RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ZNF536O15090 1300 aa29.75■■■□□ 2.35
SMAD6-202ENST00000557916 ZBTB43O43298 467 aa29.74■■■□□ 2.35
SMAD6-202ENST00000557916 NAP1L2Q9ULW6 460 aaPredicted RBP29.74■■■□□ 2.35
SMAD6-202ENST00000557916 MGAMO43451 1857 aa29.74■■■□□ 2.35
SMAD6-202ENST00000557916 COPB2P35606 906 aa29.73■■■□□ 2.35
SMAD6-202ENST00000557916 FANCBQ8NB91 859 aa29.73■■■□□ 2.35
SMAD6-202ENST00000557916 AGBL1Q96MI9 1066 aa29.73■■■□□ 2.35
SMAD6-202ENST00000557916 JMJD4Q9H9V9 463 aa29.73■■■□□ 2.35
SMAD6-202ENST00000557916 RIPK3Q9Y572 518 aa29.73■■■□□ 2.35
SMAD6-202ENST00000557916 RBM25P49756 843 aaKnown RBP29.72■■■□□ 2.35
SMAD6-202ENST00000557916 PRMT2P55345 433 aa29.72■■■□□ 2.35
SMAD6-202ENST00000557916 PRKCZQ05513 592 aa29.72■■■□□ 2.35
SMAD6-202ENST00000557916 TOB2Q14106 344 aaPredicted RBP29.72■■■□□ 2.35
SMAD6-202ENST00000557916 PKN2Q16513 984 aaKnown RBP29.72■■■□□ 2.35
SMAD6-202ENST00000557916 PTPN22Q9Y2R2 807 aa29.72■■■□□ 2.35
SMAD6-202ENST00000557916 IVNS1ABPQ9Y6Y0 642 aa29.72■■■□□ 2.35
SMAD6-202ENST00000557916 ICAM1P05362 532 aa29.71■■■□□ 2.35
SMAD6-202ENST00000557916 GNAQP50148 359 aa29.71■■■□□ 2.35
SMAD6-202ENST00000557916 LZTS2Q9BRK4 669 aa29.71■■■□□ 2.35
SMAD6-202ENST00000557916 GABRQQ9UN88 632 aa29.71■■■□□ 2.35
SMAD6-202ENST00000557916 FLT3LGP49771 235 aa29.71■■■□□ 2.35
SMAD6-202ENST00000557916 CDC37Q16543 378 aaPredicted RBP29.71■■■□□ 2.35
SMAD6-202ENST00000557916 NBPF11Q86T75 865 aa29.71■■■□□ 2.35
SMAD6-202ENST00000557916 RIOX1Q9H6W3 641 aa29.71■■■□□ 2.35
SMAD6-202ENST00000557916 GJD2Q9UKL4 321 aa29.71■■■□□ 2.35
SMAD6-202ENST00000557916 CCPG1Q9ULG6 757 aa29.71■■■□□ 2.35
SMAD6-202ENST00000557916 GOLGA8BA8MQT2 603 aa29.7■■■□□ 2.34
SMAD6-202ENST00000557916 STRNO43815 780 aa29.7■■■□□ 2.34
SMAD6-202ENST00000557916 PTPREP23469 700 aa29.7■■■□□ 2.34
SMAD6-202ENST00000557916 RCAN1P53805 252 aa29.7■■■□□ 2.34
SMAD6-202ENST00000557916 SLC35G1Q2M3R5 365 aa29.7■■■□□ 2.34
SMAD6-202ENST00000557916 NUDT12Q9BQG2 462 aa29.7■■■□□ 2.34
SMAD6-202ENST00000557916 MCOLN1Q9GZU1 580 aa29.7■■■□□ 2.34
SMAD6-202ENST00000557916 SLC15A5A6NIM6 579 aa29.69■■■□□ 2.34
SMAD6-202ENST00000557916 GOLGA8AA7E2F4 631 aa29.69■■■□□ 2.34
SMAD6-202ENST00000557916 PLEKHA8P1O95397 391 aa29.69■■■□□ 2.34
SMAD6-202ENST00000557916 ALAS1P13196 640 aa29.69■■■□□ 2.34
SMAD6-202ENST00000557916 RTN1Q16799 776 aa29.69■■■□□ 2.34
SMAD6-202ENST00000557916 MORN1Q5T089 497 aa29.69■■■□□ 2.34
SMAD6-202ENST00000557916 FBXO46Q6PJ61 603 aaPredicted RBP29.69■■■□□ 2.34
SMAD6-202ENST00000557916 SOCS4Q8WXH5 440 aa29.69■■■□□ 2.34
SMAD6-202ENST00000557916 ALDH8A1Q9H2A2 487 aaPredicted RBP29.69■■■□□ 2.34
SMAD6-202ENST00000557916 HOMER2Q9NSB8 354 aa29.69■■■□□ 2.34
SMAD6-202ENST00000557916 PNMA2Q9UL42 364 aa29.69■■■□□ 2.34
SMAD6-202ENST00000557916 CYTH3O43739 400 aa29.68■■■□□ 2.34
SMAD6-202ENST00000557916 NEK4P51957 841 aa29.68■■■□□ 2.34
SMAD6-202ENST00000557916 EVCP57679 992 aa29.68■■■□□ 2.34
SMAD6-202ENST00000557916 QRICH1Q2TAL8 776 aa29.68■■■□□ 2.34
SMAD6-202ENST00000557916 TKFCQ3LXA3 575 aa29.68■■■□□ 2.34
SMAD6-202ENST00000557916 CHST13Q8NET6 341 aa29.68■■■□□ 2.34
SMAD6-202ENST00000557916 RAET1EQ8TD07 263 aa29.68■■■□□ 2.34
SMAD6-202ENST00000557916 MTMR8Q96EF0 704 aa29.68■■■□□ 2.34
SMAD6-202ENST00000557916 KIF2CQ99661 725 aa29.68■■■□□ 2.34
SMAD6-202ENST00000557916 RBM28Q9NW13 759 aaKnown RBP29.68■■■□□ 2.34
SMAD6-202ENST00000557916 FBXO40Q9UH90 709 aa29.68■■■□□ 2.34
SMAD6-202ENST00000557916 PTCH2Q9Y6C5 1203 aa29.68■■■□□ 2.34
SMAD6-202ENST00000557916 FCER1AP12319 257 aa29.67■■■□□ 2.34
SMAD6-202ENST00000557916 SMARCA1P28370 1054 aa29.67■■■□□ 2.34
SMAD6-202ENST00000557916 METAP2P50579 478 aaKnown RBP eCLIP29.67■■■□□ 2.342e-6■■■■□ 21.8
SMAD6-202ENST00000557916 GRB14Q14449 540 aa29.67■■■□□ 2.34
SMAD6-202ENST00000557916 SRBD1Q8N5C6 995 aaKnown RBP29.67■■■□□ 2.34
SMAD6-202ENST00000557916 TRERF1Q96PN7 1200 aa29.67■■■□□ 2.34
SMAD6-202ENST00000557916 LARP6Q9BRS8 491 aaKnown RBP29.67■■■□□ 2.34
SMAD6-202ENST00000557916 SPZ1Q9BXG8 430 aa29.67■■■□□ 2.34
SMAD6-202ENST00000557916 RNF146Q9NTX7 359 aa29.67■■■□□ 2.34
SMAD6-202ENST00000557916 DOCK3Q8IZD9 2030 aa29.67■■■□□ 2.34
SMAD6-202ENST00000557916 TAL1P17542 331 aaPredicted RBP29.66■■■□□ 2.34
SMAD6-202ENST00000557916 TMTC3Q6ZXV5 915 aa29.66■■■□□ 2.34
SMAD6-202ENST00000557916 ABRAQ8N0Z2 381 aa29.66■■■□□ 2.34
SMAD6-202ENST00000557916 CMTR1Q8N1G2 835 aaKnown RBP29.66■■■□□ 2.34
SMAD6-202ENST00000557916 PIGSQ96S52 555 aa29.66■■■□□ 2.34
SMAD6-202ENST00000557916 MMP19Q99542 508 aa29.66■■■□□ 2.34
SMAD6-202ENST00000557916 HPS5Q9UPZ3 1129 aa29.66■■■□□ 2.34
SMAD6-202ENST00000557916 ZBTB5O15062 677 aa29.65■■■□□ 2.34
SMAD6-202ENST00000557916 PDIA3P30101 505 aaKnown RBP29.65■■■□□ 2.34
SMAD6-202ENST00000557916 KCTD2Q14681 263 aa29.65■■■□□ 2.34
SMAD6-202ENST00000557916 PPP2R5BQ15173 497 aa29.65■■■□□ 2.34
SMAD6-202ENST00000557916 HOMER1Q86YM7 354 aa29.65■■■□□ 2.34
SMAD6-202ENST00000557916 CCDC82Q8N4S0 544 aa29.65■■■□□ 2.34
SMAD6-202ENST00000557916 USP6NLQ92738 828 aa29.65■■■□□ 2.34
SMAD6-202ENST00000557916 ACAD9Q9H845 621 aa29.65■■■□□ 2.34
SMAD6-202ENST00000557916 ADORA2AP29274 412 aa29.64■■■□□ 2.34
SMAD6-202ENST00000557916 CDC27P30260 824 aa29.64■■■□□ 2.34
SMAD6-202ENST00000557916 RGS2P41220 211 aa29.64■■■□□ 2.34
SMAD6-202ENST00000557916 AK2P54819 239 aa29.64■■■□□ 2.34
SMAD6-202ENST00000557916 MAP2K5Q13163 448 aa29.64■■■□□ 2.34
SMAD6-202ENST00000557916 IRF5Q13568 498 aa29.64■■■□□ 2.34
SMAD6-202ENST00000557916 ANKRD1Q15327 319 aa29.64■■■□□ 2.34
SMAD6-202ENST00000557916 USH1GQ495M9 461 aa29.64■■■□□ 2.34
SMAD6-202ENST00000557916 FBXO11Q86XK2 927 aa29.64■■■□□ 2.34
SMAD6-202ENST00000557916 TBC1D32Q96NH3 1257 aa29.64■■■□□ 2.34
SMAD6-202ENST00000557916 FAM217BQ9NTX9 383 aaPredicted RBP29.64■■■□□ 2.34
SMAD6-202ENST00000557916 CCDC196A0A1B0GTZ2 297 aa29.63■■■□□ 2.33
SMAD6-202ENST00000557916 CYP2B6P20813 491 aa29.63■■■□□ 2.33
SMAD6-202ENST00000557916 PIBF1Q8WXW3 757 aa29.63■■■□□ 2.33
SMAD6-202ENST00000557916 ZNF274Q96GC6 653 aaPredicted RBP29.63■■■□□ 2.33
SMAD6-202ENST00000557916 ADD1P35611 737 aaKnown RBP29.62■■■□□ 2.33
SMAD6-202ENST00000557916 MUM1L1Q5H9M0 696 aa29.62■■■□□ 2.33
SMAD6-202ENST00000557916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.62■■■□□ 2.33
SMAD6-202ENST00000557916 DPP9Q86TI2 863 aa29.62■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms