RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 RPAP3Q9H6T3 665 aaPredicted RBP14.31□□□□□ -0.12
TPM1-209ENST00000558072 ZCCHC17Q9NP64 241 aaKnown RBP14.31□□□□□ -0.12
TPM1-209ENST00000558072 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
TPM1-209ENST00000558072 CCL15-CCL14A0A0B4J2E2 113 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 FLOT1O75955 427 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 HSPA6P17066 643 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 GNA11P29992 359 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 OAZ1P54368 228 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 IRX3P78415 501 aaPredicted RBP14.3□□□□□ -0.12
TPM1-209ENST00000558072 CCL15Q16663 113 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 SLC35G1Q2M3R5 365 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 DEFB115Q30KQ5 88 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 CATSPERGQ6ZRH7 1159 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 CMTR1Q8N1G2 835 aaKnown RBP14.3□□□□□ -0.12
TPM1-209ENST00000558072 SAMD3Q8N6K7 520 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 AMNQ9BXJ7 453 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 UBA5Q9GZZ9 404 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 ZSCAN16Q9H4T2 348 aaPredicted RBP14.3□□□□□ -0.12
TPM1-209ENST00000558072 VAT1LQ9HCJ6 419 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 FBXO28Q9NVF7 368 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 PPP1R9AQ9ULJ8 1098 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 PRR12Q9ULL5 1215 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 AGTPBP1Q9UPW5 1226 aa14.3□□□□□ -0.12
TPM1-209ENST00000558072 RLFQ13129 1914 aa14.29□□□□□ -0.12
TPM1-209ENST00000558072 IGF2BP3O00425 579 aaKnown RBP eCLIP14.29□□□□□ -0.12
TPM1-209ENST00000558072 FDPSP14324 419 aaKnown RBP14.29□□□□□ -0.12
TPM1-209ENST00000558072 SYT1P21579 422 aa14.29□□□□□ -0.12
TPM1-209ENST00000558072 COPB2P35606 906 aa14.29□□□□□ -0.12
TPM1-209ENST00000558072 SLC16A2P36021 539 aa14.29□□□□□ -0.12
TPM1-209ENST00000558072 KIF23Q02241 960 aaPredicted RBP14.29□□□□□ -0.12
TPM1-209ENST00000558072 GNL2Q13823 731 aaKnown RBP14.29□□□□□ -0.12
TPM1-209ENST00000558072 GPAT2Q6NUI2 795 aa14.29□□□□□ -0.12
TPM1-209ENST00000558072 FAM43AQ8N2R8 423 aa14.29□□□□□ -0.12
TPM1-209ENST00000558072 FBXO18Q8NFZ0 1043 aa14.29□□□□□ -0.12
TPM1-209ENST00000558072 KIFC2Q96AC6 838 aa14.29□□□□□ -0.12
TPM1-209ENST00000558072 PTPN18Q99952 460 aa14.29□□□□□ -0.12
TPM1-209ENST00000558072 JMJD4Q9H9V9 463 aa14.29□□□□□ -0.12
TPM1-209ENST00000558072 C6orf50Q9HD87 102 aa14.29□□□□□ -0.12
TPM1-209ENST00000558072 BARHL2Q9NY43 387 aa14.29□□□□□ -0.12
TPM1-209ENST00000558072 ESYT2A0FGR8 921 aa14.28□□□□□ -0.12
TPM1-209ENST00000558072 BTBD19C9JJ37 291 aa14.28□□□□□ -0.12
TPM1-209ENST00000558072 CYTH3O43739 400 aa14.28□□□□□ -0.12
TPM1-209ENST00000558072 COL11A1P12107 1806 aaPredicted RBP14.28□□□□□ -0.12
TPM1-209ENST00000558072 DSG3P32926 999 aa14.28□□□□□ -0.12
TPM1-209ENST00000558072 DDIT3P35638 169 aa14.28□□□□□ -0.12
TPM1-209ENST00000558072 MRPL12P52815 198 aaKnown RBP14.28□□□□□ -0.12
TPM1-209ENST00000558072 NLRP5P59047 1200 aa14.28□□□□□ -0.12
TPM1-209ENST00000558072 SREBF2Q12772 1141 aa14.28□□□□□ -0.12
TPM1-209ENST00000558072 CDC37Q16543 378 aaPredicted RBP14.28□□□□□ -0.12
TPM1-209ENST00000558072 TKFCQ3LXA3 575 aa14.28□□□□□ -0.12
TPM1-209ENST00000558072 ANKRD23Q86SG2 305 aa14.28□□□□□ -0.12
TPM1-209ENST00000558072 FBXO11Q86XK2 927 aa14.28□□□□□ -0.12
TPM1-209ENST00000558072 HOMER1Q86YM7 354 aa14.28□□□□□ -0.12
TPM1-209ENST00000558072 PIBF1Q8WXW3 757 aa14.28□□□□□ -0.12
TPM1-209ENST00000558072 PIGSQ96S52 555 aa14.28□□□□□ -0.12
TPM1-209ENST00000558072 RANBP17Q9H2T7 1088 aaKnown RBP14.28□□□□□ -0.12
TPM1-209ENST00000558072 ZSWIM8A7E2V4 1837 aa14.27□□□□□ -0.12
TPM1-209ENST00000558072 A0A0G2JMZ2 1700 aa14.27□□□□□ -0.12
TPM1-209ENST00000558072 ABCB11O95342 1321 aa14.27□□□□□ -0.12
TPM1-209ENST00000558072 ZSCAN22P10073 491 aaPredicted RBP14.27□□□□□ -0.13
TPM1-209ENST00000558072 NAPAP54920 295 aa14.27□□□□□ -0.13
TPM1-209ENST00000558072 PKN1Q16512 942 aa14.27□□□□□ -0.13
TPM1-209ENST00000558072 LBX2Q6XYB7 198 aa14.27□□□□□ -0.13
TPM1-209ENST00000558072 HEATR3Q7Z4Q2 680 aa14.27□□□□□ -0.13
TPM1-209ENST00000558072 BRAPQ7Z569 592 aa14.27□□□□□ -0.13
TPM1-209ENST00000558072 MAP3K20Q9NYL2 800 aaKnown RBP14.27□□□□□ -0.13
TPM1-209ENST00000558072 MRPL11Q9Y3B7 192 aaKnown RBP14.27□□□□□ -0.13
TPM1-209ENST00000558072 hCG_1642624A0A1W2PR95 340 aa14.26□□□□□ -0.13
TPM1-209ENST00000558072 TESPA1A2RU30 521 aaPredicted RBP14.26□□□□□ -0.13
TPM1-209ENST00000558072 VPS37CA5D8V6 355 aaPredicted RBP14.26□□□□□ -0.13
TPM1-209ENST00000558072 ATP2A1O14983 1001 aa14.26□□□□□ -0.13
TPM1-209ENST00000558072 ECM2O94769 699 aaPredicted RBP14.26□□□□□ -0.13
TPM1-209ENST00000558072 ICAM1P05362 532 aa14.26□□□□□ -0.13
TPM1-209ENST00000558072 CYP2C8P10632 490 aa14.26□□□□□ -0.13
TPM1-209ENST00000558072 QRICH1Q2TAL8 776 aa14.26□□□□□ -0.13
TPM1-209ENST00000558072 ATL3Q6DD88 541 aa14.26□□□□□ -0.13
TPM1-209ENST00000558072 POTEEQ6S8J3 1075 aa14.26□□□□□ -0.13
TPM1-209ENST00000558072 MCF2L2Q86YR7 1114 aa14.26□□□□□ -0.13
TPM1-209ENST00000558072 FOXP1Q9H334 677 aaPredicted RBP14.26□□□□□ -0.13
TPM1-209ENST00000558072 SLC38A10Q9HBR0 1119 aa14.26□□□□□ -0.13
TPM1-209ENST00000558072 ADAMTS5Q9UNA0 930 aa14.26□□□□□ -0.13
TPM1-209ENST00000558072 PCDHA1Q9Y5I3 950 aa14.26□□□□□ -0.13
TPM1-209ENST00000558072 VWA5AO00534 786 aa14.25□□□□□ -0.13
TPM1-209ENST00000558072 BRD1O95696 1058 aa14.25□□□□□ -0.13
TPM1-209ENST00000558072 MMP1P03956 469 aa14.25□□□□□ -0.13
TPM1-209ENST00000558072 KRT2P35908 639 aa14.25□□□□□ -0.13
TPM1-209ENST00000558072 GCLCP48506 637 aaPredicted RBP14.25□□□□□ -0.13
TPM1-209ENST00000558072 NOGQ13253 232 aa14.25□□□□□ -0.13
TPM1-209ENST00000558072 KRT40Q6A162 431 aa14.25□□□□□ -0.13
TPM1-209ENST00000558072 DAGLBQ8NCG7 672 aa14.25□□□□□ -0.13
TPM1-209ENST00000558072 CUL5Q93034 780 aa14.25□□□□□ -0.13
TPM1-209ENST00000558072 ATG4CQ96DT6 458 aa14.25□□□□□ -0.13
TPM1-209ENST00000558072 PARK7Q99497 189 aaKnown RBP14.25□□□□□ -0.13
TPM1-209ENST00000558072 PHF20Q9BVI0 1012 aa14.25□□□□□ -0.13
TPM1-209ENST00000558072 ZMYND12Q9H0C1 365 aa14.25□□□□□ -0.13
TPM1-209ENST00000558072 MYH6P13533 1939 aa14.25□□□□□ -0.13
TPM1-209ENST00000558072 STXBP3O00186 592 aa14.24□□□□□ -0.13
TPM1-209ENST00000558072 PDHXO00330 501 aa14.24□□□□□ -0.13
TPM1-209ENST00000558072 ALDH1A1P00352 501 aa14.24□□□□□ -0.13
TPM1-209ENST00000558072 FOSP01100 380 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms