RNA–Protein interactions for RNA: ENST00000558103.1

CLPX-202, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 5

Gene CLPX, Length 605 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-202ENST00000558103 RPS26P62854 115 aaKnown RBP8.36□□□□□ -1.07
CLPX-202ENST00000558103 USHBP1Q8N6Y0 703 aa8.36□□□□□ -1.07
CLPX-202ENST00000558103 SHKBP1Q8TBC3 707 aa8.36□□□□□ -1.07
CLPX-202ENST00000558103 MFSD14AQ96MC6 490 aa8.36□□□□□ -1.07
CLPX-202ENST00000558103 NOC4LQ9BVI4 516 aaKnown RBP8.36□□□□□ -1.07
CLPX-202ENST00000558103 VTI1BQ9UEU0 232 aa8.36□□□□□ -1.07
CLPX-202ENST00000558103 CCNL1Q9UK58 526 aaPredicted RBP8.36□□□□□ -1.07
CLPX-202ENST00000558103 BRCA1P38398 1863 aaKnown RBP8.36□□□□□ -1.07
CLPX-202ENST00000558103 VIRMAQ69YN4 1812 aaKnown RBP8.36□□□□□ -1.07
CLPX-202ENST00000558103 PALLDQ8WX93 1383 aa8.35□□□□□ -1.07
CLPX-202ENST00000558103 C4AP0C0L4 1744 aa8.35□□□□□ -1.07
CLPX-202ENST00000558103 RLBP1P12271 317 aa8.35□□□□□ -1.07
CLPX-202ENST00000558103 C1QTNF8P60827 252 aa8.35□□□□□ -1.07
CLPX-202ENST00000558103 TMF1P82094 1093 aa8.35□□□□□ -1.07
CLPX-202ENST00000558103 GPR162Q16538 588 aa8.35□□□□□ -1.07
CLPX-202ENST00000558103 HSP90AB2PQ58FF8 381 aa8.35□□□□□ -1.07
CLPX-202ENST00000558103 COL23A1Q86Y22 540 aaPredicted RBP8.35□□□□□ -1.07
CLPX-202ENST00000558103 CRELD1Q96HD1 420 aa8.35□□□□□ -1.07
CLPX-202ENST00000558103 PIDD1Q9HB75 910 aa8.35□□□□□ -1.07
CLPX-202ENST00000558103 PRKAG2Q9UGJ0 569 aa8.35□□□□□ -1.07
CLPX-202ENST00000558103 CICQ96RK0 1608 aaPredicted RBP8.34□□□□□ -1.07
CLPX-202ENST00000558103 WDR64B1ANS9 1081 aa8.34□□□□□ -1.07
CLPX-202ENST00000558103 CYP27B1O15528 508 aa8.34□□□□□ -1.07
CLPX-202ENST00000558103 PTPN11Q06124 597 aaPredicted RBP8.34□□□□□ -1.07
CLPX-202ENST00000558103 TTLL4Q14679 1199 aa8.34□□□□□ -1.07
CLPX-202ENST00000558103 SEZ6L2Q6UXD5 910 aa8.34□□□□□ -1.07
CLPX-202ENST00000558103 AGMOQ6ZNB7 445 aa8.34□□□□□ -1.07
CLPX-202ENST00000558103 SMYD4Q8IYR2 804 aaPredicted RBP8.34□□□□□ -1.07
CLPX-202ENST00000558103 FBXL6Q8N531 539 aa8.34□□□□□ -1.07
CLPX-202ENST00000558103 RNF214Q8ND24 703 aa8.34□□□□□ -1.07
CLPX-202ENST00000558103 GIMAP7Q8NHV1 300 aa8.34□□□□□ -1.07
CLPX-202ENST00000558103 RAPGEF4Q8WZA2 1011 aa8.34□□□□□ -1.07
CLPX-202ENST00000558103 PCDHA4Q9UN74 947 aa8.34□□□□□ -1.07
CLPX-202ENST00000558103 DAGLAQ9Y4D2 1042 aa8.34□□□□□ -1.07
CLPX-202ENST00000558103 NSD3Q9BZ95 1437 aa8.34□□□□□ -1.07
CLPX-202ENST00000558103 PRR19A6NJB7 356 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 RNGTTO60942 597 aaKnown RBP8.33□□□□□ -1.08
CLPX-202ENST00000558103 F13BP05160 661 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 ZNF16P17020 682 aaPredicted RBP8.33□□□□□ -1.08
CLPX-202ENST00000558103 ADMP35318 185 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 LIG3P49916 1009 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 RING1Q06587 406 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 MAP3K11Q16584 847 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 ZAR1Q86SH2 424 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 C12orf40Q86WS4 652 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 SHISA5Q8N114 240 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 TBC1D32Q96NH3 1257 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 C1GALT1Q9NS00 363 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 PCOLCE2Q9UKZ9 415 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 CSADQ9Y600 493 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 ADCY9O60503 1353 aa8.33□□□□□ -1.08
CLPX-202ENST00000558103 N4BP2Q86UW6 1770 aaPredicted RBP8.33□□□□□ -1.08
CLPX-202ENST00000558103 MYH14Q7Z406 1995 aaKnown RBP8.32□□□□□ -1.08
CLPX-202ENST00000558103 DCDC2CA8MYV0 355 aa8.32□□□□□ -1.08
CLPX-202ENST00000558103 DYNC1LI2O43237 492 aaPredicted RBP8.32□□□□□ -1.08
CLPX-202ENST00000558103 TGFB1P01137 390 aa8.32□□□□□ -1.08
CLPX-202ENST00000558103 HCLS1P14317 486 aaPredicted RBP8.32□□□□□ -1.08
CLPX-202ENST00000558103 FZD5Q13467 585 aa8.32□□□□□ -1.08
CLPX-202ENST00000558103 AMIGO3Q86WK7 504 aa8.32□□□□□ -1.08
CLPX-202ENST00000558103 GATA6Q92908 595 aa8.32□□□□□ -1.08
CLPX-202ENST00000558103 LGR6Q9HBX8 967 aa8.32□□□□□ -1.08
CLPX-202ENST00000558103 ATG3Q9NT62 314 aa8.32□□□□□ -1.08
CLPX-202ENST00000558103 PCDHB5Q9Y5E4 795 aa8.32□□□□□ -1.08
CLPX-202ENST00000558103 PLEKHG2Q9H7P9 1386 aa8.32□□□□□ -1.08
CLPX-202ENST00000558103 SCN11AQ9UI33 1791 aa8.31□□□□□ -1.08
CLPX-202ENST00000558103 LMNB1P20700 586 aa8.31□□□□□ -1.08
CLPX-202ENST00000558103 MRPL58Q14197 206 aaKnown RBP8.31□□□□□ -1.08
CLPX-202ENST00000558103 INPP5AQ14642 412 aa8.31□□□□□ -1.08
CLPX-202ENST00000558103 PPM1JQ5JR12 505 aa8.31□□□□□ -1.08
CLPX-202ENST00000558103 GAL3ST3Q96A11 431 aa8.31□□□□□ -1.08
CLPX-202ENST00000558103 BCL11AQ9H165 835 aa8.31□□□□□ -1.08
CLPX-202ENST00000558103 SSU72Q9NP77 194 aaKnown RBP8.31□□□□□ -1.08
CLPX-202ENST00000558103 ARFGEF1Q9Y6D6 1849 aa8.31□□□□□ -1.08
CLPX-202ENST00000558103 ATP10DQ9P241 1426 aa8.3□□□□□ -1.08
CLPX-202ENST00000558103 TJP1Q07157 1748 aa8.3□□□□□ -1.08
CLPX-202ENST00000558103 FANCGO15287 622 aa8.3□□□□□ -1.08
CLPX-202ENST00000558103 GRIN3BO60391 1043 aa8.3□□□□□ -1.08
CLPX-202ENST00000558103 NEFMP07197 916 aa8.3□□□□□ -1.08
CLPX-202ENST00000558103 NPM2Q86SE8 214 aaKnown RBP8.3□□□□□ -1.08
CLPX-202ENST00000558103 FLAD1Q8NFF5 587 aa8.3□□□□□ -1.08
CLPX-202ENST00000558103 ISL2Q96A47 359 aa8.3□□□□□ -1.08
CLPX-202ENST00000558103 OSBPL1AQ9BXW6 950 aa8.3□□□□□ -1.08
CLPX-202ENST00000558103 CD2APQ9Y5K6 639 aa8.3□□□□□ -1.08
CLPX-202ENST00000558103 KDRP35968 1356 aa8.3□□□□□ -1.08
CLPX-202ENST00000558103 WASHC2AQ641Q2 1341 aa8.29□□□□□ -1.08
CLPX-202ENST00000558103 TFE3P19532 575 aaPredicted RBP8.29□□□□□ -1.08
CLPX-202ENST00000558103 HMGB2P26583 209 aaKnown RBP8.29□□□□□ -1.08
CLPX-202ENST00000558103 CPSF6Q16630 551 aaKnown RBP eCLIP8.29□□□□□ -1.08
CLPX-202ENST00000558103 INTS5Q6P9B9 1019 aaKnown RBP8.29□□□□□ -1.08
CLPX-202ENST00000558103 OGFOD3Q6PK18 319 aa8.29□□□□□ -1.08
CLPX-202ENST00000558103 CYFIP1Q7L576 1253 aa8.29□□□□□ -1.08
CLPX-202ENST00000558103 HDXQ7Z353 690 aa8.29□□□□□ -1.08
CLPX-202ENST00000558103 PIGBQ92521 554 aa8.29□□□□□ -1.08
CLPX-202ENST00000558103 SMARCC1Q92922 1105 aaPredicted RBP8.29□□□□□ -1.08
CLPX-202ENST00000558103 ELMO3Q96BJ8 720 aa8.29□□□□□ -1.08
CLPX-202ENST00000558103 FMNL2Q96PY5 1086 aa8.29□□□□□ -1.08
CLPX-202ENST00000558103 METTL22Q9BUU2 404 aaPredicted RBP8.29□□□□□ -1.08
CLPX-202ENST00000558103 RSRP1Q9BUV0 290 aa8.29□□□□□ -1.08
CLPX-202ENST00000558103 PIM2Q9P1W9 311 aa8.29□□□□□ -1.08
CLPX-202ENST00000558103 TLR6Q9Y2C9 796 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms