RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 GUCY1B3Q02153 619 aa20.85■□□□□ 0.93
CLPX-203ENST00000558958 TRIM29Q14134 588 aa20.85■□□□□ 0.93
CLPX-203ENST00000558958 FAM177A1Q8N128 213 aaPredicted RBP20.85■□□□□ 0.93
CLPX-203ENST00000558958 HOXC10Q9NYD6 342 aa20.85■□□□□ 0.93
CLPX-203ENST00000558958 ADAMTS5Q9UNA0 930 aa20.85■□□□□ 0.93
CLPX-203ENST00000558958 CCL15-CCL14A0A0B4J2E2 113 aa20.84■□□□□ 0.93
CLPX-203ENST00000558958 FDX1P10109 184 aa20.84■□□□□ 0.93
CLPX-203ENST00000558958 CCL15Q16663 113 aa20.84■□□□□ 0.93
CLPX-203ENST00000558958 TYW1BQ6NUM6 668 aa20.84■□□□□ 0.93
CLPX-203ENST00000558958 BRI3BPQ8WY22 251 aa20.84■□□□□ 0.93
CLPX-203ENST00000558958 ATG4CQ96DT6 458 aa20.84■□□□□ 0.93
CLPX-203ENST00000558958 SLC38A10Q9HBR0 1119 aa20.84■□□□□ 0.93
CLPX-203ENST00000558958 KCNJ14Q9UNX9 436 aa20.84■□□□□ 0.93
CLPX-203ENST00000558958 RLFQ13129 1914 aa20.84■□□□□ 0.93
CLPX-203ENST00000558958 PARP14Q460N5 1801 aa20.83■□□□□ 0.93
CLPX-203ENST00000558958 VWA5AO00534 786 aa20.83■□□□□ 0.93
CLPX-203ENST00000558958 ZSCAN22P10073 491 aaPredicted RBP20.83■□□□□ 0.93
CLPX-203ENST00000558958 APLP1P51693 650 aa20.83■□□□□ 0.93
CLPX-203ENST00000558958 PABPC4Q13310 644 aaKnown RBP eCLIP20.83■□□□□ 0.93
CLPX-203ENST00000558958 CCDC102AQ96A19 550 aa20.83■□□□□ 0.93
CLPX-203ENST00000558958 COA7Q96BR5 231 aa20.83■□□□□ 0.93
CLPX-203ENST00000558958 PHF20Q9BVI0 1012 aa20.83■□□□□ 0.93
CLPX-203ENST00000558958 AMNQ9BXJ7 453 aa20.83■□□□□ 0.93
CLPX-203ENST00000558958 TESPA1A2RU30 521 aaPredicted RBP20.82■□□□□ 0.92
CLPX-203ENST00000558958 SPDYE16A6NNV3 312 aaPredicted RBP20.82■□□□□ 0.92
CLPX-203ENST00000558958 FAM155AB1AL88 458 aaPredicted RBP20.82■□□□□ 0.92
CLPX-203ENST00000558958 MMP1P03956 469 aa20.82■□□□□ 0.92
CLPX-203ENST00000558958 CCDC174Q6PII3 467 aa20.82■□□□□ 0.92
CLPX-203ENST00000558958 FBXO11Q86XK2 927 aa20.82■□□□□ 0.92
CLPX-203ENST00000558958 CCDC148Q8NFR7 591 aa20.82■□□□□ 0.92
CLPX-203ENST00000558958 CCDC12Q8WUD4 166 aaPredicted RBP20.82■□□□□ 0.92
CLPX-203ENST00000558958 ASCC2Q9H1I8 757 aaPredicted RBP20.82■□□□□ 0.92
CLPX-203ENST00000558958 CREBZFQ9NS37 354 aa20.82■□□□□ 0.92
CLPX-203ENST00000558958 PCDHA1Q9Y5I3 950 aa20.82■□□□□ 0.92
CLPX-203ENST00000558958 BTBD19C9JJ37 291 aa20.81■□□□□ 0.92
CLPX-203ENST00000558958 ZBED4O75132 1171 aa20.81■□□□□ 0.92
CLPX-203ENST00000558958 NAPAP54920 295 aa20.81■□□□□ 0.92
CLPX-203ENST00000558958 IRX3P78415 501 aaPredicted RBP20.81■□□□□ 0.92
CLPX-203ENST00000558958 NPY5RQ15761 445 aa20.81■□□□□ 0.92
CLPX-203ENST00000558958 PPP1R18Q6NYC8 613 aa20.81■□□□□ 0.92
CLPX-203ENST00000558958 ANKRD23Q86SG2 305 aa20.81■□□□□ 0.92
CLPX-203ENST00000558958 SLC45A1Q9Y2W3 748 aa20.81■□□□□ 0.92
CLPX-203ENST00000558958 ZNF536O15090 1300 aa20.81■□□□□ 0.92
CLPX-203ENST00000558958 MANSC4A6NHS7 340 aaPredicted RBP20.81■□□□□ 0.92
CLPX-203ENST00000558958 ICAM1P05362 532 aa20.81■□□□□ 0.92
CLPX-203ENST00000558958 OSBPP22059 807 aa20.81■□□□□ 0.92
CLPX-203ENST00000558958 NLRP5P59047 1200 aa20.81■□□□□ 0.92
CLPX-203ENST00000558958 TRAF1Q13077 416 aa20.81■□□□□ 0.92
CLPX-203ENST00000558958 FOXD4L5Q5VV16 416 aaPredicted RBP20.81■□□□□ 0.92
CLPX-203ENST00000558958 REPS2Q8NFH8 660 aa20.81■□□□□ 0.92
CLPX-203ENST00000558958 FOXD4L4Q8WXT5 416 aaPredicted RBP20.81■□□□□ 0.92
CLPX-203ENST00000558958 P2RX7Q99572 595 aaKnown RBP20.81■□□□□ 0.92
CLPX-203ENST00000558958 F13A1P00488 732 aa20.8■□□□□ 0.92
CLPX-203ENST00000558958 CALML3P27482 149 aa20.8■□□□□ 0.92
CLPX-203ENST00000558958 LBX2Q6XYB7 198 aa20.8■□□□□ 0.92
CLPX-203ENST00000558958 PTPN18Q99952 460 aa20.8■□□□□ 0.92
CLPX-203ENST00000558958 ZMYND12Q9H0C1 365 aa20.8■□□□□ 0.92
CLPX-203ENST00000558958 CTDP1Q9Y5B0 961 aaPredicted RBP20.8■□□□□ 0.92
CLPX-203ENST00000558958 ESYT2A0FGR8 921 aa20.79■□□□□ 0.92
CLPX-203ENST00000558958 PDHXO00330 501 aa20.79■□□□□ 0.92
CLPX-203ENST00000558958 OAZ1P54368 228 aa20.79■□□□□ 0.92
CLPX-203ENST00000558958 HERVK_113P62684 666 aa20.79■□□□□ 0.92
CLPX-203ENST00000558958 KIF23Q02241 960 aaPredicted RBP20.79■□□□□ 0.92
CLPX-203ENST00000558958 SAFBQ15424 915 aaKnown RBP eCLIP20.79■□□□□ 0.92
CLPX-203ENST00000558958 USH1GQ495M9 461 aa20.79■□□□□ 0.92
CLPX-203ENST00000558958 MCTP1Q6DN14 999 aa20.79■□□□□ 0.92
CLPX-203ENST00000558958 GALNT17Q6IS24 598 aa20.79■□□□□ 0.92
CLPX-203ENST00000558958 POTEEQ6S8J3 1075 aa20.79■□□□□ 0.92
CLPX-203ENST00000558958 FERMT3Q86UX7 667 aa20.79■□□□□ 0.92
CLPX-203ENST00000558958 AGBL1Q96MI9 1066 aa20.79■□□□□ 0.92
CLPX-203ENST00000558958 PNMA3Q9UL41 463 aa20.79■□□□□ 0.92
CLPX-203ENST00000558958 PNMA2Q9UL42 364 aa20.79■□□□□ 0.92
CLPX-203ENST00000558958 SMCO2A6NFE2 343 aa20.78■□□□□ 0.92
CLPX-203ENST00000558958 RASSF10A6NK89 507 aa20.78■□□□□ 0.92
CLPX-203ENST00000558958 ATP2A1O14983 1001 aa20.78■□□□□ 0.92
CLPX-203ENST00000558958 DIS3L2Q8IYB7 885 aaKnown RBP20.78■□□□□ 0.92
CLPX-203ENST00000558958 CPXCR1Q8N123 301 aa20.78■□□□□ 0.92
CLPX-203ENST00000558958 FAM43AQ8N2R8 423 aa20.78■□□□□ 0.92
CLPX-203ENST00000558958 MB21D1Q8N884 522 aa20.78■□□□□ 0.92
CLPX-203ENST00000558958 DAGLBQ8NCG7 672 aa20.78■□□□□ 0.92
CLPX-203ENST00000558958 RAVER2Q9HCJ3 691 aaKnown RBP20.78■□□□□ 0.92
CLPX-203ENST00000558958 C6orf50Q9HD87 102 aa20.78■□□□□ 0.92
CLPX-203ENST00000558958 CCPG1Q9ULG6 757 aa20.78■□□□□ 0.92
CLPX-203ENST00000558958 PCDHA4Q9UN74 947 aa20.78■□□□□ 0.92
CLPX-203ENST00000558958 BTBD18B2RXH4 712 aa20.77■□□□□ 0.92
CLPX-203ENST00000558958 TAL1P17542 331 aaPredicted RBP20.77■□□□□ 0.92
CLPX-203ENST00000558958 U2AF2P26368 475 aaKnown RBP eCLIP20.77■□□□□ 0.927e-7■■■■■ 28.9
CLPX-203ENST00000558958 GNA11P29992 359 aa20.77■□□□□ 0.92
CLPX-203ENST00000558958 KRT2P35908 639 aa20.77■□□□□ 0.92
CLPX-203ENST00000558958 INHBEP58166 350 aa20.77■□□□□ 0.92
CLPX-203ENST00000558958 RESTQ13127 1097 aa20.77■□□□□ 0.92
CLPX-203ENST00000558958 TMEM132BQ14DG7 1078 aa20.77■□□□□ 0.92
CLPX-203ENST00000558958 DEFB115Q30KQ5 88 aa20.77■□□□□ 0.92
CLPX-203ENST00000558958 OXER1Q8TDS5 423 aa20.77■□□□□ 0.92
CLPX-203ENST00000558958 FOXP1Q9H334 677 aaPredicted RBP20.77■□□□□ 0.92
CLPX-203ENST00000558958 ZSCAN16Q9H4T2 348 aaPredicted RBP20.77■□□□□ 0.92
CLPX-203ENST00000558958 BRMS1Q9HCU9 246 aa20.77■□□□□ 0.92
CLPX-203ENST00000558958 ZNF214Q9UL59 606 aaPredicted RBP20.77■□□□□ 0.92
CLPX-203ENST00000558958 ABCB11O95342 1321 aa20.77■□□□□ 0.92
CLPX-203ENST00000558958 KIF28PB7ZC32 967 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 235.7 ms