RNA–Protein interactions for RNA: ENST00000559511.5

SPG11-217, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-217ENST00000559511 CRKP46108 304 aa12.51□□□□□ -0.41
SPG11-217ENST00000559511 FKBP1AP62942 108 aaKnown RBP12.51□□□□□ -0.41
SPG11-217ENST00000559511 AOC3Q16853 763 aa12.51□□□□□ -0.41
SPG11-217ENST00000559511 NAALADL2Q58DX5 795 aa12.51□□□□□ -0.41
SPG11-217ENST00000559511 CDKAL1Q5VV42 579 aa12.51□□□□□ -0.41
SPG11-217ENST00000559511 SPECC1LQ69YQ0 1117 aa12.51□□□□□ -0.41
SPG11-217ENST00000559511 DTHD1Q6ZMT9 781 aa12.51□□□□□ -0.41
SPG11-217ENST00000559511 CLEC10AQ8IUN9 316 aa12.51□□□□□ -0.41
SPG11-217ENST00000559511 RRP36Q96EU6 259 aaKnown RBP12.51□□□□□ -0.41
SPG11-217ENST00000559511 PIGSQ96S52 555 aa12.51□□□□□ -0.41
SPG11-217ENST00000559511 UBA5Q9GZZ9 404 aa12.51□□□□□ -0.41
SPG11-217ENST00000559511 VAT1LQ9HCJ6 419 aa12.51□□□□□ -0.41
SPG11-217ENST00000559511 DISC1Q9NRI5 854 aa12.51□□□□□ -0.41
SPG11-217ENST00000559511 CTNND2Q9UQB3 1225 aa12.51□□□□□ -0.41
SPG11-217ENST00000559511 FRMPD2Q68DX3 1309 aaPredicted RBP12.51□□□□□ -0.41
SPG11-217ENST00000559511 SMCO2A6NFE2 343 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 PDHBP11177 359 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 AKR1B1P15121 316 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 TXLNAP40222 546 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 STAT6P42226 847 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 KIAA0825Q8IV33 1275 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 FAM177A1Q8N128 213 aaPredicted RBP12.5□□□□□ -0.41
SPG11-217ENST00000559511 TC2NQ8N9U0 490 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 ZDHHC15Q96MV8 337 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 MTMR4Q9NYA4 1195 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 PCDHAC2Q9Y5I4 1007 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 TEX33O43247 280 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 SMARCA1P28370 1054 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 BAG6P46379 1132 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 MTERF4Q7Z6M4 381 aaKnown RBP12.5□□□□□ -0.41
SPG11-217ENST00000559511 LRRC47Q8N1G4 583 aaKnown RBP12.5□□□□□ -0.41
SPG11-217ENST00000559511 LRRC15Q8TF66 581 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 ANKRD7Q92527 254 aa12.5□□□□□ -0.41
SPG11-217ENST00000559511 SEC63Q9UGP8 760 aaKnown RBP12.5□□□□□ -0.41
SPG11-217ENST00000559511 IGKV6D-41A0A0C4DH26 115 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 KIF2AO00139 706 aaPredicted RBP12.49□□□□□ -0.41
SPG11-217ENST00000559511 RPN1P04843 607 aaKnown RBP12.49□□□□□ -0.41
SPG11-217ENST00000559511 ADKP55263 362 aaKnown RBP12.49□□□□□ -0.41
SPG11-217ENST00000559511 EIF6P56537 245 aaKnown RBP12.49□□□□□ -0.41
SPG11-217ENST00000559511 NCBP1Q09161 790 aaKnown RBP12.49□□□□□ -0.41
SPG11-217ENST00000559511 NFIAQ12857 509 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 RRAGBQ5VZM2 374 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 CC2D2BQ6DHV5 1058 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 KIF18AQ8NI77 898 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 CCDC12Q8WUD4 166 aaPredicted RBP12.49□□□□□ -0.41
SPG11-217ENST00000559511 MRIQ9BWK5 157 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 RIOX1Q9H6W3 641 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 LAD1O00515 517 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 C21orf2O43822 256 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
SPG11-217ENST00000559511 NAA30Q147X3 362 aaPredicted RBP12.49□□□□□ -0.41
SPG11-217ENST00000559511 ZNF658Q5TYW1 1059 aaPredicted RBP12.49□□□□□ -0.41
SPG11-217ENST00000559511 SYT10Q6XYQ8 523 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 KRT25Q7Z3Z0 450 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 PLIN2Q99541 437 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 C6orf50Q9HD87 102 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 ADD3Q9UEY8 706 aaKnown RBP12.49□□□□□ -0.41
SPG11-217ENST00000559511 SERPINB13Q9UIV8 391 aa12.49□□□□□ -0.41
SPG11-217ENST00000559511 CCNT1O60563 726 aaKnown RBP12.48□□□□□ -0.41
SPG11-217ENST00000559511 GNA11P29992 359 aa12.48□□□□□ -0.41
SPG11-217ENST00000559511 SHMT1P34896 483 aa12.48□□□□□ -0.41
SPG11-217ENST00000559511 PRPHP41219 470 aa12.48□□□□□ -0.41
SPG11-217ENST00000559511 HDLBPQ00341 1268 aaKnown RBP12.48□□□□□ -0.41
SPG11-217ENST00000559511 NONOQ15233 471 aaKnown RBP eCLIP12.48□□□□□ -0.41
SPG11-217ENST00000559511 LETM2Q2VYF4 491 aa12.48□□□□□ -0.41
SPG11-217ENST00000559511 ZFPM1Q8IX07 1006 aa12.48□□□□□ -0.41
SPG11-217ENST00000559511 BAG1Q99933 345 aaPredicted RBP12.48□□□□□ -0.41
SPG11-217ENST00000559511 CCSER1Q9C0I3 900 aa12.48□□□□□ -0.41
SPG11-217ENST00000559511 TMEM260Q9NX78 707 aa12.48□□□□□ -0.41
SPG11-217ENST00000559511 BIN2Q9UBW5 565 aaPredicted RBP12.48□□□□□ -0.41
SPG11-217ENST00000559511 GDAQ9Y2T3 454 aa12.48□□□□□ -0.41
SPG11-217ENST00000559511 ARHGAP6O43182 974 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 OR52Z1P0C646 297 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 SLURP2P0DP57 97 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 SNHG28P0DPA3 235 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 PBX1P40424 430 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 UBA7P41226 1012 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 REXO1L1PQ8IX06 675 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 RASSF8Q8NHQ8 419 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 ARID3AQ99856 593 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 RMND1Q9NWS8 449 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 SWAP70Q9UH65 585 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 RWDD2AQ9UIY3 292 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 MAPK8IP1Q9UQF2 711 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 MYO3BQ8WXR4 1341 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 YDJCA8MPS7 323 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 PRCPP42785 496 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 CACNB3P54284 484 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 PAK1Q13153 545 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 ASPRV1Q53RT3 343 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 SOGA3Q5TF21 947 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 JAKMIP3Q5VZ66 844 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 NEK8Q86SG6 692 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 REXO1Q8N1G1 1221 aaKnown RBP12.47□□□□□ -0.41
SPG11-217ENST00000559511 SUPT20HQ8NEM7 779 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 TBCKQ8TEA7 893 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 NELFBQ8WX92 580 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 COA7Q96BR5 231 aa12.47□□□□□ -0.41
SPG11-217ENST00000559511 ZNF215Q9UL58 517 aaPredicted RBP12.47□□□□□ -0.41
SPG11-217ENST00000559511 ARFGEF1Q9Y6D6 1849 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms