RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
MARK3-212ENST00000558223 NMIQ13287 307 aaPredicted RBP8.39□□□□□ -1.07
MARK3-212ENST00000558223 IFIT5Q13325 482 aaKnown RBP8.39□□□□□ -1.07
MARK3-212ENST00000558223 SEPT6Q14141 434 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 EPHA10Q5JZY3 1008 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 WDR78Q5VTH9 848 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 LARP1BQ659C4 914 aaKnown RBP8.39□□□□□ -1.07
MARK3-212ENST00000558223 XKR5Q6UX68 686 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 MYO1HQ8N1T3 1032 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 PIGBQ92521 554 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 DSCC1Q9BVC3 393 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 SIL1Q9H173 461 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 SUV39H2Q9H5I1 410 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 RAB6BQ9NRW1 208 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 PFDN2Q9UHV9 154 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 DBNLQ9UJU6 430 aaKnown RBP8.39□□□□□ -1.07
MARK3-212ENST00000558223 PALD1Q9ULE6 856 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 PPT2Q9UMR5 302 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 RBM8AQ9Y5S9 174 aaKnown RBP8.39□□□□□ -1.07
MARK3-212ENST00000558223 PAPPAQ13219 1627 aa8.39□□□□□ -1.07
MARK3-212ENST00000558223 BCL9O00512 1426 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 UBR2Q8IWV8 1755 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 SLC27A2O14975 620 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 GREM1O60565 184 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 TOM1O60784 492 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 RASGRP1O95267 797 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 FOSP01100 380 aaPredicted RBP8.38□□□□□ -1.07
MARK3-212ENST00000558223 POLR3DP05423 398 aaPredicted RBP8.38□□□□□ -1.07
MARK3-212ENST00000558223 AK2P54819 239 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 PARP10Q53GL7 1025 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 LCE2CQ5TA81 110 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 FBXW10Q5XX13 1052 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 MCTP1Q6DN14 999 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 PRPF40BQ6NWY9 871 aaKnown RBP8.38□□□□□ -1.07
MARK3-212ENST00000558223 TTLL7Q6ZT98 887 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 GOLM1Q8NBJ4 401 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 MFSD3Q96ES6 412 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 JAKMIP1Q96N16 626 aaKnown RBP8.38□□□□□ -1.07
MARK3-212ENST00000558223 GRPEL1Q9HAV7 217 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 KCNQ5Q9NR82 932 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 LMBRD1Q9NUN5 540 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 MAP4K5Q9Y4K4 846 aa8.38□□□□□ -1.07
MARK3-212ENST00000558223 COL22A1Q8NFW1 1626 aaPredicted RBP8.38□□□□□ -1.07
MARK3-212ENST00000558223 C5P01031 1676 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 ANKRD18BA2A2Z9 1011 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 PDE8AO60658 829 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 TAF5LO75529 589 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 MICAL2O94851 1124 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 BPNT1O95861 308 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 IFIT1P09914 478 aaKnown RBP8.37□□□□□ -1.07
MARK3-212ENST00000558223 ZSCAN22P10073 491 aaPredicted RBP8.37□□□□□ -1.07
MARK3-212ENST00000558223 CYP19A1P11511 503 aaPredicted RBP8.37□□□□□ -1.07
MARK3-212ENST00000558223 SNRPBP14678 240 aaKnown RBP8.37□□□□□ -1.07
MARK3-212ENST00000558223 RPS6KB1P23443 525 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 STAT3P40763 770 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 SSRP1Q08945 709 aaKnown RBP8.37□□□□□ -1.07
MARK3-212ENST00000558223 GRM2Q14416 872 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 C1orf53Q5VUE5 145 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 WWC2Q6AWC2 1192 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 ATG9AQ7Z3C6 839 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 THNSL2Q86YJ6 484 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 NIM1KQ8IY84 436 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 FBXL16Q8N461 479 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 ZGPATQ8N5A5 531 aaKnown RBP8.37□□□□□ -1.07
MARK3-212ENST00000558223 FAM169BQ8N8A8 192 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 GPATCH11Q8N954 259 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 JMYQ8N9B5 988 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 RHOVQ96L33 236 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 NEK1Q96PY6 1258 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 FERD3LQ96RJ6 166 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 LLPHQ9BRT6 129 aaKnown RBP8.37□□□□□ -1.07
MARK3-212ENST00000558223 UPF3BQ9BZI7 483 aaKnown RBP8.37□□□□□ -1.07
MARK3-212ENST00000558223 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.37□□□□□ -1.078e-8■□□□□ 10.8
MARK3-212ENST00000558223 PRDM10Q9NQV6 1147 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 PAG1Q9NWQ8 432 aa8.37□□□□□ -1.07
MARK3-212ENST00000558223 RPAP1Q9BWH6 1393 aaPredicted RBP8.36□□□□□ -1.07
MARK3-212ENST00000558223 SHTN1A0MZ66 631 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 RNF113AO15541 343 aaKnown RBP8.36□□□□□ -1.07
MARK3-212ENST00000558223 WIPF1O43516 503 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 STX6O43752 255 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 SCGB1D2O95969 90 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 PF4P02776 101 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 UQCRFS1P1P0C7P4 283 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 PTH1RQ03431 593 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 GRIN2CQ14957 1233 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 LRRC41Q15345 812 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 DDB1Q16531 1140 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 TM4SF20Q53R12 229 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 PDE12Q6L8Q7 609 aaKnown RBP8.36□□□□□ -1.07
MARK3-212ENST00000558223 KRBA2Q6ZNG9 492 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 C14orf80Q86SX3 495 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 SLITRK4Q8IW52 837 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 DNAJC10Q8IXB1 793 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 GALNT12Q8IXK2 581 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 CHPFQ8IZ52 775 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 FAM43AQ8N2R8 423 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 FAM184AQ8NB25 1140 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 ZSWIM2Q8NEG5 633 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 OR6P1Q8NGX9 317 aa8.36□□□□□ -1.07
MARK3-212ENST00000558223 ATL2Q8NHH9 583 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms