RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 DLX3O60479 287 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 ALDH1L1O75891 902 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 DNAJC8O75937 253 aaPredicted RBP3.07□□□□□ -1.92
GABPB1-209ENST00000559100 RASGRP1O95267 797 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 CBX7O95931 251 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 ASLP04424 464 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 JMJD7P0C870 316 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 ITIH2P19823 946 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 IGFALSP35858 605 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 CAP2P40123 477 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 DGKGP49619 791 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 SCNN1BP51168 640 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 ZNF445P59923 1031 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 TMPRSS15P98073 1019 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 AMPD2Q01433 879 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 ZNF460Q14592 562 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 PPP2R5AQ15172 486 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 SF1Q15637 639 aaKnown RBP3.07□□□□□ -1.92
GABPB1-209ENST00000559100 IGF2-ASQ6U949 168 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 STRA8Q7Z7C7 330 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 MTDHQ86UE4 582 aaKnown RBP3.07□□□□□ -1.92
GABPB1-209ENST00000559100 CCAR1Q8IX12 1150 aaKnown RBP3.07□□□□□ -1.92
GABPB1-209ENST00000559100 CCDC146Q8IYE0 955 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 TMEM145Q8NBT3 493 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 C2CD4AQ8NCU7 369 aaPredicted RBP3.07□□□□□ -1.92
GABPB1-209ENST00000559100 WDR66Q8TBY9 1149 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 RNF141Q8WVD5 230 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 PTPRN2Q92932 1015 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 RCC1LQ96I51 464 aaKnown RBP3.07□□□□□ -1.92
GABPB1-209ENST00000559100 CCDC140Q96MF4 163 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 TTC1Q99614 292 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 PLVAPQ9BX97 442 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 ASPNQ9BXN1 380 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 CEP41Q9BYV8 373 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.07□□□□□ -1.92
GABPB1-209ENST00000559100 AASDHPPTQ9NRN7 309 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 LRRC4BQ9NT99 713 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 SLC5A4Q9NY91 659 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 DIS3Q9Y2L1 958 aaKnown RBP3.07□□□□□ -1.92
GABPB1-209ENST00000559100 FHOD1Q9Y613 1164 aa3.07□□□□□ -1.92
GABPB1-209ENST00000559100 CCDC194A0A1B0GVG4 234 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 B4E1Z4 1266 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 STXBP3O00186 592 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 KCNQ2O43526 872 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 BRINP1O60477 761 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 VAMP4O75379 141 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 PEX14O75381 377 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 ALX3O95076 343 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 TIAF1O95411 115 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 MAP4K4O95819 1239 aaPredicted RBP3.06□□□□□ -1.92
GABPB1-209ENST00000559100 CD3EP07766 207 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 NFICP08651 508 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 POU3F3P20264 500 aaPredicted RBP3.06□□□□□ -1.92
GABPB1-209ENST00000559100 HOXC12P31275 282 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 PREPP48147 710 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 EPHB1P54762 984 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 IL2P60568 153 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 POU4F1Q01851 419 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 GUCY1A3Q02108 690 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 CDK5R2Q13319 367 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 STAT4Q14765 748 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 TTF1Q15361 905 aaPredicted RBP3.06□□□□□ -1.92
GABPB1-209ENST00000559100 PCBP1Q15365 356 aaKnown RBP eCLIP3.06□□□□□ -1.92
GABPB1-209ENST00000559100 CLEC16AQ2KHT3 1053 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 PRSS53Q2L4Q9 553 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 ANKRD39Q53RE8 183 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 PIK3R6Q5UE93 754 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 PKN3Q6P5Z2 889 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 SPOCD1Q6ZMY3 1216 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.06□□□□□ -1.92
GABPB1-209ENST00000559100 MAMDC2Q7Z304 686 aaPredicted RBP3.06□□□□□ -1.92
GABPB1-209ENST00000559100 FGD2Q7Z6J4 655 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 DDX53Q86TM3 631 aaKnown RBP3.06□□□□□ -1.92
GABPB1-209ENST00000559100 ZC3H7AQ8IWR0 971 aaKnown RBP3.06□□□□□ -1.92
GABPB1-209ENST00000559100 RAVER1Q8IY67 606 aaKnown RBP3.06□□□□□ -1.92
GABPB1-209ENST00000559100 ARHGEF39Q8N4T4 335 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 AFAP1L2Q8N4X5 818 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 TOP6BLQ8N6T0 577 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 OR2W6PQ8NHA6 318 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 DNAJB8Q8NHS0 232 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 SLC7A14Q8TBB6 771 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 PI4K2BQ8TCG2 481 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 PPP1R13LQ8WUF5 828 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 FBLIM1Q8WUP2 373 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 WNK4Q96J92 1243 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 MRGPRX3Q96LB0 322 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 PRDM14Q9GZV8 571 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 NKX2-4Q9H2Z4 354 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 KCNF1Q9H3M0 494 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 AKTIPQ9H8T0 292 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 TRIM39Q9HCM9 518 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 PRDM10Q9NQV6 1147 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 KCNH3Q9ULD8 1083 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 THRAP3Q9Y2W1 955 aaKnown RBP3.06□□□□□ -1.92
GABPB1-209ENST00000559100 WASHC2CQ9Y4E1 1318 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 TRAF6Q9Y4K3 522 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 PCDHA9Q9Y5H5 950 aa3.06□□□□□ -1.92
GABPB1-209ENST00000559100 A0A087WZG4 1122 aa3.05□□□□□ -1.92
GABPB1-209ENST00000559100 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.05□□□□□ -1.92
GABPB1-209ENST00000559100 AQP7O14520 342 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms