQ96MY7 647 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 LNPKQ9C0E8 428 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 SMPD4Q9NXE4 827 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 PLA2G2DQ9UNK4 145 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 FAN1Q9Y2M0 1017 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 HCFC2Q9Y5Z7 792 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 DUSP10Q9Y6W6 482 aa5.46□□□□□ -1.54
SPG11-222ENST00000560435 C1QTNF3-AMACRE9PGA6 284 aa5.45□□□□□ -1.54
SPG11-222ENST00000560435 AUHQ13825 339 aaKnown RBP5.45□□□□□ -1.54
SPG11-222ENST00000560435 BICRALQ6AI39 1079 aa5.45□□□□□ -1.54
SPG11-222ENST00000560435 CYP2R1Q6VVX0 501 aa5.45□□□□□ -1.54
SPG11-222ENST00000560435 JAMLQ86YT9 394 aa5.45□□□□□ -1.54
SPG11-222ENST00000560435 CARFQ8N187 725 aa5.45□□□□□ -1.54
SPG11-222ENST00000560435 SLC6A18Q96N87 628 aa5.45□□□□□ -1.54
SPG11-222ENST00000560435 SLC12A9Q9BXP2 914 aa5.45□□□□□ -1.54
SPG11-222ENST00000560435 ANTXR1Q9H6X2 564 aa5.45□□□□□ -1.54
SPG11-222ENST00000560435 PDLIM7Q9NR12 457 aa5.45□□□□□ -1.54
SPG11-222ENST00000560435 KBTBD4Q9NVX7 518 aa5.45□□□□□ -1.54
SPG11-222ENST00000560435 SUPT16HQ9Y5B9 1047 aaKnown RBP5.45□□□□□ -1.54
SPG11-222ENST00000560435 A0A1W2PQJ5 194 aa5.44□□□□□ -1.54
SPG11-222ENST00000560435 TNFRSF10CO14798 259 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms