RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 SNX11Q9Y5W9 270 aa8.1□□□□□ -1.11
MARK3-220ENST00000560417 MEIS1O00470 390 aa8.09□□□□□ -1.11
MARK3-220ENST00000560417 MSTNO14793 375 aa8.09□□□□□ -1.11
MARK3-220ENST00000560417 PLD2O14939 933 aa8.09□□□□□ -1.11
MARK3-220ENST00000560417 CYP26A1O43174 497 aa8.09□□□□□ -1.11
MARK3-220ENST00000560417 C6orf222P0C671 652 aaPredicted RBP8.09□□□□□ -1.11
MARK3-220ENST00000560417 FOSL1P15407 271 aa8.09□□□□□ -1.11
MARK3-220ENST00000560417 NCLP19338 710 aaKnown RBP8.09□□□□□ -1.11
MARK3-220ENST00000560417 SUMO1P63165 101 aaKnown RBP8.09□□□□□ -1.11
MARK3-220ENST00000560417 CBX2Q14781 532 aaPredicted RBP8.09□□□□□ -1.11
MARK3-220ENST00000560417 IFI16Q16666 785 aaKnown RBP8.09□□□□□ -1.11
MARK3-220ENST00000560417 SLC35F1Q5T1Q4 408 aa8.09□□□□□ -1.11
MARK3-220ENST00000560417 CDKAL1Q5VV42 579 aa8.09□□□□□ -1.11
MARK3-220ENST00000560417 PLD6Q8N2A8 252 aaKnown RBP8.09□□□□□ -1.11
MARK3-220ENST00000560417 NETO1Q8TDF5 533 aa8.09□□□□□ -1.11
MARK3-220ENST00000560417 LRRC4CQ9HCJ2 640 aa8.09□□□□□ -1.11
MARK3-220ENST00000560417 ZC3H7BQ9UGR2 993 aaKnown RBP8.09□□□□□ -1.11
MARK3-220ENST00000560417 PRKAB1Q9Y478 270 aa8.09□□□□□ -1.11
MARK3-220ENST00000560417 H3BS24 57 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 AURKAO14965 403 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 KCNQ2O43526 872 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 ZNF205O95201 554 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 CPP00450 1065 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 TPP2P29144 1249 aaPredicted RBP8.08□□□□□ -1.12
MARK3-220ENST00000560417 FNDC3BQ53EP0 1204 aaKnown RBP8.08□□□□□ -1.12
MARK3-220ENST00000560417 TRIM61Q5EBN2 209 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 CWF19L1Q69YN2 538 aaKnown RBP8.08□□□□□ -1.12
MARK3-220ENST00000560417 ARHGAP27Q6ZUM4 889 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 TMEM145Q8NBT3 493 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 LINC00116Q8NCU8 138 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 KREMEN2Q8NCW0 462 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 KCTD13Q8WZ19 329 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 FCRL3Q96P31 734 aaPredicted RBP8.08□□□□□ -1.12
MARK3-220ENST00000560417 SLC12A9Q9BXP2 914 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 MRPL4Q9BYD3 311 aaKnown RBP8.08□□□□□ -1.12
MARK3-220ENST00000560417 TMX1Q9H3N1 280 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 PLAAQ9Y263 795 aa8.08□□□□□ -1.12
MARK3-220ENST00000560417 PITPNM2Q9BZ72 1349 aa8.07□□□□□ -1.12
MARK3-220ENST00000560417 VAV1P15498 845 aa8.07□□□□□ -1.12
MARK3-220ENST00000560417 NTRK3Q16288 839 aa8.07□□□□□ -1.12
MARK3-220ENST00000560417 DPY19L1Q2PZI1 675 aa8.07□□□□□ -1.12
MARK3-220ENST00000560417 NINJ1Q92982 152 aa8.07□□□□□ -1.12
MARK3-220ENST00000560417 CLUHP3Q96NS8 147 aa8.07□□□□□ -1.12
MARK3-220ENST00000560417 IPO9Q96P70 1041 aaKnown RBP8.07□□□□□ -1.12
MARK3-220ENST00000560417 SLKQ9H2G2 1235 aaPredicted RBP8.07□□□□□ -1.12
MARK3-220ENST00000560417 ZSWIM5Q9P217 1185 aa8.07□□□□□ -1.12
MARK3-220ENST00000560417 TMEM265A0A087WTH1 108 aa8.06□□□□□ -1.12
MARK3-220ENST00000560417 CD3EP07766 207 aa8.06□□□□□ -1.12
MARK3-220ENST00000560417 SNRPB2P08579 225 aaKnown RBP8.06□□□□□ -1.12
MARK3-220ENST00000560417 NOP2P46087 812 aaKnown RBP8.06□□□□□ -1.12
MARK3-220ENST00000560417 SCRN1Q12765 414 aa8.06□□□□□ -1.12
MARK3-220ENST00000560417 PABPC4Q13310 644 aaKnown RBP eCLIP8.06□□□□□ -1.12
MARK3-220ENST00000560417 PRSS53Q2L4Q9 553 aa8.06□□□□□ -1.12
MARK3-220ENST00000560417 RTP2Q5QGT7 225 aa8.06□□□□□ -1.12
MARK3-220ENST00000560417 DENND5AQ6IQ26 1287 aa8.06□□□□□ -1.12
MARK3-220ENST00000560417 UBE2FQ969M7 185 aa8.06□□□□□ -1.12
MARK3-220ENST00000560417 STXBP3O00186 592 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 RAPGEF3O95398 923 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 IGHA1P01876 353 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 IFNGR1P15260 489 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 HOXA10P31260 410 aaPredicted RBP8.05□□□□□ -1.12
MARK3-220ENST00000560417 MASP1P48740 699 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 TESK1Q15569 626 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 MSMPQ1L6U9 139 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 TM4SF20Q53R12 229 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 RNF187Q5TA31 235 aaPredicted RBP8.05□□□□□ -1.12
MARK3-220ENST00000560417 TMPRSS7Q7RTY8 843 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 GSTCDQ8NEC7 633 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 NPLOC4Q8TAT6 608 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 GPATCH3Q96I76 525 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 IFT57Q9NWB7 429 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 ZNF281Q9Y2X9 895 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 BACE2Q9Y5Z0 518 aa8.05□□□□□ -1.12
MARK3-220ENST00000560417 C2orf71A6NGG8 1288 aa8.04□□□□□ -1.12
MARK3-220ENST00000560417 ARNTLO00327 626 aa8.04□□□□□ -1.12
MARK3-220ENST00000560417 TGFB1P01137 390 aa8.04□□□□□ -1.12
MARK3-220ENST00000560417 ESR1P03372 595 aa8.04□□□□□ -1.12
MARK3-220ENST00000560417 THBDP07204 575 aa8.04□□□□□ -1.12
MARK3-220ENST00000560417 TAF7LQ5H9L4 462 aa8.04□□□□□ -1.12
MARK3-220ENST00000560417 RCSD1Q6JBY9 416 aa8.04□□□□□ -1.12
MARK3-220ENST00000560417 FRS2Q8WU20 508 aa8.04□□□□□ -1.12
MARK3-220ENST00000560417 TRIM39Q9HCM9 518 aa8.04□□□□□ -1.12
MARK3-220ENST00000560417 DUSP13Q9UII6 198 aa8.04□□□□□ -1.12
MARK3-220ENST00000560417 TCFL5Q9UL49 500 aa8.04□□□□□ -1.12
MARK3-220ENST00000560417 SYPP08247 313 aa8.03□□□□□ -1.12
MARK3-220ENST00000560417 ECI1P42126 302 aa8.03□□□□□ -1.12
MARK3-220ENST00000560417 KCNJ6P48051 423 aa8.03□□□□□ -1.12
MARK3-220ENST00000560417 PCBP3P57721 371 aaKnown RBP8.03□□□□□ -1.12
MARK3-220ENST00000560417 GABREP78334 506 aa8.03□□□□□ -1.12
MARK3-220ENST00000560417 C21orf62-AS1Q17RA5 79 aa8.03□□□□□ -1.12
MARK3-220ENST00000560417 ACBD5Q5T8D3 534 aaPredicted RBP8.03□□□□□ -1.12
MARK3-220ENST00000560417 RNF111Q6ZNA4 994 aa8.03□□□□□ -1.12
MARK3-220ENST00000560417 FILIP1Q7Z7B0 1213 aa8.03□□□□□ -1.12
MARK3-220ENST00000560417 NIM1KQ8IY84 436 aa8.03□□□□□ -1.12
MARK3-220ENST00000560417 SLC7A14Q8TBB6 771 aa8.03□□□□□ -1.12
MARK3-220ENST00000560417 PTPRN2Q92932 1015 aa8.03□□□□□ -1.12
MARK3-220ENST00000560417 MFSD3Q96ES6 412 aa8.03□□□□□ -1.12
MARK3-220ENST00000560417 FOXP3Q9BZS1 431 aa8.03□□□□□ -1.12
MARK3-220ENST00000560417 BRINP2Q9C0B6 783 aa8.03□□□□□ -1.12
MARK3-220ENST00000560417 SPC25Q9HBM1 224 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms