RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 IGHA2P01877 340 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 TSPY3P0CV98 308 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 TSPY8P0CW00 308 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 STAT3P40763 770 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 PPARAQ07869 468 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 AAMPQ13685 434 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 TSR1Q2NL82 804 aaKnown RBP9.58□□□□□ -0.88
TRAF3-205ENST00000558700 PPP4R3BQ5MIZ7 849 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 METTL3Q86U44 580 aaKnown RBP9.58□□□□□ -0.88
TRAF3-205ENST00000558700 IFNL3Q8IZI9 196 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 ZNF444Q8N0Y2 327 aaPredicted RBP9.58□□□□□ -0.88
TRAF3-205ENST00000558700 GMCL1P1Q8NEA9 526 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 CEP95Q96GE4 821 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 MAML3Q96JK9 1138 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 CRBNQ96SW2 442 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 PHOX2BQ99453 314 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 NUP88Q99567 741 aaPredicted RBP9.58□□□□□ -0.88
TRAF3-205ENST00000558700 GDF15Q99988 308 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 NRBP1Q9UHY1 535 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 ZNF214Q9UL59 606 aaPredicted RBP9.58□□□□□ -0.88
TRAF3-205ENST00000558700 ADAMTS5Q9UNA0 930 aa9.58□□□□□ -0.88
TRAF3-205ENST00000558700 CTDP1Q9Y5B0 961 aaPredicted RBP9.58□□□□□ -0.88
TRAF3-205ENST00000558700 LRRC37A2A6NM11 1700 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 LAMA4Q16363 1823 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 PATL2C9JE40 543 aaKnown RBP9.57□□□□□ -0.88
TRAF3-205ENST00000558700 F5H6K3 240 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 PRDM1O75626 825 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 SYN1P17600 705 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 BMP8BP34820 402 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 KLRC3Q07444 240 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 HDAC1Q13547 482 aaPredicted RBP9.57□□□□□ -0.88
TRAF3-205ENST00000558700 LRRC26Q2I0M4 334 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 ANKRD45Q5TZF3 282 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 SNRNP48Q6IEG0 339 aaKnown RBP9.57□□□□□ -0.88
TRAF3-205ENST00000558700 LRRC47Q8N1G4 583 aaKnown RBP9.57□□□□□ -0.88
TRAF3-205ENST00000558700 ARRDC4Q8NCT1 418 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 TRPV1Q8NER1 839 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 REPS2Q8NFH8 660 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 SLC39A7Q92504 469 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 EVI5LQ96CN4 794 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 DCBLD2Q96PD2 775 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 SEC62Q99442 399 aaKnown RBP9.57□□□□□ -0.88
TRAF3-205ENST00000558700 MTMR4Q9NYA4 1195 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 STAP2Q9UGK3 403 aa9.57□□□□□ -0.88
TRAF3-205ENST00000558700 DIS3Q9Y2L1 958 aaKnown RBP9.57□□□□□ -0.88
TRAF3-205ENST00000558700 ATP2A1O14983 1001 aa9.56□□□□□ -0.88
TRAF3-205ENST00000558700 MAGEA10P43363 369 aaPredicted RBP9.56□□□□□ -0.88
TRAF3-205ENST00000558700 PRPF38AQ8NAV1 312 aaKnown RBP9.56□□□□□ -0.88
TRAF3-205ENST00000558700 NEDD1Q8NHV4 660 aa9.56□□□□□ -0.88
TRAF3-205ENST00000558700 SENP6Q9GZR1 1112 aaPredicted RBP9.56□□□□□ -0.88
TRAF3-205ENST00000558700 CLIP2Q9UDT6 1046 aa9.56□□□□□ -0.88
TRAF3-205ENST00000558700 FBXO40Q9UH90 709 aa9.56□□□□□ -0.88
TRAF3-205ENST00000558700 FEM1BQ9UK73 627 aa9.56□□□□□ -0.88
TRAF3-205ENST00000558700 ISY1Q9ULR0 285 aaKnown RBP9.56□□□□□ -0.88
TRAF3-205ENST00000558700 ZMYM6O95789 1325 aa9.56□□□□□ -0.88
TRAF3-205ENST00000558700 TSPY2A6NKD2 308 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 ZBED4O75132 1171 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 PGK2P07205 417 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 FDX1P10109 184 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 RARBP10826 455 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 CLK2P49760 499 aaKnown RBP9.55□□□□□ -0.88
TRAF3-205ENST00000558700 OAZ1P54368 228 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 PDE1AP54750 535 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 ZNF792Q3KQV3 632 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 FAM47AQ5JRC9 791 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 SLFN13Q68D06 897 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 TICAM2Q86XR7 235 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 TDHQ8IZJ6 230 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 MSL3Q8N5Y2 521 aaKnown RBP9.55□□□□□ -0.88
TRAF3-205ENST00000558700 MKL1Q969V6 931 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 KIFC2Q96AC6 838 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 GMCL1Q96IK5 515 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 YTHDC1Q96MU7 727 aaKnown RBP9.55□□□□□ -0.88
TRAF3-205ENST00000558700 TINF2Q9BSI4 451 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 UBE2OQ9C0C9 1292 aaKnown RBP9.55□□□□□ -0.88
TRAF3-205ENST00000558700 XPNPEP3Q9NQH7 507 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 PRKAG2Q9UGJ0 569 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 CNPY2Q9Y2B0 182 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.55□□□□□ -0.88
TRAF3-205ENST00000558700 SYNGAP1Q96PV0 1343 aa9.55□□□□□ -0.88
TRAF3-205ENST00000558700 MCM3APO60318 1980 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 BMP3P12645 472 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 AKR1A1P14550 325 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 SLC1A4P43007 532 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 STAT2P52630 851 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 RTP1P59025 263 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 TFAP4Q01664 338 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 IKQ13123 557 aaPredicted RBP9.54□□□□□ -0.88
TRAF3-205ENST00000558700 GJC2Q5T442 439 aaPredicted RBP9.54□□□□□ -0.88
TRAF3-205ENST00000558700 MYSM1Q5VVJ2 828 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 ANO1Q5XXA6 986 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 CCDC129Q6ZRS4 1044 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 FAM160B2Q86V87 743 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 CPXCR1Q8N123 301 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 BANK1Q8NDB2 785 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 DDX11Q96FC9 970 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 LBHD1Q9BQE6 289 aaPredicted RBP9.54□□□□□ -0.88
TRAF3-205ENST00000558700 SLC38A10Q9HBR0 1119 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 HELLSQ9NRZ9 838 aa9.54□□□□□ -0.88
TRAF3-205ENST00000558700 STX8Q9UNK0 236 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms