RNA–Protein interactions for RNA: ENST00000558321.5

CDC42BPB-202, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 528 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-202ENST00000558321 RUFY2Q8WXA3 655 aa14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 TRERF1Q96PN7 1200 aa14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 ACAD9Q9H845 621 aa14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 XPNPEP3Q9NQH7 507 aa14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 RNF146Q9NTX7 359 aa14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 COL11A1P12107 1806 aaPredicted RBP14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 PARP14Q460N5 1801 aa14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 FRMPD2Q68DX3 1309 aaPredicted RBP14.56□□□□□ -0.08
CDC42BPB-202ENST00000558321 POTEB2H3BUK9 544 aa14.55□□□□□ -0.08
CDC42BPB-202ENST00000558321 CCDC178Q5BJE1 867 aa14.55□□□□□ -0.08
CDC42BPB-202ENST00000558321 RASGRP2Q7LDG7 609 aa14.55□□□□□ -0.08
CDC42BPB-202ENST00000558321 IQCA1Q86XH1 822 aa14.55□□□□□ -0.08
CDC42BPB-202ENST00000558321 ZKSCAN3Q9BRR0 538 aa14.55□□□□□ -0.08
CDC42BPB-202ENST00000558321 FAM184BQ9ULE4 1060 aa14.55□□□□□ -0.08
CDC42BPB-202ENST00000558321 CCPG1Q9ULG6 757 aa14.55□□□□□ -0.08
CDC42BPB-202ENST00000558321 CEP290O15078 2479 aa14.55□□□□□ -0.08
CDC42BPB-202ENST00000558321 KDM4AO75164 1064 aa14.54□□□□□ -0.08
CDC42BPB-202ENST00000558321 AKR1A1P14550 325 aa14.54□□□□□ -0.08
CDC42BPB-202ENST00000558321 GSPT1P15170 499 aaKnown RBP14.54□□□□□ -0.08
CDC42BPB-202ENST00000558321 NT5C2P49902 561 aa14.54□□□□□ -0.08
CDC42BPB-202ENST00000558321 LRRC41Q15345 812 aa14.54□□□□□ -0.08
CDC42BPB-202ENST00000558321 SYDE2Q5VT97 1194 aa14.54□□□□□ -0.08
CDC42BPB-202ENST00000558321 ZNF467Q7Z7K2 595 aaPredicted RBP14.54□□□□□ -0.08
CDC42BPB-202ENST00000558321 RNF180Q86T96 592 aa14.54□□□□□ -0.08
CDC42BPB-202ENST00000558321 ZHX1Q9UKY1 873 aaPredicted RBP14.54□□□□□ -0.08
CDC42BPB-202ENST00000558321 ZNF536O15090 1300 aa14.54□□□□□ -0.08
CDC42BPB-202ENST00000558321 NEDD4P46934 1319 aa14.54□□□□□ -0.08
CDC42BPB-202ENST00000558321 SYNGAP1Q96PV0 1343 aa14.54□□□□□ -0.08
CDC42BPB-202ENST00000558321 B4E1Z4 1266 aa14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 SNAI1O95863 264 aaPredicted RBP14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 PGK1P00558 417 aa14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 ZNF865P0CJ78 1059 aaPredicted RBP14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 PDHBP11177 359 aa14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 ADCYAP1R1P41586 468 aa14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 CNTN2Q02246 1040 aa14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 MAMDC4Q6UXC1 1216 aa14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 BTNL9Q6UXG8 535 aa14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 DGKHQ86XP1 1220 aa14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 FERMT2Q96AC1 680 aa14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 KRT23Q9C075 422 aa14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 KAT14Q9H8E8 782 aa14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 CNNM2Q9H8M5 875 aa14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 ZNFX1Q9P2E3 1918 aaKnown RBP14.53□□□□□ -0.08
CDC42BPB-202ENST00000558321 ICAM1P05362 532 aa14.52□□□□□ -0.09
CDC42BPB-202ENST00000558321 CHMLP26374 656 aa14.52□□□□□ -0.09
CDC42BPB-202ENST00000558321 FXR1P51114 621 aaKnown RBP eCLIP14.52□□□□□ -0.09
CDC42BPB-202ENST00000558321 ACVR2BQ13705 512 aa14.52□□□□□ -0.09
CDC42BPB-202ENST00000558321 NSMFQ6X4W1 530 aa14.52□□□□□ -0.09
CDC42BPB-202ENST00000558321 SLC39A5Q6ZMH5 540 aa14.52□□□□□ -0.09
CDC42BPB-202ENST00000558321 ZSCAN10Q96SZ4 725 aaPredicted RBP14.52□□□□□ -0.09
CDC42BPB-202ENST00000558321 RANBP17Q9H2T7 1088 aaKnown RBP14.52□□□□□ -0.09
CDC42BPB-202ENST00000558321 ABHD16BQ9H3Z7 469 aa14.52□□□□□ -0.09
CDC42BPB-202ENST00000558321 A1CFQ9NQ94 594 aaKnown RBP14.52□□□□□ -0.09
CDC42BPB-202ENST00000558321 ZSWIM5Q9P217 1185 aa14.52□□□□□ -0.09
CDC42BPB-202ENST00000558321 PRKAG2Q9UGJ0 569 aa14.52□□□□□ -0.09
CDC42BPB-202ENST00000558321 ATP11BQ9Y2G3 1177 aa14.52□□□□□ -0.09
CDC42BPB-202ENST00000558321 ASB14A6NK59 587 aa14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 MAGEA10P43363 369 aaPredicted RBP14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 RTP1P59025 263 aa14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 ZNF543Q08ER8 600 aa14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 MUM1L1Q5H9M0 696 aa14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 GPATCH4Q5T3I0 446 aaKnown RBP14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 ARMCX2Q7L311 632 aa14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 CCDC144CPQ8IYA2 1237 aa14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 PNMA1Q8ND90 353 aa14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 LBHD1Q9BQE6 289 aaPredicted RBP14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 UBAC1Q9BSL1 405 aa14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 PRO3102Q9H379 93 aa14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 SPC25Q9HBM1 224 aa14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 CYP39A1Q9NYL5 469 aa14.51□□□□□ -0.09
CDC42BPB-202ENST00000558321 RAD50Q92878 1312 aa14.5□□□□□ -0.09
CDC42BPB-202ENST00000558321 SOWAHBA6NEL2 793 aa14.5□□□□□ -0.09
CDC42BPB-202ENST00000558321 GOLGA8HP0CJ92 632 aa14.5□□□□□ -0.09
CDC42BPB-202ENST00000558321 TRDNQ13061 729 aa14.5□□□□□ -0.09
CDC42BPB-202ENST00000558321 CCDC144BQ3MJ40 725 aa14.5□□□□□ -0.09
CDC42BPB-202ENST00000558321 NOL8Q76FK4 1167 aaKnown RBP14.5□□□□□ -0.09
CDC42BPB-202ENST00000558321 FAM133AQ8N9E0 248 aa14.5□□□□□ -0.09
CDC42BPB-202ENST00000558321 LENG1Q96BZ8 264 aaPredicted RBP14.5□□□□□ -0.09
CDC42BPB-202ENST00000558321 GDF15Q99988 308 aa14.5□□□□□ -0.09
CDC42BPB-202ENST00000558321 IL25Q9H293 177 aa14.5□□□□□ -0.09
CDC42BPB-202ENST00000558321 PNMA2Q9UL42 364 aa14.5□□□□□ -0.09
CDC42BPB-202ENST00000558321 U3KPZ7 1027 aaPredicted RBP14.5□□□□□ -0.09
CDC42BPB-202ENST00000558321 A0A1W2PPC1 479 aa14.49□□□□□ -0.09
CDC42BPB-202ENST00000558321 DUSP11O75319 330 aaKnown RBP14.49□□□□□ -0.09
CDC42BPB-202ENST00000558321 SNHG28P0DPA3 235 aa14.49□□□□□ -0.09
CDC42BPB-202ENST00000558321 BMP8BP34820 402 aa14.49□□□□□ -0.09
CDC42BPB-202ENST00000558321 MDM2Q00987 491 aaPredicted RBP14.49□□□□□ -0.09
CDC42BPB-202ENST00000558321 BAATQ14032 418 aaPredicted RBP14.49□□□□□ -0.09
CDC42BPB-202ENST00000558321 ENAHQ8N8S7 591 aaPredicted RBP14.49□□□□□ -0.09
CDC42BPB-202ENST00000558321 ANKS1AQ92625 1134 aa14.49□□□□□ -0.09
CDC42BPB-202ENST00000558321 FGD4Q96M96 766 aa14.49□□□□□ -0.09
CDC42BPB-202ENST00000558321 UBE2OQ9C0C9 1292 aaKnown RBP14.49□□□□□ -0.09
CDC42BPB-202ENST00000558321 UBA5Q9GZZ9 404 aa14.49□□□□□ -0.09
CDC42BPB-202ENST00000558321 PHF24Q9UPV7 400 aa14.49□□□□□ -0.09
CDC42BPB-202ENST00000558321 TNKSO95271 1327 aa14.48□□□□□ -0.09
CDC42BPB-202ENST00000558321 SYNRGQ9UMZ2 1314 aa14.48□□□□□ -0.09
CDC42BPB-202ENST00000558321 PTPDC1A2A3K4 754 aa14.48□□□□□ -0.09
CDC42BPB-202ENST00000558321 DHX16O60231 1041 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms