RNA–Protein interactions for RNA: ENST00000558645.5

CCDC33-204, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-204ENST00000558645 SMCR8Q8TEV9 937 aaPredicted RBP13.69□□□□□ -0.22
CCDC33-204ENST00000558645 DDX11Q96FC9 970 aa13.69□□□□□ -0.22
CCDC33-204ENST00000558645 PARK7Q99497 189 aaKnown RBP13.69□□□□□ -0.22
CCDC33-204ENST00000558645 SLC26A6Q9BXS9 759 aa13.69□□□□□ -0.22
CCDC33-204ENST00000558645 RIOX1Q9H6W3 641 aa13.69□□□□□ -0.22
CCDC33-204ENST00000558645 RAVER2Q9HCJ3 691 aaKnown RBP13.69□□□□□ -0.22
CCDC33-204ENST00000558645 SH2B1Q9NRF2 756 aaPredicted RBP13.69□□□□□ -0.22
CCDC33-204ENST00000558645 BTBD7Q9P203 1132 aa13.69□□□□□ -0.22
CCDC33-204ENST00000558645 CPA4Q9UI42 421 aa13.69□□□□□ -0.22
CCDC33-204ENST00000558645 PNMA3Q9UL41 463 aa13.69□□□□□ -0.22
CCDC33-204ENST00000558645 SLC45A1Q9Y2W3 748 aa13.69□□□□□ -0.22
CCDC33-204ENST00000558645 MYH15Q9Y2K3 1946 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 CCDC196A0A1B0GTZ2 297 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 PLA2G6O60733 806 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 PPP1R11O60927 126 aaPredicted RBP13.68□□□□□ -0.22
CCDC33-204ENST00000558645 TRPA1O75762 1119 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 TBC1D8O95759 1140 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 GNAQP50148 359 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 FOSBP53539 338 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 PLS1Q14651 629 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 QRICH1Q2TAL8 776 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 OTUD7BQ6GQQ9 843 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 CPXCR1Q8N123 301 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 SPRYD3Q8NCJ5 442 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 NSUN7Q8NE18 718 aaKnown RBP13.68□□□□□ -0.22
CCDC33-204ENST00000558645 REPS2Q8NFH8 660 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 AGBL1Q96MI9 1066 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 AIFM3Q96NN9 605 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 SPZ1Q9BXG8 430 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 RANBP17Q9H2T7 1088 aaKnown RBP13.68□□□□□ -0.22
CCDC33-204ENST00000558645 RBPJLQ9UBG7 517 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 ADAMTS5Q9UNA0 930 aa13.68□□□□□ -0.22
CCDC33-204ENST00000558645 RBM19Q9Y4C8 960 aaKnown RBP13.68□□□□□ -0.22
CCDC33-204ENST00000558645 V9GY48 417 aaPredicted RBP13.68□□□□□ -0.22
CCDC33-204ENST00000558645 ZNF536O15090 1300 aa13.67□□□□□ -0.22
CCDC33-204ENST00000558645 KIAA1217Q5T5P2 1943 aa13.67□□□□□ -0.22
CCDC33-204ENST00000558645 PTPDC1A2A3K4 754 aa13.67□□□□□ -0.22
CCDC33-204ENST00000558645 ZBED4O75132 1171 aa13.67□□□□□ -0.22
CCDC33-204ENST00000558645 CAPN15O75808 1086 aa13.67□□□□□ -0.22
CCDC33-204ENST00000558645 IFNAR1P17181 557 aa13.67□□□□□ -0.22
CCDC33-204ENST00000558645 TMEM132BQ14DG7 1078 aa13.67□□□□□ -0.22
CCDC33-204ENST00000558645 Q3C1V9 767 aa13.67□□□□□ -0.22
CCDC33-204ENST00000558645 USH1GQ495M9 461 aa13.67□□□□□ -0.22
CCDC33-204ENST00000558645 GPKOWQ92917 476 aaPredicted RBP eCLIP13.67□□□□□ -0.22
CCDC33-204ENST00000558645 MTMR8Q96EF0 704 aa13.67□□□□□ -0.22
CCDC33-204ENST00000558645 LZTS2Q9BRK4 669 aa13.67□□□□□ -0.22
CCDC33-204ENST00000558645 SLC38A10Q9HBR0 1119 aa13.67□□□□□ -0.22
CCDC33-204ENST00000558645 HOXC10Q9NYD6 342 aa13.67□□□□□ -0.22
CCDC33-204ENST00000558645 CTDP1Q9Y5B0 961 aaPredicted RBP13.67□□□□□ -0.22
CCDC33-204ENST00000558645 MYPNQ86TC9 1320 aa13.66□□□□□ -0.22
CCDC33-204ENST00000558645 FMNL1O95466 1100 aaPredicted RBP13.66□□□□□ -0.22
CCDC33-204ENST00000558645 FDPSP14324 419 aaKnown RBP13.66□□□□□ -0.22
CCDC33-204ENST00000558645 SSRP1Q08945 709 aaKnown RBP13.66□□□□□ -0.22
CCDC33-204ENST00000558645 PPP2R5BQ15173 497 aa13.66□□□□□ -0.22
CCDC33-204ENST00000558645 LBX2Q6XYB7 198 aa13.66□□□□□ -0.22
CCDC33-204ENST00000558645 COA7Q96BR5 231 aa13.66□□□□□ -0.22
CCDC33-204ENST00000558645 RRP36Q96EU6 259 aaKnown RBP13.66□□□□□ -0.22
CCDC33-204ENST00000558645 ABHD8Q96I13 439 aa13.66□□□□□ -0.22
CCDC33-204ENST00000558645 ZFYVE28Q9HCC9 887 aa13.66□□□□□ -0.22
CCDC33-204ENST00000558645 ZCCHC17Q9NP64 241 aaKnown RBP13.66□□□□□ -0.22
CCDC33-204ENST00000558645 HOMER2Q9NSB8 354 aa13.66□□□□□ -0.22
CCDC33-204ENST00000558645 RIPK3Q9Y572 518 aa13.66□□□□□ -0.22
CCDC33-204ENST00000558645 ZBTB5O15062 677 aa13.65□□□□□ -0.22
CCDC33-204ENST00000558645 PRPF3O43395 683 aaKnown RBP13.65□□□□□ -0.22
CCDC33-204ENST00000558645 TLR2O60603 784 aa13.65□□□□□ -0.22
CCDC33-204ENST00000558645 SMARCA1P28370 1054 aa13.65□□□□□ -0.22
CCDC33-204ENST00000558645 ERVK-9P63128 1117 aa13.65□□□□□ -0.22
CCDC33-204ENST00000558645 ERVK-24P63145 666 aa13.65□□□□□ -0.22
CCDC33-204ENST00000558645 CUL4AQ13619 759 aa13.65□□□□□ -0.22
CCDC33-204ENST00000558645 PKN1Q16512 942 aa13.65□□□□□ -0.22
CCDC33-204ENST00000558645 NOM1Q5C9Z4 860 aaKnown RBP13.65□□□□□ -0.22
CCDC33-204ENST00000558645 SNRNP48Q6IEG0 339 aaKnown RBP13.65□□□□□ -0.22
CCDC33-204ENST00000558645 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
CCDC33-204ENST00000558645 SHISA4Q96DD7 197 aa13.65□□□□□ -0.22
CCDC33-204ENST00000558645 CFHR5Q9BXR6 569 aa13.65□□□□□ -0.22
CCDC33-204ENST00000558645 ORC3Q9UBD5 711 aaPredicted RBP13.65□□□□□ -0.22
CCDC33-204ENST00000558645 SEC63Q9UGP8 760 aaKnown RBP13.65□□□□□ -0.22
CCDC33-204ENST00000558645 ZNF214Q9UL59 606 aaPredicted RBP13.65□□□□□ -0.22
CCDC33-204ENST00000558645 CCPG1Q9ULG6 757 aa13.65□□□□□ -0.22
CCDC33-204ENST00000558645 TCHHQ07283 1943 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 PNMA6FA0A0J9YX94 578 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 ALDH1A1P00352 501 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 ICAM1P05362 532 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 BCRP11274 1271 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 ALAS1P13196 640 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 AKAP17AQ02040 695 aaKnown RBP13.64□□□□□ -0.23
CCDC33-204ENST00000558645 MUM1L1Q5H9M0 696 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 WWC2Q6AWC2 1192 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 TYW1BQ6NUM6 668 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 CPLX2Q6PUV4 134 aaKnown RBP13.64□□□□□ -0.23
CCDC33-204ENST00000558645 C17orf99Q6UX52 265 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 HEATR3Q7Z4Q2 680 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 FBXO11Q86XK2 927 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 SMARCC2Q8TAQ2 1214 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 MOV10L1Q9BXT6 1211 aaKnown RBP13.64□□□□□ -0.23
CCDC33-204ENST00000558645 RNF26Q9BY78 433 aaPredicted RBP13.64□□□□□ -0.23
CCDC33-204ENST00000558645 SPATC1LQ9H0A9 340 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 PORCNQ9H237 461 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 GJB4Q9NTQ9 266 aa13.64□□□□□ -0.23
CCDC33-204ENST00000558645 RABGAP1Q9Y3P9 1069 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms