RNA–Protein interactions for RNA: ENST00000558925.1

USP3-209, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-209ENST00000558925 GAB4Q2WGN9 574 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 SOGA3Q5TF21 947 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 EGFLAMQ63HQ2 1017 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 TMEM132EQ6IEE7 984 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 C6orf15Q6UXA7 325 aaPredicted RBP2.44□□□□□ -2.02
USP3-209ENST00000558925 LILRB2Q8N423 598 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 PDZD8Q8NEN9 1154 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 SIGLEC10Q96LC7 697 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 RNPC3Q96LT9 517 aaKnown RBP2.44□□□□□ -2.02
USP3-209ENST00000558925 SORCS2Q96PQ0 1159 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 PUS7Q96PZ0 661 aaKnown RBP2.44□□□□□ -2.02
USP3-209ENST00000558925 CRBNQ96SW2 442 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 GPR20Q99678 358 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 DPH2Q9BQC3 489 aaPredicted RBP2.44□□□□□ -2.02
USP3-209ENST00000558925 MENTQ9BUN1 341 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 KRTAP3-1Q9BYR8 98 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 CNTD2Q9H8S5 307 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 EHMT1Q9H9B1 1298 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 SIRPGQ9P1W8 387 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 KLHL3Q9UH77 587 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 PCDHB10Q9UN67 800 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 MSRB2Q9Y3D2 182 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 R3HCC1Q9Y3T6 440 aaKnown RBP2.44□□□□□ -2.02
USP3-209ENST00000558925 SBNO2Q9Y2G9 1366 aa2.44□□□□□ -2.02
USP3-209ENST00000558925 LTBP3Q9NS15 1303 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 MEIS3P2A8K0S8 358 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 CHURC1-FNTBB4DL54 471 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 U2SURPO15042 1029 aaKnown RBP2.43□□□□□ -2.02
USP3-209ENST00000558925 FANCGO15287 622 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 PDPK1O15530 556 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 DIAPH1O60610 1272 aaKnown RBP2.43□□□□□ -2.02
USP3-209ENST00000558925 DDAH1O94760 285 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 PGRP06401 933 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 NME1P15531 152 aaKnown RBP2.43□□□□□ -2.02
USP3-209ENST00000558925 GUCY2CP25092 1073 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 GRK4P32298 578 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 PDE6BP35913 854 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 NFE2L2Q16236 605 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 TNNI3KQ59H18 835 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 ARSHQ5FYA8 562 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 SPATC1Q76KD6 591 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 TMPRSS7Q7RTY8 843 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 HDXQ7Z353 690 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 FRMD5Q7Z6J6 570 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 CREG2Q8IUH2 290 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 RBBP8NLQ8NC74 664 aaPredicted RBP2.43□□□□□ -2.02
USP3-209ENST00000558925 SH3TC2Q8TF17 1288 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 MKL1Q969V6 931 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 ELMO3Q96BJ8 720 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 ACSF2Q96CM8 615 aaPredicted RBP2.43□□□□□ -2.02
USP3-209ENST00000558925 VWCEQ96DN2 955 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 ATG4CQ96DT6 458 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 GPATCH3Q96I76 525 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 Q96M66 194 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 SLC9A7Q96T83 725 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 DNAJC7Q99615 494 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 DUSP15Q9H1R2 295 aaPredicted RBP2.43□□□□□ -2.02
USP3-209ENST00000558925 CWC22Q9HCG8 908 aaKnown RBP2.43□□□□□ -2.02
USP3-209ENST00000558925 LUC7LQ9NQ29 371 aaKnown RBP2.43□□□□□ -2.02
USP3-209ENST00000558925 FAM86C1Q9NVL1 165 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 PFDN2Q9UHV9 154 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 IRAK3Q9Y616 596 aa2.43□□□□□ -2.02
USP3-209ENST00000558925 PRR36Q9H6K5 1346 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 ESYT3A0FGR9 886 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 N4BP3O15049 544 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 PPM1GO15355 546 aaPredicted RBP2.42□□□□□ -2.02
USP3-209ENST00000558925 IMPDH2P12268 514 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 TGM1P22735 817 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 CASP7P55210 303 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 ETF1P62495 437 aaKnown RBP2.42□□□□□ -2.02
USP3-209ENST00000558925 SRSF3P84103 164 aaKnown RBP2.42□□□□□ -2.02
USP3-209ENST00000558925 SQSTM1Q13501 440 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 RASGRF1Q13972 1273 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 NR0B2Q15466 257 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 TDRD10Q5VZ19 366 aaKnown RBP2.42□□□□□ -2.02
USP3-209ENST00000558925 ERICH6BQ5W0A0 696 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 LETMD1Q6P1Q0 360 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 UNC5AQ6ZN44 842 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 PPFIBP1Q86W92 1011 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 FAM129CQ86XR2 697 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 SIRT2Q8IXJ6 389 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 FAM178BQ8IXR5 827 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 SP8Q8IXZ3 490 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 LILRA2Q8N149 483 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 Q8N1X5 172 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 OR6P1Q8NGX9 317 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 LGR4Q9BXB1 951 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 FANCLQ9NW38 375 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 GMIPQ9P107 970 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 TJP2Q9UDY2 1190 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 GPR160Q9UJ42 338 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 SNCAIPQ9Y6H5 919 aa2.42□□□□□ -2.02
USP3-209ENST00000558925 FITM1A5D6W6 292 aa2.41□□□□□ -2.02
USP3-209ENST00000558925 ENPP3O14638 875 aa2.41□□□□□ -2.02
USP3-209ENST00000558925 UBOX5O94941 541 aa2.41□□□□□ -2.02
USP3-209ENST00000558925 HSP90B1P14625 803 aaKnown RBP2.41□□□□□ -2.02
USP3-209ENST00000558925 SDHBP21912 280 aa2.41□□□□□ -2.02
USP3-209ENST00000558925 TPP2P29144 1249 aaPredicted RBP2.41□□□□□ -2.02
USP3-209ENST00000558925 CDR1P51861 262 aa2.41□□□□□ -2.02
USP3-209ENST00000558925 ADAM17P78536 824 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms