RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 MED21Q13503 144 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 PI4KAP1Q8N8J0 262 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 TBC1D7Q9P0N9 293 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 CCDC61Q9Y6R9 512 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 H7C0C1 242 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 XRCC5P13010 732 aaKnown RBP15.08■□□□□ 0
CSPG4P12-202ENST00000559989 ATP5OP48047 213 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 PIK3AP1Q6ZUJ8 805 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 GFM2Q969S9 779 aaKnown RBP15.08■□□□□ 0
CSPG4P12-202ENST00000559989 EPAS1Q99814 870 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 DDX28Q9NUL7 540 aaKnown RBP15.08■□□□□ 0
CSPG4P12-202ENST00000559989 TAB2Q9NYJ8 693 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 IVNS1ABPQ9Y6Y0 642 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 SPAG7O75391 227 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 CNOT10Q9H9A5 744 aaKnown RBP15.08■□□□□ 0
CSPG4P12-202ENST00000559989 NCF2P19878 526 aaPredicted RBP15.08■□□□□ 0
CSPG4P12-202ENST00000559989 SEPT2Q15019 361 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 C11orf95C9JLR9 678 aaPredicted RBP15.08■□□□□ 0
CSPG4P12-202ENST00000559989 GSNP06396 782 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 TXKP42681 527 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 PDE1AP54750 535 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 ANKRD2Q9GZV1 360 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 KIF9Q9HAQ2 790 aa15.08■□□□□ 0
CSPG4P12-202ENST00000559989 PLEKHA4Q9H4M7 779 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 MSH2P43246 934 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 ANGPTL8Q6UXH0 198 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 TTC6Q86TZ1 520 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 THOC5Q13769 683 aaKnown RBP15.07■□□□□ 0
CSPG4P12-202ENST00000559989 SESTD1Q86VW0 696 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 LZTS2Q9BRK4 669 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 WARS2Q9UGM6 360 aaKnown RBP15.07■□□□□ 0
CSPG4P12-202ENST00000559989 MID2Q9UJV3 735 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 DDIT3P35638 169 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 C20orf194Q5TEA3 1177 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 IFNL2Q8IZJ0 200 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 ZBTB18Q99592 522 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 ATP11BQ9Y2G3 1177 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 EPRSP07814 1512 aaKnown RBP15.07■□□□□ 0
CSPG4P12-202ENST00000559989 DDX39AO00148 427 aaKnown RBP15.07■□□□□ 0
CSPG4P12-202ENST00000559989 ECM2O94769 699 aaPredicted RBP15.07■□□□□ 0
CSPG4P12-202ENST00000559989 KIF19Q2TAC6 998 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 C6orf118Q5T5N4 469 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 ZC3H12CQ9C0D7 883 aaKnown RBP15.07■□□□□ 0
CSPG4P12-202ENST00000559989 CBX8Q9HC52 389 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 TLK1Q9UKI8 766 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 ZNF148Q9UQR1 794 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 RRP15Q9Y3B9 282 aaKnown RBP15.07■□□□□ 0
CSPG4P12-202ENST00000559989 ZNF202O95125 648 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 KRT7P08729 469 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 SKAP1Q86WV1 359 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 SNX29Q8TEQ0 813 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 USP26Q9BXU7 913 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 ARHGAP26Q9UNA1 814 aa15.07■□□□□ 0
CSPG4P12-202ENST00000559989 POGZQ7Z3K3 1410 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 CECR2Q9BXF3 1484 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 GRM8O00222 908 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 MAPK13O15264 365 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 KRT75O95678 551 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 ABCB4P21439 1286 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 PTPREP23469 700 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 OPTNQ96CV9 577 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 JPH2Q9BR39 696 aaPredicted RBP15.06■□□□□ 0
CSPG4P12-202ENST00000559989 E2F6O75461 281 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 DAB1O75553 588 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 TCP1P17987 556 aaKnown RBP15.06■□□□□ 0
CSPG4P12-202ENST00000559989 TTC38Q5R3I4 469 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 SH3GL3Q99963 347 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 SESN1Q9Y6P5 492 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 GRAMD1BQ3KR37 738 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 TMEM87BQ96K49 555 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 EYA3Q99504 573 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 C1orf112Q9NSG2 853 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 NBPF10Q6P3W6 841 aaKnown RBP15.06■□□□□ 0
CSPG4P12-202ENST00000559989 CERS3Q8IU89 383 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 CCHCR1Q8TD31 782 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 DPH5Q9H2P9 285 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 ZNF229Q9UJW7 825 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 PPARGP37231 505 aaPredicted RBP15.06■□□□□ 0
CSPG4P12-202ENST00000559989 NCOA2Q15596 1464 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 EHBP1L1Q8N3D4 1523 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 GUCY2CP25092 1073 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 TEDDM1Q5T9Z0 273 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 FAM193BQ96PV7 902 aaPredicted RBP15.06■□□□□ 0
CSPG4P12-202ENST00000559989 MMS19Q96T76 1030 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 PTPN22Q9Y2R2 807 aa15.06■□□□□ 0
CSPG4P12-202ENST00000559989 TRPC1P48995 793 aa15.05■□□□□ 0
CSPG4P12-202ENST00000559989 YWHAHQ04917 246 aaPredicted RBP15.05■□□□□ 0
CSPG4P12-202ENST00000559989 PLEKHM3Q6ZWE6 761 aa15.05■□□□□ 0
CSPG4P12-202ENST00000559989 RNF169Q8NCN4 708 aa15.05■□□□□ 0
CSPG4P12-202ENST00000559989 NT5C3AQ9H0P0 336 aa15.05■□□□□ 0
CSPG4P12-202ENST00000559989 INTUQ9ULD6 942 aa15.05■□□□□ 0
CSPG4P12-202ENST00000559989 HECW1Q76N89 1606 aa15.05■□□□□ 0
CSPG4P12-202ENST00000559989 PSMC1P62191 440 aaKnown RBP15.05■□□□□ 0
CSPG4P12-202ENST00000559989 HIF1AQ16665 826 aa15.05■□□□□ 0
CSPG4P12-202ENST00000559989 DEPDC1BQ8WUY9 529 aa15.05■□□□□ 0
CSPG4P12-202ENST00000559989 CAPRIN1Q14444 709 aaKnown RBP15.05■□□□□ -0
CSPG4P12-202ENST00000559989 TEX11Q8IYF3 940 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 JDP2Q8WYK2 163 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 SNX19Q92543 992 aa15.05■□□□□ -0
CSPG4P12-202ENST00000559989 RXRAP19793 462 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms