RNA–Protein interactions for RNA: ENST00000558534.5

RABGGTA-205, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-205ENST00000558534 RNF208Q9H0X6 261 aa18.43■□□□□ 0.54
RABGGTA-205ENST00000558534 KIAA0100Q14667 2235 aaKnown RBP18.43■□□□□ 0.54
RABGGTA-205ENST00000558534 FRMPD2Q68DX3 1309 aaPredicted RBP18.43■□□□□ 0.54
RABGGTA-205ENST00000558534 CCDC69A6NI79 296 aa18.42■□□□□ 0.54
RABGGTA-205ENST00000558534 DDAH1O94760 285 aa18.42■□□□□ 0.54
RABGGTA-205ENST00000558534 GJB1P08034 283 aa18.42■□□□□ 0.54
RABGGTA-205ENST00000558534 CCL5P13501 91 aa18.42■□□□□ 0.54
RABGGTA-205ENST00000558534 PSMA5P28066 241 aa18.42■□□□□ 0.54
RABGGTA-205ENST00000558534 KIF5BP33176 963 aa18.42■□□□□ 0.54
RABGGTA-205ENST00000558534 RGS19P49795 217 aa18.42■□□□□ 0.54
RABGGTA-205ENST00000558534 SOX10P56693 466 aa18.42■□□□□ 0.54
RABGGTA-205ENST00000558534 SYNE3Q6ZMZ3 975 aa18.42■□□□□ 0.54
RABGGTA-205ENST00000558534 NFXL1Q6ZNB6 911 aa18.42■□□□□ 0.54
RABGGTA-205ENST00000558534 STOX1Q6ZVD7 989 aa18.42■□□□□ 0.54
RABGGTA-205ENST00000558534 NRBP1Q9UHY1 535 aa18.42■□□□□ 0.54
RABGGTA-205ENST00000558534 CCPG1Q9ULG6 757 aa18.42■□□□□ 0.54
RABGGTA-205ENST00000558534 CENPFP49454 3210 aa18.41■□□□□ 0.54
RABGGTA-205ENST00000558534 DHX16O60231 1041 aaKnown RBP18.41■□□□□ 0.54
RABGGTA-205ENST00000558534 MSCO60682 206 aa18.41■□□□□ 0.54
RABGGTA-205ENST00000558534 LIFRP42702 1097 aa18.41■□□□□ 0.54
RABGGTA-205ENST00000558534 SLC4A3P48751 1232 aa18.41■□□□□ 0.54
RABGGTA-205ENST00000558534 CTCFLQ8NI51 663 aaPredicted RBP18.41■□□□□ 0.54
RABGGTA-205ENST00000558534 TRIB2Q92519 343 aa18.41■□□□□ 0.54
RABGGTA-205ENST00000558534 ALAS1P13196 640 aa18.4■□□□□ 0.54
RABGGTA-205ENST00000558534 HSPA4P34932 840 aa18.4■□□□□ 0.54
RABGGTA-205ENST00000558534 GNAQP50148 359 aa18.4■□□□□ 0.54
RABGGTA-205ENST00000558534 CCDC174Q6PII3 467 aa18.4■□□□□ 0.54
RABGGTA-205ENST00000558534 IGDCC4Q8TDY8 1250 aa18.4■□□□□ 0.54
RABGGTA-205ENST00000558534 TRERF1Q96PN7 1200 aa18.4■□□□□ 0.54
RABGGTA-205ENST00000558534 MPHOSPH6Q99547 160 aaKnown RBP18.4■□□□□ 0.54
RABGGTA-205ENST00000558534 LZTS2Q9BRK4 669 aa18.4■□□□□ 0.54
RABGGTA-205ENST00000558534 RNF146Q9NTX7 359 aa18.4■□□□□ 0.54
RABGGTA-205ENST00000558534 PRKAR2AP13861 404 aaKnown RBP18.39■□□□□ 0.53
RABGGTA-205ENST00000558534 SLC16A2P36021 539 aa18.39■□□□□ 0.53
RABGGTA-205ENST00000558534 GJA8P48165 433 aa18.39■□□□□ 0.53
RABGGTA-205ENST00000558534 FGD1P98174 961 aa18.39■□□□□ 0.53
RABGGTA-205ENST00000558534 MAP3K21Q5TCX8 1036 aa18.39■□□□□ 0.53
RABGGTA-205ENST00000558534 TTBK2Q6IQ55 1244 aa18.39■□□□□ 0.53
RABGGTA-205ENST00000558534 DHX32Q7L7V1 743 aaKnown RBP18.39■□□□□ 0.53
RABGGTA-205ENST00000558534 ZNF467Q7Z7K2 595 aaPredicted RBP18.39■□□□□ 0.53
RABGGTA-205ENST00000558534 CHMP4CQ96CF2 233 aa18.39■□□□□ 0.53
RABGGTA-205ENST00000558534 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.39■□□□□ 0.53
RABGGTA-205ENST00000558534 B4DLN1 442 aa18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 KLRF2D3W0D1 207 aa18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 SH2B2O14492 632 aaPredicted RBP18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 GOLGA8HP0CJ92 632 aa18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 MRPL12P52815 198 aaKnown RBP18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 MLLT1Q03111 559 aaPredicted RBP18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 GRM4Q14833 912 aa18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 MTFR1Q15390 333 aa18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 KCNB2Q92953 911 aa18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 MAML3Q96JK9 1138 aa18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 LY9Q9HBG7 655 aa18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 PAK6Q9NQU5 681 aaPredicted RBP18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 HOMER2Q9NSB8 354 aa18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 SLC12A7Q9Y666 1083 aa18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 ZNF536O15090 1300 aa18.38■□□□□ 0.53
RABGGTA-205ENST00000558534 LOC102724159A0A0B4J2E5 919 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 MYCP01106 439 aaPredicted RBP18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 SMARCA1P28370 1054 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 ANTXR2P58335 489 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 PWP2Q15269 919 aaKnown RBP18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 ZNF792Q3KQV3 632 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 BLOC1S2Q6QNY1 142 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 CHST3Q7LGC8 479 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 SGMS1Q86VZ5 419 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 ADGRF4Q8IZF3 695 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 ZNF654Q8IZM8 581 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 ANKLE1Q8NAG6 615 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 NPLOC4Q8TAT6 608 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 AGBL1Q96MI9 1066 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 UNC93B1Q9H1C4 597 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 ADD3Q9UEY8 706 aaKnown RBP18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 CNPY2Q9Y2B0 182 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 RIPK3Q9Y572 518 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 TAF6LQ9Y6J9 622 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 ABCB11O95342 1321 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 SYNGAP1Q96PV0 1343 aa18.37■□□□□ 0.53
RABGGTA-205ENST00000558534 PALM3A6NDB9 673 aaPredicted RBP18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 POTEB2H3BUK9 544 aa18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 COBLO75128 1261 aa18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 SGPL1O95470 568 aa18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 RCAN1P53805 252 aa18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 CACNB2Q08289 660 aaPredicted RBP18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 TROAPQ12815 778 aa18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 PPP2R5BQ15173 497 aa18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 CDC37Q16543 378 aaPredicted RBP18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 RASGRP2Q7LDG7 609 aa18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 MCF2L2Q86YR7 1114 aa18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 U2AF1L4Q8WU68 220 aaKnown RBP18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 NUP133Q8WUM0 1156 aa18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 TINF2Q9BSI4 451 aa18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 MAD2L2Q9UI95 211 aa18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 MRPL11Q9Y3B7 192 aaKnown RBP18.36■□□□□ 0.53
RABGGTA-205ENST00000558534 DNAJC25-GNG10A0A024R161 153 aa18.35■□□□□ 0.53
RABGGTA-205ENST00000558534 ASB14A6NK59 587 aa18.35■□□□□ 0.53
RABGGTA-205ENST00000558534 CCL14Q16627 93 aa18.35■□□□□ 0.53
RABGGTA-205ENST00000558534 FBXO11Q86XK2 927 aa18.35■□□□□ 0.53
RABGGTA-205ENST00000558534 SAMD3Q8N6K7 520 aa18.35■□□□□ 0.53
RABGGTA-205ENST00000558534 RGS22Q8NE09 1264 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms