RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 SART3Q15020 963 aaKnown RBP13.36□□□□□ -0.27
SNX1-204ENST00000559061 MUM1L1Q5H9M0 696 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 SNRNP48Q6IEG0 339 aaKnown RBP13.36□□□□□ -0.27
SNX1-204ENST00000559061 CCDC174Q6PII3 467 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 FBXO46Q6PJ61 603 aaPredicted RBP13.36□□□□□ -0.27
SNX1-204ENST00000559061 PLEKHH3Q7Z736 793 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 CPXCR1Q8N123 301 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 NPLOC4Q8TAT6 608 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 TEX13BQ9BXU2 312 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 FLRT1Q9NZU1 646 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 ISY1Q9ULR0 285 aaKnown RBP13.36□□□□□ -0.27
SNX1-204ENST00000559061 ASTN1O14525 1302 aa13.36□□□□□ -0.27
SNX1-204ENST00000559061 MCM3APO60318 1980 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 ERICH2A1L162 156 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 KLRF2D3W0D1 207 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 GNRH1P01148 92 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 ICAM1P05362 532 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 HMGB1P09429 215 aaKnown RBP13.35□□□□□ -0.27
SNX1-204ENST00000559061 CDC27P30260 824 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 ANAPC15P60006 121 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 TRIM32Q13049 653 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 KIF22Q14807 665 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 CCL14Q16627 93 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 CCDC144CPQ8IYA2 1237 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 CMTR1Q8N1G2 835 aaKnown RBP13.35□□□□□ -0.27
SNX1-204ENST00000559061 SRBD1Q8N5C6 995 aaKnown RBP13.35□□□□□ -0.27
SNX1-204ENST00000559061 CLEC4DQ8WXI8 215 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 BRF1Q92994 677 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 MAP3K14Q99558 947 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
SNX1-204ENST00000559061 RIOX1Q9H6W3 641 aa13.35□□□□□ -0.27
SNX1-204ENST00000559061 FRMPD3Q5JV73 1810 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 DNAJC25-GNG10A0A024R161 153 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 KLF18A0A0U1RQI7 1052 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 OPLAHO14841 1288 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 ZBED4O75132 1171 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 ELNP15502 786 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 RBM25P49756 843 aaKnown RBP13.34□□□□□ -0.27
SNX1-204ENST00000559061 CCNA1P78396 465 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 IKQ13123 557 aaPredicted RBP13.34□□□□□ -0.27
SNX1-204ENST00000559061 IRF5Q13568 498 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 CDC37Q16543 378 aaPredicted RBP13.34□□□□□ -0.27
SNX1-204ENST00000559061 QRICH1Q2TAL8 776 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 CATIPQ7Z7H3 387 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 MICU3Q86XE3 530 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 NCAPG2Q86XI2 1143 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 SH3TC2Q8TF17 1288 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 NUP133Q8WUM0 1156 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 TRIB2Q92519 343 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 MROH8Q9H579 483 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 CNTNAP5Q8WYK1 1306 aa13.34□□□□□ -0.27
SNX1-204ENST00000559061 CCDC69A6NI79 296 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 SLC15A5A6NIM6 579 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 NFIBO00712 420 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 SLC25A27O95847 323 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 PGK2P07205 417 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 HOXC6P09630 235 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 FDX1P10109 184 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 PSMA5P28066 241 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 ADORA2AP29274 412 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 MAP2K5Q13163 448 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 PKN2Q16513 984 aaKnown RBP13.33□□□□□ -0.28
SNX1-204ENST00000559061 NFXL1Q6ZNB6 911 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 TMTC3Q6ZXV5 915 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 TMTC2Q8N394 836 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 FANCBQ8NB91 859 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 COA7Q96BR5 231 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 ARMC5Q96C12 935 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 ABHD8Q96I13 439 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 BACH2Q9BYV9 841 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 HOMER2Q9NSB8 354 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 RNF146Q9NTX7 359 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
SNX1-204ENST00000559061 SLC12A7Q9Y666 1083 aa13.33□□□□□ -0.28
SNX1-204ENST00000559061 LARGE1O95461 756 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 CYP2B6P20813 491 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 PRMT2P55345 433 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 ST3GAL1Q11201 340 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 ZNF792Q3KQV3 632 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 WDR78Q5VTH9 848 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 TNS4Q8IZW8 715 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 ABRAQ8N0Z2 381 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 SOCS4Q8WXH5 440 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 ZNF333Q96JL9 665 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 PURBQ96QR8 312 aaKnown RBP13.32□□□□□ -0.28
SNX1-204ENST00000559061 PIGSQ96S52 555 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 APBA2Q99767 749 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 SPZ1Q9BXG8 430 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 VAT1LQ9HCJ6 419 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 A1CFQ9NQ94 594 aaKnown RBP13.32□□□□□ -0.28
SNX1-204ENST00000559061 CCPG1Q9ULG6 757 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 CYP46A1Q9Y6A2 500 aa13.32□□□□□ -0.28
SNX1-204ENST00000559061 DDX49Q9Y6V7 483 aaKnown RBP13.32□□□□□ -0.28
SNX1-204ENST00000559061 GOLGA8BA8MQT2 603 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 ZBTB43O43298 467 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 ADCY3O60266 1144 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 XRCC5P13010 732 aaKnown RBP13.31□□□□□ -0.28
SNX1-204ENST00000559061 ALAS1P13196 640 aa13.31□□□□□ -0.28
SNX1-204ENST00000559061 PDIA3P30101 505 aaKnown RBP13.31□□□□□ -0.28
SNX1-204ENST00000559061 RCAN1P53805 252 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms