RNA–Protein interactions for RNA: ENST00000558903.1

CHRNA3-203, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 4

Gene CHRNA3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-203ENST00000558903 CATSPERGQ6ZRH7 1159 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 MB21D1Q8N884 522 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 GMCL1P1Q8NEA9 526 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 GPRC5AQ8NFJ5 357 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 RAET1EQ8TD07 263 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 DCAF4Q8WV16 495 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 MAP4K1Q92918 833 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 ZSCAN10Q96SZ4 725 aaPredicted RBP6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 KCNK17Q96T54 332 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 NUP88Q99567 741 aaPredicted RBP6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 P2RX7Q99572 595 aaKnown RBP6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 SLF1Q9BQI6 1058 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 LSG1Q9H089 658 aaKnown RBP6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 IL25Q9H293 177 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 UPF2Q9HAU5 1272 aaKnown RBP6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 FAM217BQ9NTX9 383 aaPredicted RBP6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 BIN2Q9UBW5 565 aaPredicted RBP6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 FEM1BQ9UK73 627 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 NAP1L2Q9ULW6 460 aaPredicted RBP6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 SYNPO2Q9UMS6 1093 aa6.84□□□□□ -1.31
CHRNA3-203ENST00000558903 FRMPD3Q5JV73 1810 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 FRMPD2Q68DX3 1309 aaPredicted RBP6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 IGKV6D-41A0A0C4DH26 115 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 CCDC69A6NI79 296 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 TMEM232C9JQI7 657 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 SLC27A2O14975 620 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 MAPK4P31152 587 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 SSTR3P32745 418 aaPredicted RBP6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 MCM5P33992 734 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 COPB2P35606 906 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 PRMT2P55345 433 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 ERVK-9P63128 1117 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 ERVK-24P63145 666 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 SLC9C1Q4G0N8 1177 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 TMEM67Q5HYA8 995 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 FAM160B2Q86V87 743 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 NCAPG2Q86XI2 1143 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 PNMA1Q8ND90 353 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 CHURC1Q8WUH1 139 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 ATG4CQ96DT6 458 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 TTC14Q96N46 770 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 PHOX2BQ99453 314 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 TMEM47Q9BQJ4 181 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 NBPF3Q9H094 633 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 R3HDMLQ9H3Y0 253 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 TCP11L1Q9NUJ3 509 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 RABGAP1Q9Y3P9 1069 aa6.83□□□□□ -1.32
CHRNA3-203ENST00000558903 ADGRA2Q96PE1 1338 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 PRC1O43663 620 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 HMGB1P09429 215 aaKnown RBP6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 FGRP09769 529 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 PARP1P09874 1014 aaKnown RBP6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 BCRP11274 1271 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 PSMA5P28066 241 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 EMP3P54852 163 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 COL13A1Q5TAT6 717 aaPredicted RBP6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 CCDC174Q6PII3 467 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 FBXO46Q6PJ61 603 aaPredicted RBP6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 BLOC1S2Q6QNY1 142 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 C17orf99Q6UX52 265 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 KCTD1Q719H9 257 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 CHST3Q7LGC8 479 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 OTOP1Q7RTM1 612 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 CATIPQ7Z7H3 387 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 NBPF11Q86T75 865 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 DGKHQ86XP1 1220 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 CPXCR1Q8N123 301 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 ENAHQ8N8S7 591 aaPredicted RBP6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 PRPF38AQ8NAV1 312 aaKnown RBP6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 CTCFLQ8NI51 663 aaPredicted RBP6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 NUP133Q8WUM0 1156 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 SOCS4Q8WXH5 440 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 TATDN2Q93075 761 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 MKL1Q969V6 931 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 GMCL1Q96IK5 515 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 TMEM87BQ96K49 555 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 MCOLN1Q9GZU1 580 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 IL17RBQ9NRM6 502 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 SLC5A4Q9NY91 659 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 ZSWIM5Q9P217 1185 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 MORF4L1Q9UBU8 362 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 PPP1R9AQ9ULJ8 1098 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 DOCK3Q8IZD9 2030 aa6.82□□□□□ -1.32
CHRNA3-203ENST00000558903 RCCD1A6NED2 376 aa6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 CCDC85CA6NKD9 419 aa6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 SLC25A27O95847 323 aa6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 CALM1P0DP23 149 aa6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 CALM2P0DP24 149 aa6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 CALM3P0DP25 149 aa6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 FDX1P10109 184 aa6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 UBXN2AP68543 259 aa6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 KCTD2Q14681 263 aa6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 ASPRV1Q53RT3 343 aa6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 VARS2Q5ST30 1063 aaKnown RBP6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 GPATCH4Q5T3I0 446 aaKnown RBP6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 SYDE2Q5VT97 1194 aa6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 SNRNP48Q6IEG0 339 aaKnown RBP6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 RCSD1Q6JBY9 416 aa6.81□□□□□ -1.32
CHRNA3-203ENST00000558903 NUDT18Q6ZVK8 323 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms