RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 P2RX7Q99572 595 aaKnown RBP10.59□□□□□ -0.71
CHD8-214ENST00000557727 LRRC2Q9BYS8 371 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 BACH2Q9BYV9 841 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 TM6SF1Q9BZW5 370 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 GOPCQ9HD26 462 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 TXNRD2Q9NNW7 524 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 FBXO28Q9NVF7 368 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 TMOD4Q9NZQ9 345 aa10.59□□□□□ -0.71
CHD8-214ENST00000557727 USP17L15C9J2P7 530 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 USP17L13C9JLJ4 530 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 USP17L11C9JVI0 530 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 USP17L18D6R9N7 530 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 USP17L22D6RA61 530 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 USP17L17D6RBQ6 530 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 USP17L19D6RCP7 530 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 USP17L20D6RJB6 530 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 TLR2O60603 784 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 CTGFP29279 349 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 RBM25P49756 843 aaKnown RBP10.58□□□□□ -0.72
CHD8-214ENST00000557727 ANAPC15P60006 121 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 USP17L24Q0WX57 530 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 KRT32Q14532 448 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 TAF1CQ15572 869 aaPredicted RBP10.58□□□□□ -0.72
CHD8-214ENST00000557727 SGMS1Q86VZ5 419 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 PNMA1Q8ND90 353 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 REPS2Q8NFH8 660 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 TATDN2Q93075 761 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 JAKMIP1Q96N16 626 aaKnown RBP10.58□□□□□ -0.72
CHD8-214ENST00000557727 UBAC1Q9BSL1 405 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 RBM27Q9P2N5 1060 aaKnown RBP10.58□□□□□ -0.72
CHD8-214ENST00000557727 ZNF236Q9UL36 1845 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 MYPNQ86TC9 1320 aa10.58□□□□□ -0.72
CHD8-214ENST00000557727 RBBP6Q7Z6E9 1792 aaKnown RBP10.57□□□□□ -0.72
CHD8-214ENST00000557727 SMAPO00193 183 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 IFIT3O14879 490 aaKnown RBP10.57□□□□□ -0.72
CHD8-214ENST00000557727 CASTP20810 708 aaKnown RBP10.57□□□□□ -0.72
CHD8-214ENST00000557727 OSBPP22059 807 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 RPS6KB1P23443 525 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 MCCP23508 829 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 LIFRP42702 1097 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 HERVK_113P62684 666 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 ZNF543Q08ER8 600 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 TOB2Q14106 344 aaPredicted RBP10.57□□□□□ -0.72
CHD8-214ENST00000557727 CCDC178Q5BJE1 867 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 TMEM67Q5HYA8 995 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 OTUD7BQ6GQQ9 843 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 TTBK2Q6IQ55 1244 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 BTNL9Q6UXG8 535 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 DCAF4Q8WV16 495 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 TMEM87BQ96K49 555 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 PARK7Q99497 189 aaKnown RBP10.57□□□□□ -0.72
CHD8-214ENST00000557727 BTBD7Q9P203 1132 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 RBPJLQ9UBG7 517 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 MORF4L1Q9UBU8 362 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 BRPF3Q9ULD4 1205 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 PPP1R9AQ9ULJ8 1098 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 PLXNA1Q9UIW2 1896 aa10.57□□□□□ -0.72
CHD8-214ENST00000557727 NID2Q14112 1375 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 PALM3A6NDB9 673 aaPredicted RBP10.56□□□□□ -0.72
CHD8-214ENST00000557727 GPR25O00155 361 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 PLA2G6O60733 806 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 BMP3P12645 472 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 EVCP57679 992 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 COG2Q14746 738 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 WTAPQ15007 396 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 TJAP1Q5JTD0 557 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 IFIT1BQ5T764 474 aaKnown RBP10.56□□□□□ -0.72
CHD8-214ENST00000557727 BLOC1S2Q6QNY1 142 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 KCTD1Q719H9 257 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 RUFY3Q7L099 469 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 STAG2Q8N3U4 1231 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 CHMP4CQ96CF2 233 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 ATG4CQ96DT6 458 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 UPF3BQ9BZI7 483 aaKnown RBP10.56□□□□□ -0.72
CHD8-214ENST00000557727 TANGO6Q9C0B7 1094 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 ZFYVE28Q9HCC9 887 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 CPA4Q9UI42 421 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 MAD2L2Q9UI95 211 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 PNMA3Q9UL41 463 aa10.56□□□□□ -0.72
CHD8-214ENST00000557727 C3orf80F5H4A9 247 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 FLOT1O75955 427 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 HMGB1P09429 215 aaKnown RBP10.55□□□□□ -0.72
CHD8-214ENST00000557727 SLC1A4P43007 532 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 IRX3P78415 501 aaPredicted RBP10.55□□□□□ -0.72
CHD8-214ENST00000557727 PABPC4Q13310 644 aaKnown RBP eCLIP10.55□□□□□ -0.728e-7■■■■□ 23.2
CHD8-214ENST00000557727 GRM4Q14833 912 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 FAM110CQ1W6H9 321 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 Q3C1V9 767 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 APOA5Q6Q788 366 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 NBPF11Q86T75 865 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 ZNF654Q8IZM8 581 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 ANKRD13CQ8N6S4 541 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 ZNF296Q8WUU4 475 aaPredicted RBP10.55□□□□□ -0.72
CHD8-214ENST00000557727 TBC1D32Q96NH3 1257 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 SLF1Q9BQI6 1058 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 MYL10Q9BUA6 226 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 CPVLQ9H3G5 476 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 KAT14Q9H8E8 782 aa10.55□□□□□ -0.72
CHD8-214ENST00000557727 FAM217BQ9NTX9 383 aaPredicted RBP10.55□□□□□ -0.72
CHD8-214ENST00000557727 ZNF214Q9UL59 606 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms