RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 MKL1Q969V6 931 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 RILPL2Q969X0 211 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 KCTD12Q96CX2 325 aaKnown RBP13.52□□□□□ -0.25
LINC00648-204ENST00000557749 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.52□□□□□ -0.25
LINC00648-204ENST00000557749 UNC93B1Q9H1C4 597 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 PORCNQ9H237 461 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 RNF41Q9H4P4 317 aaPredicted RBP13.52□□□□□ -0.25
LINC00648-204ENST00000557749 DIAPH3Q9NSV4 1193 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 ANAPC4Q9UJX5 808 aa13.52□□□□□ -0.25
LINC00648-204ENST00000557749 CTDP1Q9Y5B0 961 aaPredicted RBP13.52□□□□□ -0.25
LINC00648-204ENST00000557749 GREB1LQ9C091 1923 aaPredicted RBP13.52□□□□□ -0.25
LINC00648-204ENST00000557749 A0A0G2JMZ2 1700 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 CCDC171Q6TFL3 1326 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 TSPY2A6NKD2 308 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 RAD21O60216 631 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 CNMDO75829 334 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 FARP2O94887 1054 aaPredicted RBP13.51□□□□□ -0.25
LINC00648-204ENST00000557749 TFRCP02786 760 aaKnown RBP13.51□□□□□ -0.25
LINC00648-204ENST00000557749 Q3C1V9 767 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 SIAH1Q8IUQ4 282 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 PLEKHM2Q8IWE5 1019 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 USP6NLQ92738 828 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 WNT2BQ93097 391 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 SEC62Q99442 399 aaKnown RBP13.51□□□□□ -0.25
LINC00648-204ENST00000557749 SLF1Q9BQI6 1058 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 MTMR4Q9NYA4 1195 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 PPP1R9AQ9ULJ8 1098 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 CENPFP49454 3210 aa13.51□□□□□ -0.25
LINC00648-204ENST00000557749 ZNF236Q9UL36 1845 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 IGKV6D-41A0A0C4DH26 115 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 SOWAHBA6NEL2 793 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 F5H6K3 240 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 ORC4O43929 436 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 IGHDP01880 384 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 FCER1AP12319 257 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 KLRC3Q07444 240 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 PLS1Q14651 629 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 MAP3K21Q5TCX8 1036 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 DPP9Q86TI2 863 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 PRPF38AQ8NAV1 312 aaKnown RBP13.5□□□□□ -0.25
LINC00648-204ENST00000557749 TRIB2Q92519 343 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 CEP95Q96GE4 821 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 DEFB118Q96PH6 123 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 MOV10L1Q9BXT6 1211 aaKnown RBP13.5□□□□□ -0.25
LINC00648-204ENST00000557749 BTBD7Q9P203 1132 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 CLIP2Q9UDT6 1046 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 FEM1BQ9UK73 627 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 ADAMTS5Q9UNA0 930 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 NR2E3Q9Y5X4 410 aa13.5□□□□□ -0.25
LINC00648-204ENST00000557749 ZBED4O75132 1171 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 ERCC3P19447 782 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 OAZ1P54368 228 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 TFAP4Q01664 338 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 KCTD2Q14681 263 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 AMHR2Q16671 573 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 FAM83BQ5T0W9 1011 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 OLFML2BQ68BL8 750 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 THSD4Q6ZMP0 1018 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 NECAB2Q7Z6G3 386 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 NCAPG2Q86XI2 1143 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 RIOX2Q8IUF8 465 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 CLEC10AQ8IUN9 316 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 RNF166Q96A37 237 aaPredicted RBP13.49□□□□□ -0.25
LINC00648-204ENST00000557749 SHISA4Q96DD7 197 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 ATG4CQ96DT6 458 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.49□□□□□ -0.25
LINC00648-204ENST00000557749 TEX13BQ9BXU2 312 aa13.49□□□□□ -0.25
LINC00648-204ENST00000557749 VWA5AO00534 786 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 PRDM1O75626 825 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 NDUFB10O96000 172 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 HSPD1P10809 573 aaKnown RBP13.48□□□□□ -0.25
LINC00648-204ENST00000557749 SDSP20132 328 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 STAT3P40763 770 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 NMIQ13287 307 aaPredicted RBP13.48□□□□□ -0.25
LINC00648-204ENST00000557749 CCDC178Q5BJE1 867 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 RCSD1Q6JBY9 416 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 FAM160B2Q86V87 743 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 STK11IPQ8N1F8 1099 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 CHURC1Q8WUH1 139 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 RUFY2Q8WXA3 655 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 GMCL1Q96IK5 515 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 FBXO40Q9UH90 709 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 NRBP1Q9UHY1 535 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 CTNNA3Q9UI47 895 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 PNMA2Q9UL42 364 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 STX8Q9UNK0 236 aa13.48□□□□□ -0.25
LINC00648-204ENST00000557749 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.48□□□□□ -0.25
LINC00648-204ENST00000557749 RAD50Q92878 1312 aa13.47□□□□□ -0.25
LINC00648-204ENST00000557749 A0A0D9SFI3 127 aa13.47□□□□□ -0.25
LINC00648-204ENST00000557749 ATP2A1O14983 1001 aa13.47□□□□□ -0.25
LINC00648-204ENST00000557749 RANBP6O60518 1105 aaKnown RBP13.47□□□□□ -0.25
LINC00648-204ENST00000557749 FGAP02671 866 aa13.47□□□□□ -0.25
LINC00648-204ENST00000557749 FGRP09769 529 aa13.47□□□□□ -0.25
LINC00648-204ENST00000557749 BMP3P12645 472 aa13.47□□□□□ -0.25
LINC00648-204ENST00000557749 ADORA2AP29274 412 aa13.47□□□□□ -0.25
LINC00648-204ENST00000557749 STAT2P52630 851 aa13.47□□□□□ -0.25
LINC00648-204ENST00000557749 SLFN13Q68D06 897 aa13.47□□□□□ -0.25
LINC00648-204ENST00000557749 CCDC129Q6ZRS4 1044 aa13.47□□□□□ -0.25
LINC00648-204ENST00000557749 FAM227BQ96M60 508 aa13.47□□□□□ -0.25
LINC00648-204ENST00000557749 TOMM22Q9NS69 142 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms