RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 TCEA3O75764 348 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 CRTAMO95727 393 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 MT-CO1P00395 513 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 CTSBP07858 339 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 BMP4P12644 408 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 IARSP41252 1262 aaKnown RBP4.78□□□□□ -1.64
TDP1-217ENST00000557782 ADCYAP1R1P41586 468 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 LSSP48449 732 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 PCBP4P57723 403 aaKnown RBP4.78□□□□□ -1.64
TDP1-217ENST00000557782 RNF4P78317 190 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 ID3Q02535 119 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 LMOD3Q0VAK6 560 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 ARHGAP29Q52LW3 1261 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 COBLL1Q53SF7 1204 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 ANO1Q5XXA6 986 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 GTF2IRD2BQ6EKJ0 949 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 TXNDC11Q6PKC3 985 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 TRIM67Q6ZTA4 783 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 USP53Q70EK8 1073 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 CDC37L1Q7L3B6 337 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 MTDHQ86UE4 582 aaKnown RBP4.78□□□□□ -1.64
TDP1-217ENST00000557782 GTF2IRD2Q86UP8 949 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 FCHSD1Q86WN1 690 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 CDAN1Q8IWY9 1227 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 CPA6Q8N4T0 437 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 AHCYL2Q96HN2 611 aaKnown RBP4.78□□□□□ -1.64
TDP1-217ENST00000557782 WDR18Q9BV38 432 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.78□□□□□ -1.64
TDP1-217ENST00000557782 CABP5Q9NP86 173 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 CASS4Q9NQ75 786 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 MAN1C1Q9NR34 630 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 RAD18Q9NS91 495 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 CGGBP1Q9UFW8 167 aaPredicted RBP4.78□□□□□ -1.64
TDP1-217ENST00000557782 MRFAP1Q9Y605 127 aa4.78□□□□□ -1.64
TDP1-217ENST00000557782 A0A087WZG4 1122 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 ZNF891A8MT65 544 aaPredicted RBP4.77□□□□□ -1.65
TDP1-217ENST00000557782 ADARB2-AS1A8MUL3 147 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 CBX4O00257 560 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 AOC2O75106 756 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 CFBP00751 764 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 AVPP01185 164 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 HSP90AA1P07900 732 aaKnown RBP4.77□□□□□ -1.65
TDP1-217ENST00000557782 GUCY1A3Q02108 690 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 DSG1Q02413 1049 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 KLF1Q13351 362 aaPredicted RBP4.77□□□□□ -1.65
TDP1-217ENST00000557782 NTRK3Q16288 839 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 SKOR2Q2VWA4 1001 aaPredicted RBP4.77□□□□□ -1.65
TDP1-217ENST00000557782 NOL9Q5SY16 702 aaKnown RBP4.77□□□□□ -1.65
TDP1-217ENST00000557782 STYK1Q6J9G0 422 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 HDGFL2Q7Z4V5 671 aaPredicted RBP4.77□□□□□ -1.65
TDP1-217ENST00000557782 SMAP1Q8IYB5 467 aaPredicted RBP4.77□□□□□ -1.65
TDP1-217ENST00000557782 NXPE1Q8N323 547 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 CBARPQ8N350 705 aaPredicted RBP4.77□□□□□ -1.65
TDP1-217ENST00000557782 ARHGEF39Q8N4T4 335 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 CCDC155Q8N6L0 562 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 KLHL23Q8NBE8 558 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 SMC1BQ8NDV3 1235 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 DCAF4Q8WV16 495 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 AIFM3Q96NN9 605 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 GPR101Q96P66 508 aaPredicted RBP4.77□□□□□ -1.65
TDP1-217ENST00000557782 NUP88Q99567 741 aaPredicted RBP4.77□□□□□ -1.65
TDP1-217ENST00000557782 DPH2Q9BQC3 489 aaPredicted RBP4.77□□□□□ -1.65
TDP1-217ENST00000557782 NKX2-4Q9H2Z4 354 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 GP6Q9HCN6 339 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 PTPRHQ9HD43 1115 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 SWAP70Q9UH65 585 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 FBXO9Q9UK97 447 aaPredicted RBP4.77□□□□□ -1.65
TDP1-217ENST00000557782 ZBTB21Q9ULJ3 1066 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 TRAF6Q9Y4K3 522 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 PCDHGC5Q9Y5F6 944 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 PCDHA9Q9Y5H5 950 aa4.77□□□□□ -1.65
TDP1-217ENST00000557782 FRMPD2Q68DX3 1309 aaPredicted RBP4.76□□□□□ -1.65
TDP1-217ENST00000557782 A0A0G2JS52 829 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 FAM187AA6NFU0 413 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 MAFGO15525 162 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 GLRX3O76003 335 aaKnown RBP4.76□□□□□ -1.65
TDP1-217ENST00000557782 ITGA6P23229 1130 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 ADH6P28332 368 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 PPM1FP49593 454 aaPredicted RBP4.76□□□□□ -1.65
TDP1-217ENST00000557782 KPNA1P52294 538 aaPredicted RBP4.76□□□□□ -1.65
TDP1-217ENST00000557782 SESN3P58005 492 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 ERVK-21P61565 698 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 KRT85P78386 507 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 FOXD4Q12950 439 aaPredicted RBP4.76□□□□□ -1.65
TDP1-217ENST00000557782 AUHQ13825 339 aaKnown RBP4.76□□□□□ -1.65
TDP1-217ENST00000557782 GRM3Q14832 879 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 SUZ12Q15022 739 aaKnown RBP4.76□□□□□ -1.65
TDP1-217ENST00000557782 FAM83BQ5T0W9 1011 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 GPR158Q5T848 1215 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 NBPF12Q5TAG4 269 aaPredicted RBP4.76□□□□□ -1.65
TDP1-217ENST00000557782 PCGF5Q86SE9 256 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 CPXCR1Q8N123 301 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 ANKRD42Q8N9B4 389 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 TMEM145Q8NBT3 493 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 RNF214Q8ND24 703 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 BRF1Q92994 677 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 HSPBAP1Q96EW2 488 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 TNIP3Q96KP6 325 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 EMC7Q9NPA0 242 aa4.76□□□□□ -1.65
TDP1-217ENST00000557782 CYP26B1Q9NR63 512 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms