RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 SLC26A6Q9BXS9 759 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 ZSCAN16Q9H4T2 348 aaPredicted RBP8.57□□□□□ -1.04
SPG11-204ENST00000557866 ZFAND3Q9H8U3 227 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 TCP11L1Q9NUJ3 509 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 PIM2Q9P1W9 311 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 TFIP11Q9UBB9 837 aaKnown RBP8.57□□□□□ -1.04
SPG11-204ENST00000557866 CDV3Q9UKY7 258 aaKnown RBP8.57□□□□□ -1.04
SPG11-204ENST00000557866 KIF3AQ9Y496 699 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 GPSM3Q9Y4H4 160 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 KIAA1551Q9HCM1 1747 aa8.57□□□□□ -1.04
SPG11-204ENST00000557866 FSD2A1L4K1 749 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 KIF28PB7ZC32 967 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 RAD17O75943 681 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 CDKL5O76039 1030 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 DDAH1O94760 285 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 PLEKHA8P1O95397 391 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 VIL1P09327 827 aaKnown RBP8.56□□□□□ -1.04
SPG11-204ENST00000557866 SLURP2P0DP57 97 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 NCLP19338 710 aaKnown RBP8.56□□□□□ -1.04
SPG11-204ENST00000557866 IARSP41252 1262 aaKnown RBP8.56□□□□□ -1.04
SPG11-204ENST00000557866 NT5C2P49902 561 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 CACNB3P54284 484 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 SSRP1Q08945 709 aaKnown RBP8.56□□□□□ -1.04
SPG11-204ENST00000557866 DALRD3Q5D0E6 543 aaKnown RBP8.56□□□□□ -1.04
SPG11-204ENST00000557866 CAVIN1Q6NZI2 390 aaKnown RBP8.56□□□□□ -1.04
SPG11-204ENST00000557866 CPLX2Q6PUV4 134 aaKnown RBP8.56□□□□□ -1.04
SPG11-204ENST00000557866 CATIPQ7Z7H3 387 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 DGKHQ86XP1 1220 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 AMOTL1Q8IY63 956 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 ZNF444Q8N0Y2 327 aaPredicted RBP8.56□□□□□ -1.04
SPG11-204ENST00000557866 LARGE2Q8N3Y3 721 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 RGS22Q8NE09 1264 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 LEO1Q8WVC0 666 aaPredicted RBP8.56□□□□□ -1.04
SPG11-204ENST00000557866 PURBQ96QR8 312 aaKnown RBP8.56□□□□□ -1.04
SPG11-204ENST00000557866 OSBPL5Q9H0X9 879 aaPredicted RBP8.56□□□□□ -1.04
SPG11-204ENST00000557866 MKNK2Q9HBH9 465 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 TMEM63CQ9P1W3 806 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 NXF1Q9UBU9 619 aaKnown RBP8.56□□□□□ -1.04
SPG11-204ENST00000557866 SERPINA10Q9UK55 444 aa8.56□□□□□ -1.04
SPG11-204ENST00000557866 BAZ2AQ9UIF9 1905 aaKnown RBP8.55□□□□□ -1.04
SPG11-204ENST00000557866 CCDC196A0A1B0GTZ2 297 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 NFKBIEO00221 500 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 PSMD14O00487 310 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 UPP2O95045 317 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 NOVP48745 357 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 UBE2HP62256 183 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 KRT85P78386 507 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 KIF23Q02241 960 aaPredicted RBP8.55□□□□□ -1.04
SPG11-204ENST00000557866 PKN1Q16512 942 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 SLC35G1Q2M3R5 365 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 CFAP100Q494V2 611 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 KRT40Q6A162 431 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 TMTC3Q6ZXV5 915 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 GAS2L3Q86XJ1 694 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 NPAS3Q8IXF0 933 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 CCDC116Q8IYX3 515 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 CCDC82Q8N4S0 544 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 SRBD1Q8N5C6 995 aaKnown RBP8.55□□□□□ -1.04
SPG11-204ENST00000557866 NEDD1Q8NHV4 660 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 PGBD1Q96JS3 809 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 PRMT6Q96LA8 375 aaPredicted RBP8.55□□□□□ -1.04
SPG11-204ENST00000557866 USP28Q96RU2 1077 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 IDI2Q9BXS1 227 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 FTOQ9C0B1 505 aaKnown RBP eCLIP8.55□□□□□ -1.04
SPG11-204ENST00000557866 VPS33BQ9H267 617 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 SCN9AQ15858 1988 aa8.55□□□□□ -1.04
SPG11-204ENST00000557866 CCDC88AQ3V6T2 1871 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 IGKV6D-41A0A0C4DH26 115 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 MBD3O95983 291 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 TSPY3P0CV98 308 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 TSPY8P0CW00 308 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 AKR1B1P15121 316 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 SHMT1P34896 483 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 PRELPP51888 382 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 PPP2R5BQ15173 497 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 ZSCAN23Q3MJ62 389 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 SOGA3Q5TF21 947 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 SLC10A4Q96EP9 437 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 TMEM47Q9BQJ4 181 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 DNAJC18Q9H819 358 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 RBM28Q9NW13 759 aaKnown RBP8.54□□□□□ -1.04
SPG11-204ENST00000557866 PPP1R1BQ9UD71 204 aaPredicted RBP8.54□□□□□ -1.04
SPG11-204ENST00000557866 RCOR1Q9UKL0 485 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 ZNRF3Q9ULT6 936 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 CD2APQ9Y5K6 639 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 MYH2Q9UKX2 1941 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 DDX60LQ5H9U9 1706 aaKnown RBP8.54□□□□□ -1.04
SPG11-204ENST00000557866 ELP1O95163 1332 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 CNTNAP5Q8WYK1 1306 aa8.54□□□□□ -1.04
SPG11-204ENST00000557866 PLIN4Q96Q06 1357 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 ZNF646O15015 1829 aaPredicted RBP8.53□□□□□ -1.04
SPG11-204ENST00000557866 hCG_1642624A0A1W2PR95 340 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 DDTLA6NHG4 134 aaPredicted RBP8.53□□□□□ -1.04
SPG11-204ENST00000557866 PRPF3O43395 683 aaKnown RBP8.53□□□□□ -1.04
SPG11-204ENST00000557866 DEXIO95424 95 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 CALM1P0DP23 149 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 CALM2P0DP24 149 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 CALM3P0DP25 149 aa8.53□□□□□ -1.04
SPG11-204ENST00000557866 VEGFAP15692 232 aaPredicted RBP8.53□□□□□ -1.04
SPG11-204ENST00000557866 RBM5P52756 815 aaKnown RBP eCLIP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms