RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 ARMCX5Q6P1M9 558 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 SLC4A10Q6U841 1118 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 G2E3Q7L622 706 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 HDXQ7Z353 690 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 TMC6Q7Z403 805 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 CCDC91Q7Z6B0 441 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 HOMER1Q86YM7 354 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 C10orf67Q8IYJ2 551 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 AOPEPQ8N6M6 819 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 CEP112Q8N8E3 955 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 MSANTD4Q8NCY6 345 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 FAM71BQ8TC56 605 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 EDARADDQ8WWZ3 215 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 CRELD1Q96HD1 420 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 TINF2Q9BSI4 451 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 CARD6Q9BX69 1037 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 CFHR5Q9BXR6 569 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 MED4Q9NPJ6 270 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 ECHDC1Q9NTX5 307 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 TSPYL4Q9UJ04 414 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 ADAM21Q9UKJ8 722 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 RAB21Q9UL25 225 aa6.81□□□□□ -1.32
SNRPA1-209ENST00000560307 OPLAHO14841 1288 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 SURF6O75683 361 aaKnown RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 SASH3O75995 380 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 URI1O94763 535 aaPredicted RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 YEATS4O95619 227 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 RPLP1P05386 114 aaKnown RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 PHKA2P46019 1235 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 EIF5P55010 431 aaKnown RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 PTH1RQ03431 593 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 PPP2R3AQ06190 1150 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 APOBRQ0VD83 1088 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 TOB2Q14106 344 aaPredicted RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 DCTN1Q14203 1278 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 LONRF2Q1L5Z9 754 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 GORABQ5T7V8 394 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 C1orf53Q5VUE5 145 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 USPL1Q5W0Q7 1092 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 MCTP2Q6DN12 878 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 CWC27Q6UX04 472 aaKnown RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 BICDL1Q6ZP65 573 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 MMS22LQ6ZRQ5 1243 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 DDX60Q8IY21 1712 aaKnown RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 CLASRPQ8N2M8 674 aaKnown RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 MRPS27Q92552 414 aaKnown RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 DHX38Q92620 1227 aaKnown RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 PTPRUQ92729 1446 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 ERCC4Q92889 916 aaPredicted RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 FRMD6Q96NE9 622 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 GAS2L1Q99501 681 aaPredicted RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 XPO4Q9C0E2 1151 aaKnown RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 USP44Q9H0E7 712 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 VIPAS39Q9H9C1 493 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 NEUROD4Q9HD90 331 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 NLRP2Q9NX02 1062 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 NOP53Q9NZM5 478 aaKnown RBP6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 INPP5FQ9Y2H2 1132 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 USP20Q9Y2K6 914 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 PCDHGB7Q9Y5F8 929 aa6.8□□□□□ -1.32
SNRPA1-209ENST00000560307 MAP3K15Q6ZN16 1313 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 ATXN2Q99700 1313 aaKnown RBP6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 SPEF2Q9C093 1822 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 A0A087WUV0 522 aaPredicted RBP6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 F6X3S4 739 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 H3BQV1 296 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 STX10O60499 249 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 ALDH1L1O75891 902 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 YBX3P16989 372 aaKnown RBP eCLIP6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 LMAN1P49257 510 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 GSCP56915 257 aaPredicted RBP6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 HIF1AQ16665 826 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 RSPO4Q2I0M5 234 aaPredicted RBP6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 ZNF394Q53GI3 561 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 ADALQ6DHV7 355 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 SULT6B1Q6IMI4 303 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 LINC00114Q6XXX2 140 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 C1orf229Q6ZS94 237 aaPredicted RBP6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 DPH6Q7L8W6 267 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 PPP1R42Q7Z4L9 355 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 WAPLQ7Z5K2 1190 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 FERMT3Q86UX7 667 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 ELOA2Q8IYF1 753 aaPredicted RBP6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 ZNF295-AS1Q8N0V1 137 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 FMR1NBQ8N0W7 255 aaPredicted RBP6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 CMTR1Q8N1G2 835 aaKnown RBP6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 CEP120Q8N960 986 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 NECAB1Q8N987 351 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 FSIP1Q8NA03 581 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 LRRN4CLQ8ND94 238 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 CTCFLQ8NI51 663 aaPredicted RBP6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 BRF1Q92994 677 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 HSH2DQ96JZ2 352 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 IL1RAPL2Q9NP60 686 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 RTEL1Q9NZ71 1219 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 FOXD3Q9UJU5 478 aaPredicted RBP6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 BCS1LQ9Y276 419 aa6.79□□□□□ -1.32
SNRPA1-209ENST00000560307 CEMIPQ8WUJ3 1361 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms