RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 NFIBO00712 420 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 SHOXO15266 292 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 TSPAN15O95858 294 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 ESR1P03372 595 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 GDNFP39905 211 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 SNW1Q13573 536 aaKnown RBP6.38□□□□□ -1.39
CASC4-206ENST00000558847 TCEAL1Q15170 157 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 LRRC56Q8IYG6 542 aaPredicted RBP6.38□□□□□ -1.39
CASC4-206ENST00000558847 ZSWIM2Q8NEG5 633 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 UBE2FQ969M7 185 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 CCDC120Q96HB5 630 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 APBA2Q99767 749 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 NSUN3Q9H649 340 aaKnown RBP6.38□□□□□ -1.39
CASC4-206ENST00000558847 TMEM260Q9NX78 707 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 ZSWIM5Q9P217 1185 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 PRKAB1Q9Y478 270 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 KDM2BQ8NHM5 1336 aa6.38□□□□□ -1.39
CASC4-206ENST00000558847 C9IYK1 514 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 PPP1R12AO14974 1030 aaPredicted RBP6.37□□□□□ -1.39
CASC4-206ENST00000558847 RAC2P15153 192 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 CFPP27918 469 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 NBPF9Q3BBW0 867 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 LCE4AQ5TA78 99 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 HEATR6Q6AI08 1181 aaKnown RBP6.37□□□□□ -1.39
CASC4-206ENST00000558847 MRM1Q6IN84 353 aaKnown RBP6.37□□□□□ -1.39
CASC4-206ENST00000558847 C16orf86Q6ZW13 317 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 TMPRSS7Q7RTY8 843 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 TSPYL5Q86VY4 417 aaPredicted RBP6.37□□□□□ -1.39
CASC4-206ENST00000558847 CCDC144CPQ8IYA2 1237 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 ANKRD13AQ8IZ07 590 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 LILRB2Q8N423 598 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 CRACR2BQ8N4Y2 399 aaPredicted RBP6.37□□□□□ -1.39
CASC4-206ENST00000558847 ZCRB1Q8TBF4 217 aaKnown RBP6.37□□□□□ -1.39
CASC4-206ENST00000558847 KLHL6Q8WZ60 621 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 HDAC8Q9BY41 377 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 TRIT1Q9H3H1 467 aaKnown RBP6.37□□□□□ -1.39
CASC4-206ENST00000558847 FANCLQ9NW38 375 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 SLAMF8Q9P0V8 285 aa6.37□□□□□ -1.39
CASC4-206ENST00000558847 SBNO2Q9Y2G9 1366 aa6.36□□□□□ -1.39
CASC4-206ENST00000558847 NMIQ13287 307 aaPredicted RBP6.36□□□□□ -1.39
CASC4-206ENST00000558847 SLC10A6Q3KNW5 377 aa6.36□□□□□ -1.39
CASC4-206ENST00000558847 ANKRD39Q53RE8 183 aa6.36□□□□□ -1.39
CASC4-206ENST00000558847 TMC3Q7Z5M5 1100 aa6.36□□□□□ -1.39
CASC4-206ENST00000558847 FBXO15Q8NCQ5 510 aaPredicted RBP6.36□□□□□ -1.39
CASC4-206ENST00000558847 IPO9Q96P70 1041 aaKnown RBP6.36□□□□□ -1.39
CASC4-206ENST00000558847 ALPK1Q96QP1 1244 aa6.36□□□□□ -1.39
CASC4-206ENST00000558847 FEZ1Q99689 392 aa6.36□□□□□ -1.39
CASC4-206ENST00000558847 SPATA9Q9BWV2 254 aa6.36□□□□□ -1.39
CASC4-206ENST00000558847 KRTAP4-9Q9BYQ8 210 aa6.36□□□□□ -1.39
CASC4-206ENST00000558847 GPATCH2Q9NW75 528 aa6.36□□□□□ -1.39
CASC4-206ENST00000558847 PCDHB10Q9UN67 800 aa6.36□□□□□ -1.39
CASC4-206ENST00000558847 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.36□□□□□ -1.39
CASC4-206ENST00000558847 PPM1BO75688 479 aa6.35□□□□□ -1.39
CASC4-206ENST00000558847 TMEM253P0C7T8 217 aa6.35□□□□□ -1.39
CASC4-206ENST00000558847 IBSPP21815 317 aaPredicted RBP6.35□□□□□ -1.39
CASC4-206ENST00000558847 TPP2P29144 1249 aaPredicted RBP6.35□□□□□ -1.39
CASC4-206ENST00000558847 TCEA2Q15560 299 aa6.35□□□□□ -1.39
CASC4-206ENST00000558847 SV2CQ496J9 727 aa6.35□□□□□ -1.39
CASC4-206ENST00000558847 TDRD10Q5VZ19 366 aaKnown RBP6.35□□□□□ -1.39
CASC4-206ENST00000558847 HAUS7Q99871 368 aa6.35□□□□□ -1.39
CASC4-206ENST00000558847 PRDM14Q9GZV8 571 aa6.35□□□□□ -1.39
CASC4-206ENST00000558847 MKRN2Q9H000 416 aaKnown RBP6.35□□□□□ -1.39
CASC4-206ENST00000558847 C19orf73Q9NVV2 129 aa6.35□□□□□ -1.39
CASC4-206ENST00000558847 PRR13Q9NZ81 148 aa6.35□□□□□ -1.39
CASC4-206ENST00000558847 PFDN2Q9UHV9 154 aa6.35□□□□□ -1.39
CASC4-206ENST00000558847 SIGLEC6O43699 453 aa6.34□□□□□ -1.39
CASC4-206ENST00000558847 C1QTNF9P0C862 333 aa6.34□□□□□ -1.39
CASC4-206ENST00000558847 ZSCAN22P10073 491 aaPredicted RBP6.34□□□□□ -1.39
CASC4-206ENST00000558847 POMZP3Q6PJE2 187 aa6.34□□□□□ -1.39
CASC4-206ENST00000558847 SPATC1Q76KD6 591 aa6.34□□□□□ -1.39
CASC4-206ENST00000558847 ABHD4Q8TB40 342 aa6.34□□□□□ -1.39
CASC4-206ENST00000558847 SYTL5Q8TDW5 730 aaPredicted RBP6.34□□□□□ -1.39
CASC4-206ENST00000558847 BRINP2Q9C0B6 783 aa6.34□□□□□ -1.39
CASC4-206ENST00000558847 DCP1AQ9NPI6 582 aaPredicted RBP6.34□□□□□ -1.39
CASC4-206ENST00000558847 WHRNQ9P202 907 aa6.34□□□□□ -1.39
CASC4-206ENST00000558847 LRP2BPQ9P2M1 347 aa6.34□□□□□ -1.39
CASC4-206ENST00000558847 DUSP13Q9UII6 198 aa6.34□□□□□ -1.39
CASC4-206ENST00000558847 PLAAQ9Y263 795 aa6.34□□□□□ -1.39
CASC4-206ENST00000558847 PTCH2Q9Y6C5 1203 aa6.34□□□□□ -1.39
CASC4-206ENST00000558847 A0A087WZG4 1122 aa6.33□□□□□ -1.4
CASC4-206ENST00000558847 ESYT3A0FGR9 886 aa6.33□□□□□ -1.4
CASC4-206ENST00000558847 NOP56O00567 594 aaKnown RBP6.33□□□□□ -1.4
CASC4-206ENST00000558847 PPM1GO15355 546 aaPredicted RBP6.33□□□□□ -1.4
CASC4-206ENST00000558847 DIAPH1O60610 1272 aaKnown RBP6.33□□□□□ -1.4
CASC4-206ENST00000558847 PRAMEF1O95521 474 aa6.33□□□□□ -1.4
CASC4-206ENST00000558847 TP53P04637 393 aaPredicted RBP6.33□□□□□ -1.4
CASC4-206ENST00000558847 ITGA4P13612 1032 aa6.33□□□□□ -1.4
CASC4-206ENST00000558847 HK2P52789 917 aa6.33□□□□□ -1.4
CASC4-206ENST00000558847 AUHQ13825 339 aaKnown RBP6.33□□□□□ -1.4
CASC4-206ENST00000558847 HSP90AA2PQ14568 343 aaPredicted RBP6.33□□□□□ -1.4
CASC4-206ENST00000558847 AXDND1Q5T1B0 1012 aaPredicted RBP6.33□□□□□ -1.4
CASC4-206ENST00000558847 KIAA0907Q7Z7F0 614 aaPredicted RBP6.33□□□□□ -1.4
CASC4-206ENST00000558847 CREG2Q8IUH2 290 aa6.33□□□□□ -1.4
CASC4-206ENST00000558847 C7orf61Q8IZ16 206 aa6.33□□□□□ -1.4
CASC4-206ENST00000558847 ZBTB38Q8NAP3 1195 aaPredicted RBP6.33□□□□□ -1.4
CASC4-206ENST00000558847 KLHL25Q9H0H3 589 aa6.33□□□□□ -1.4
CASC4-206ENST00000558847 EPB41L4BQ9H329 900 aa6.33□□□□□ -1.4
CASC4-206ENST00000558847 PCDHA11Q9Y5I1 949 aa6.33□□□□□ -1.4
CASC4-206ENST00000558847 CBFA2T2O43439 604 aa6.32□□□□□ -1.4
CASC4-206ENST00000558847 EPHX1P07099 455 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms