RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 TET1Q8NFU7 2136 aa12.21□□□□□ -0.45
ABCD4-227ENST00000557554 SLC9A7Q96T83 725 aa12.21□□□□□ -0.45
ABCD4-227ENST00000557554 SUGCTQ9HAC7 445 aa12.21□□□□□ -0.45
ABCD4-227ENST00000557554 HDAC5Q9UQL6 1122 aa12.21□□□□□ -0.45
ABCD4-227ENST00000557554 GNEQ9Y223 722 aaKnown RBP12.21□□□□□ -0.45
ABCD4-227ENST00000557554 COL4A4P53420 1690 aaPredicted RBP12.21□□□□□ -0.45
ABCD4-227ENST00000557554 ZFHX2Q9C0A1 2572 aaPredicted RBP12.21□□□□□ -0.46
ABCD4-227ENST00000557554 PTPRSQ13332 1948 aa12.2□□□□□ -0.46
ABCD4-227ENST00000557554 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.2□□□□□ -0.46
ABCD4-227ENST00000557554 MPHOSPH10O00566 681 aaKnown RBP12.2□□□□□ -0.46
ABCD4-227ENST00000557554 KCNA5P22460 613 aa12.2□□□□□ -0.46
ABCD4-227ENST00000557554 COPB2P35606 906 aa12.2□□□□□ -0.46
ABCD4-227ENST00000557554 ZAP70P43403 619 aa12.2□□□□□ -0.46
ABCD4-227ENST00000557554 IER5LQ5T953 404 aa12.2□□□□□ -0.46
ABCD4-227ENST00000557554 TMEM179Q6ZVK1 233 aa12.2□□□□□ -0.46
ABCD4-227ENST00000557554 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.2□□□□□ -0.46
ABCD4-227ENST00000557554 DEFB128Q7Z7B8 93 aa12.2□□□□□ -0.46
ABCD4-227ENST00000557554 CLEC10AQ8IUN9 316 aa12.2□□□□□ -0.46
ABCD4-227ENST00000557554 NEK9Q8TD19 979 aa12.2□□□□□ -0.46
ABCD4-227ENST00000557554 MFSD14AQ96MC6 490 aa12.2□□□□□ -0.46
ABCD4-227ENST00000557554 MEIS3Q99687 375 aa12.2□□□□□ -0.46
ABCD4-227ENST00000557554 PPP1R9AQ9ULJ8 1098 aa12.2□□□□□ -0.46
ABCD4-227ENST00000557554 TECTAO75443 2155 aa12.2□□□□□ -0.46
ABCD4-227ENST00000557554 C5orf42Q9H799 3197 aa12.19□□□□□ -0.46
ABCD4-227ENST00000557554 LCHNA4D1U4 455 aa12.19□□□□□ -0.46
ABCD4-227ENST00000557554 KIF28PB7ZC32 967 aa12.19□□□□□ -0.46
ABCD4-227ENST00000557554 FAM9BQ8IZU0 186 aa12.19□□□□□ -0.46
ABCD4-227ENST00000557554 DDX11Q96FC9 970 aa12.19□□□□□ -0.46
ABCD4-227ENST00000557554 RIOK1Q9BRS2 568 aaKnown RBP12.19□□□□□ -0.46
ABCD4-227ENST00000557554 ALDH8A1Q9H2A2 487 aaPredicted RBP12.19□□□□□ -0.46
ABCD4-227ENST00000557554 ALG13Q9NP73 1137 aaKnown RBP12.19□□□□□ -0.46
ABCD4-227ENST00000557554 DCHS1Q96JQ0 3298 aa12.19□□□□□ -0.46
ABCD4-227ENST00000557554 PTPRZ1P23471 2315 aaPredicted RBP12.19□□□□□ -0.46
ABCD4-227ENST00000557554 CYP2C9P11712 490 aa12.18□□□□□ -0.46
ABCD4-227ENST00000557554 PTGS1P23219 599 aa12.18□□□□□ -0.46
ABCD4-227ENST00000557554 PSMC6P62333 389 aa12.18□□□□□ -0.46
ABCD4-227ENST00000557554 TNFAIP2Q03169 654 aa12.18□□□□□ -0.46
ABCD4-227ENST00000557554 ZP2Q05996 745 aa12.18□□□□□ -0.46
ABCD4-227ENST00000557554 PUS10Q3MIT2 529 aaKnown RBP12.18□□□□□ -0.46
ABCD4-227ENST00000557554 ARMCX2Q7L311 632 aa12.18□□□□□ -0.46
ABCD4-227ENST00000557554 CCDC144CPQ8IYA2 1237 aa12.18□□□□□ -0.46
ABCD4-227ENST00000557554 GDPD5Q8WTR4 605 aa12.18□□□□□ -0.46
ABCD4-227ENST00000557554 DBNDD2Q9BQY9 259 aa12.18□□□□□ -0.46
ABCD4-227ENST00000557554 ARHGEF10LQ9HCE6 1279 aa12.18□□□□□ -0.46
ABCD4-227ENST00000557554 GPR108Q9NPR9 543 aa12.18□□□□□ -0.46
ABCD4-227ENST00000557554 ATP2A1O14983 1001 aa12.17□□□□□ -0.46
ABCD4-227ENST00000557554 POLR3DP05423 398 aaPredicted RBP12.17□□□□□ -0.46
ABCD4-227ENST00000557554 IQCF3P0C7M6 154 aa12.17□□□□□ -0.46
ABCD4-227ENST00000557554 ACTN1P12814 892 aa12.17□□□□□ -0.46
ABCD4-227ENST00000557554 TCF15Q12870 199 aa12.17□□□□□ -0.46
ABCD4-227ENST00000557554 FSCN1Q16658 493 aaKnown RBP12.17□□□□□ -0.46
ABCD4-227ENST00000557554 CCDC158Q5M9N0 1113 aa12.17□□□□□ -0.46
ABCD4-227ENST00000557554 TTC39AQ5SRH9 613 aa12.17□□□□□ -0.46
ABCD4-227ENST00000557554 BMP8AQ7Z5Y6 402 aa12.17□□□□□ -0.46
ABCD4-227ENST00000557554 TEX13BQ9BXU2 312 aa12.17□□□□□ -0.46
ABCD4-227ENST00000557554 TRMT13Q9NUP7 481 aaKnown RBP12.17□□□□□ -0.46
ABCD4-227ENST00000557554 PRKAG3Q9UGI9 489 aa12.17□□□□□ -0.46
ABCD4-227ENST00000557554 EEF2P13639 858 aaKnown RBP12.16□□□□□ -0.46
ABCD4-227ENST00000557554 AKR1B1P15121 316 aa12.16□□□□□ -0.46
ABCD4-227ENST00000557554 SMPD1P17405 629 aa12.16□□□□□ -0.46
ABCD4-227ENST00000557554 RFC2P35250 354 aa12.16□□□□□ -0.46
ABCD4-227ENST00000557554 ERVK-21P61565 698 aa12.16□□□□□ -0.46
ABCD4-227ENST00000557554 COL19A1Q14993 1142 aa12.16□□□□□ -0.46
ABCD4-227ENST00000557554 TMEM63BQ5T3F8 832 aa12.16□□□□□ -0.46
ABCD4-227ENST00000557554 SNRNP48Q6IEG0 339 aaKnown RBP12.16□□□□□ -0.46
ABCD4-227ENST00000557554 CACNA1HO95180 2353 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 ZNF536O15090 1300 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 ANP32CO43423 234 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 IDH1O75874 414 aaKnown RBP12.15□□□□□ -0.46
ABCD4-227ENST00000557554 SUPT20HL2P0C7V6 817 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 IRS1P35568 1242 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 PTPN5P54829 565 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 CNTN2Q02246 1040 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 ICA1Q05084 483 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 GPNMBQ14956 572 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 ALDH1L2Q3SY69 923 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 TNNI3KQ59H18 835 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 HERC4Q5GLZ8 1057 aaPredicted RBP12.15□□□□□ -0.46
ABCD4-227ENST00000557554 TMED8Q6PL24 325 aaPredicted RBP12.15□□□□□ -0.46
ABCD4-227ENST00000557554 TMCO2Q7Z6W1 182 aaPredicted RBP12.15□□□□□ -0.46
ABCD4-227ENST00000557554 TLK2Q86UE8 772 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 DYNLL2Q96FJ2 89 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 SH2D4AQ9H788 454 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 MCM9Q9NXL9 1143 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 Q9Y3F1 56 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 FPGT-TNNI3KV9GXZ4 949 aa12.15□□□□□ -0.46
ABCD4-227ENST00000557554 MYO15AQ9UKN7 3530 aa12.15□□□□□ -0.47
ABCD4-227ENST00000557554 TNKSO95271 1327 aa12.14□□□□□ -0.47
ABCD4-227ENST00000557554 PNMA6EA0A0J9YXQ4 647 aa12.14□□□□□ -0.47
ABCD4-227ENST00000557554 H3BQ06 376 aaPredicted RBP12.14□□□□□ -0.47
ABCD4-227ENST00000557554 PITPNM1O00562 1244 aa12.14□□□□□ -0.47
ABCD4-227ENST00000557554 DYNC1LI2O43237 492 aaPredicted RBP12.14□□□□□ -0.47
ABCD4-227ENST00000557554 GFRA3O60609 400 aa12.14□□□□□ -0.47
ABCD4-227ENST00000557554 BAIAP3O94812 1187 aa12.14□□□□□ -0.47
ABCD4-227ENST00000557554 CYP2D6P10635 497 aa12.14□□□□□ -0.47
ABCD4-227ENST00000557554 G3BP1Q13283 466 aaKnown RBP eCLIP12.14□□□□□ -0.47
ABCD4-227ENST00000557554 FAM83BQ5T0W9 1011 aa12.14□□□□□ -0.47
ABCD4-227ENST00000557554 TAPT1Q6NXT6 567 aa12.14□□□□□ -0.47
ABCD4-227ENST00000557554 ADHFE1Q8IWW8 467 aa12.14□□□□□ -0.47
ABCD4-227ENST00000557554 FAM133AQ8N9E0 248 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms