RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 MAP4K4O95819 1239 aaPredicted RBP11.86□□□□□ -0.51
SPG11-212ENST00000558790 GNAI3P08754 354 aa11.86□□□□□ -0.51
SPG11-212ENST00000558790 SCTRP47872 440 aa11.86□□□□□ -0.51
SPG11-212ENST00000558790 FAM109BQ6ICB4 259 aaPredicted RBP11.86□□□□□ -0.51
SPG11-212ENST00000558790 DNAJC18Q9H819 358 aa11.86□□□□□ -0.51
SPG11-212ENST00000558790 CYLDQ9NQC7 956 aa11.86□□□□□ -0.51
SPG11-212ENST00000558790 MORF4L1Q9UBU8 362 aa11.86□□□□□ -0.51
SPG11-212ENST00000558790 HERC5Q9UII4 1024 aaKnown RBP11.86□□□□□ -0.51
SPG11-212ENST00000558790 ZNF236Q9UL36 1845 aa11.86□□□□□ -0.51
SPG11-212ENST00000558790 FLT1P17948 1338 aa11.86□□□□□ -0.51
SPG11-212ENST00000558790 LDHCP07864 332 aa11.85□□□□□ -0.51
SPG11-212ENST00000558790 RARSP54136 660 aaKnown RBP11.85□□□□□ -0.51
SPG11-212ENST00000558790 IRX3P78415 501 aaPredicted RBP11.85□□□□□ -0.51
SPG11-212ENST00000558790 JAG1P78504 1218 aa11.85□□□□□ -0.51
SPG11-212ENST00000558790 MAP3K12Q12852 859 aa11.85□□□□□ -0.51
SPG11-212ENST00000558790 GORABQ5T7V8 394 aa11.85□□□□□ -0.51
SPG11-212ENST00000558790 MAP3K21Q5TCX8 1036 aa11.85□□□□□ -0.51
SPG11-212ENST00000558790 MYLIPQ8WY64 445 aa11.85□□□□□ -0.51
SPG11-212ENST00000558790 HPS1Q92902 700 aa11.85□□□□□ -0.51
SPG11-212ENST00000558790 AS3MTQ9HBK9 375 aa11.85□□□□□ -0.51
SPG11-212ENST00000558790 TXNRD2Q9NNW7 524 aa11.85□□□□□ -0.51
SPG11-212ENST00000558790 AATFQ9NY61 560 aaKnown RBP eCLIP11.85□□□□□ -0.51
SPG11-212ENST00000558790 TNNQ9UQP3 1299 aa11.85□□□□□ -0.51
SPG11-212ENST00000558790 CHD9Q3L8U1 2897 aa11.85□□□□□ -0.51
SPG11-212ENST00000558790 PFASO15067 1338 aa11.85□□□□□ -0.51
SPG11-212ENST00000558790 MYH7P12883 1935 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 ZNFX1Q9P2E3 1918 aaKnown RBP11.84□□□□□ -0.51
SPG11-212ENST00000558790 COL11A1P12107 1806 aaPredicted RBP11.84□□□□□ -0.51
SPG11-212ENST00000558790 PNMA6EA0A0J9YXQ4 647 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 GDF11O95390 407 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 CYP2B6P20813 491 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 BACE1P56817 501 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 HERVK_113P62684 666 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 MAP7D1Q3KQU3 841 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 ADGRA1Q86SQ6 560 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 MAPKAPK5Q8IW41 473 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 USP38Q8NB14 1042 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 SOCS4Q8WXH5 440 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 WDR18Q9BV38 432 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 C11orf49Q9H6J7 331 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 LRP2BPQ9P2M1 347 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 PI4KBQ9UBF8 816 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 OGDHLQ9ULD0 1010 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 CACNA1AO00555 2505 aa11.84□□□□□ -0.51
SPG11-212ENST00000558790 BAZ2AQ9UIF9 1905 aaKnown RBP11.84□□□□□ -0.51
SPG11-212ENST00000558790 PLXNA1Q9UIW2 1896 aa11.83□□□□□ -0.52
SPG11-212ENST00000558790 ASNSP08243 561 aa11.83□□□□□ -0.52
SPG11-212ENST00000558790 TRIM27P14373 513 aa11.83□□□□□ -0.52
SPG11-212ENST00000558790 NAA16Q6N069 864 aaPredicted RBP11.83□□□□□ -0.52
SPG11-212ENST00000558790 ARHGAP45Q92619 1136 aa11.83□□□□□ -0.52
SPG11-212ENST00000558790 NOL10Q9BSC4 688 aaKnown RBP11.83□□□□□ -0.52
SPG11-212ENST00000558790 TMOD4Q9NZQ9 345 aa11.83□□□□□ -0.52
SPG11-212ENST00000558790 ZBTB21Q9ULJ3 1066 aa11.83□□□□□ -0.52
SPG11-212ENST00000558790 TCF20Q9UGU0 1960 aaKnown RBP11.83□□□□□ -0.52
SPG11-212ENST00000558790 FAM187AA6NFU0 413 aa11.82□□□□□ -0.52
SPG11-212ENST00000558790 GFRA3O60609 400 aa11.82□□□□□ -0.52
SPG11-212ENST00000558790 GNAI2P04899 355 aa11.82□□□□□ -0.52
SPG11-212ENST00000558790 UQCRFS1P1P0C7P4 283 aa11.82□□□□□ -0.52
SPG11-212ENST00000558790 HOXA7P31268 230 aaPredicted RBP11.82□□□□□ -0.52
SPG11-212ENST00000558790 DHX9Q08211 1270 aaKnown RBP11.82□□□□□ -0.52
SPG11-212ENST00000558790 EML3Q32P44 896 aa11.82□□□□□ -0.52
SPG11-212ENST00000558790 PLEKHM2Q8IWE5 1019 aa11.82□□□□□ -0.52
SPG11-212ENST00000558790 GPRC5AQ8NFJ5 357 aa11.82□□□□□ -0.52
SPG11-212ENST00000558790 TGFBRAP1Q8WUH2 860 aa11.82□□□□□ -0.52
SPG11-212ENST00000558790 ITPKCQ96DU7 683 aa11.82□□□□□ -0.52
SPG11-212ENST00000558790 P2RX7Q99572 595 aaKnown RBP11.82□□□□□ -0.52
SPG11-212ENST00000558790 PORCNQ9H237 461 aa11.82□□□□□ -0.52
SPG11-212ENST00000558790 DHX36Q9H2U1 1008 aaKnown RBP11.82□□□□□ -0.52
SPG11-212ENST00000558790 ZFAND3Q9H8U3 227 aa11.82□□□□□ -0.52
SPG11-212ENST00000558790 PALD1Q9ULE6 856 aa11.82□□□□□ -0.52
SPG11-212ENST00000558790 WDFY4Q6ZS81 3184 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 USP17L10C9JJH3 530 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 ZIC2O95409 532 aaPredicted RBP11.81□□□□□ -0.52
SPG11-212ENST00000558790 BAG3O95817 575 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 XRCC5P13010 732 aaKnown RBP11.81□□□□□ -0.52
SPG11-212ENST00000558790 ZKSCAN1P17029 563 aaPredicted RBP11.81□□□□□ -0.52
SPG11-212ENST00000558790 CCND3P30281 292 aaPredicted RBP11.81□□□□□ -0.52
SPG11-212ENST00000558790 ERVK-9P63128 1117 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 ERVK-24P63145 666 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 G3BP1Q13283 466 aaKnown RBP eCLIP11.81□□□□□ -0.52
SPG11-212ENST00000558790 PDE3AQ14432 1141 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 CCL14Q16627 93 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 TTC39AQ5SRH9 613 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 METTL16Q86W50 562 aaKnown RBP11.81□□□□□ -0.52
SPG11-212ENST00000558790 CRACR2BQ8N4Y2 399 aaPredicted RBP11.81□□□□□ -0.52
SPG11-212ENST00000558790 APBA2Q99767 749 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 DBNDD2Q9BQY9 259 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 PAGR1Q9BTK6 254 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 TTYH1Q9H313 450 aaPredicted RBP11.81□□□□□ -0.52
SPG11-212ENST00000558790 SEMA6BQ9H3T3 888 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 RBPJLQ9UBG7 517 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 SAP30BPQ9UHR5 308 aaKnown RBP11.81□□□□□ -0.52
SPG11-212ENST00000558790 MUC6Q6W4X9 2439 aa11.81□□□□□ -0.52
SPG11-212ENST00000558790 C19orf81C9J6K1 198 aa11.8□□□□□ -0.52
SPG11-212ENST00000558790 CYP2E1P05181 493 aaPredicted RBP11.8□□□□□ -0.52
SPG11-212ENST00000558790 COL6A1P12109 1028 aa11.8□□□□□ -0.52
SPG11-212ENST00000558790 MAPK4P31152 587 aa11.8□□□□□ -0.52
SPG11-212ENST00000558790 WDR4P57081 412 aaKnown RBP11.8□□□□□ -0.52
SPG11-212ENST00000558790 CACNB2Q08289 660 aaPredicted RBP11.8□□□□□ -0.52
SPG11-212ENST00000558790 TNNI3KQ59H18 835 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms