RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 TSEN34Q9BSV6 310 aaKnown RBP16.81■□□□□ 0.28
SLIRP-210ENST00000557431 SLC38A10Q9HBR0 1119 aa16.81■□□□□ 0.28
SLIRP-210ENST00000557431 TBX21Q9UL17 535 aa16.81■□□□□ 0.28
SLIRP-210ENST00000557431 DUSP11O75319 330 aaKnown RBP16.8■□□□□ 0.28
SLIRP-210ENST00000557431 DNAJB2P25686 324 aa16.8■□□□□ 0.28
SLIRP-210ENST00000557431 PBX2P40425 430 aa16.8■□□□□ 0.28
SLIRP-210ENST00000557431 SLFN13Q68D06 897 aa16.8■□□□□ 0.28
SLIRP-210ENST00000557431 ANKRD33Q7Z3H0 272 aa16.8■□□□□ 0.28
SLIRP-210ENST00000557431 CCDC144CPQ8IYA2 1237 aa16.8■□□□□ 0.28
SLIRP-210ENST00000557431 NUP133Q8WUM0 1156 aa16.8■□□□□ 0.28
SLIRP-210ENST00000557431 KATNBL1Q9H079 304 aa16.8■□□□□ 0.28
SLIRP-210ENST00000557431 INCENPQ9NQS7 918 aa16.8■□□□□ 0.28
SLIRP-210ENST00000557431 PRDM6Q9NQX0 595 aa16.8■□□□□ 0.28
SLIRP-210ENST00000557431 MTMR4Q9NYA4 1195 aa16.8■□□□□ 0.28
SLIRP-210ENST00000557431 MTMR7Q9Y216 660 aa16.8■□□□□ 0.28
SLIRP-210ENST00000557431 ASTN1O14525 1302 aa16.79■□□□□ 0.28
SLIRP-210ENST00000557431 MOXD2PA6NHM9 499 aa16.79■□□□□ 0.28
SLIRP-210ENST00000557431 TMEM232C9JQI7 657 aa16.79■□□□□ 0.28
SLIRP-210ENST00000557431 ATP2A1O14983 1001 aa16.79■□□□□ 0.28
SLIRP-210ENST00000557431 CTAGE5O15320 804 aa16.79■□□□□ 0.28
SLIRP-210ENST00000557431 BMP3P12645 472 aa16.79■□□□□ 0.28
SLIRP-210ENST00000557431 TMEM63BQ5T3F8 832 aa16.79■□□□□ 0.28
SLIRP-210ENST00000557431 GIMAP6Q6P9H5 292 aa16.79■□□□□ 0.28
SLIRP-210ENST00000557431 CCDC129Q6ZRS4 1044 aa16.79■□□□□ 0.28
SLIRP-210ENST00000557431 C16orf59Q7L2K0 433 aa16.79■□□□□ 0.28
SLIRP-210ENST00000557431 AGBL1Q96MI9 1066 aa16.79■□□□□ 0.28
SLIRP-210ENST00000557431 GLT1D1Q96MS3 346 aa16.79■□□□□ 0.28
SLIRP-210ENST00000557431 FEM1BQ9UK73 627 aa16.79■□□□□ 0.28
SLIRP-210ENST00000557431 ZNF536O15090 1300 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 TTLL1O95922 423 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 TIMP1P01033 207 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 TSPY3P0CV98 308 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 TSPY8P0CW00 308 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 CSF2RAP15509 400 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 CTDSPL2Q05D32 466 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 IKQ13123 557 aaPredicted RBP16.78■□□□□ 0.28
SLIRP-210ENST00000557431 CCDC174Q6PII3 467 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 KCTD1Q719H9 257 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 MSL3Q8N5Y2 521 aaKnown RBP16.78■□□□□ 0.28
SLIRP-210ENST00000557431 PPM1EQ8WY54 764 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 MKL1Q969V6 931 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 TOX2Q96NM4 488 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 UPF3AQ9H1J1 476 aaKnown RBP16.78■□□□□ 0.28
SLIRP-210ENST00000557431 ABHD16BQ9H3Z7 469 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 CHMP4BQ9H444 224 aaKnown RBP16.78■□□□□ 0.28
SLIRP-210ENST00000557431 DCTPP1Q9H773 170 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 RNF146Q9NTX7 359 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 PTPRSQ13332 1948 aa16.78■□□□□ 0.28
SLIRP-210ENST00000557431 PLIN4Q96Q06 1357 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 UMODL1Q5DID0 1318 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.77■□□□□ 0.28
SLIRP-210ENST00000557431 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.77■□□□□ 0.28
SLIRP-210ENST00000557431 SOWAHBA6NEL2 793 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 PATL2C9JE40 543 aaKnown RBP16.77■□□□□ 0.28
SLIRP-210ENST00000557431 NMT2O60551 498 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 CST5P28325 142 aaPredicted RBP16.77■□□□□ 0.28
SLIRP-210ENST00000557431 CYP2C18P33260 490 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 CDK7P50613 346 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 GJA9P57773 515 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 TFAP4Q01664 338 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 GNASQ5JWF2 1037 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 TMEM240Q5SV17 173 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 MFSD5Q6N075 450 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 EEPD1Q7L9B9 569 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 ZNF467Q7Z7K2 595 aaPredicted RBP16.77■□□□□ 0.28
SLIRP-210ENST00000557431 CHST13Q8NET6 341 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 NEDD1Q8NHV4 660 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 GPATCH3Q96I76 525 aa16.77■□□□□ 0.28
SLIRP-210ENST00000557431 PURBQ96QR8 312 aaKnown RBP16.77■□□□□ 0.28
SLIRP-210ENST00000557431 A1CFQ9NQ94 594 aaKnown RBP16.77■□□□□ 0.28
SLIRP-210ENST00000557431 TET1Q8NFU7 2136 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 A0A0U1RQG5 324 aaPredicted RBP16.76■□□□□ 0.27
SLIRP-210ENST00000557431 ARVCFO00192 962 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 ALAS1P13196 640 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 MCCP23508 829 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 PPARAQ07869 468 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 MUM1L1Q5H9M0 696 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 CXCL17Q6UXB2 119 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 NOL8Q76FK4 1167 aaKnown RBP16.76■□□□□ 0.27
SLIRP-210ENST00000557431 FAM126BQ8IXS8 530 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 FAM133AQ8N9E0 248 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 GMCL1P1Q8NEA9 526 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 PI4K2BQ8TCG2 481 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 TIFAQ96CG3 184 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 FSD1Q9BTV5 496 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 NAPBQ9H115 298 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 ZNF576Q9H609 170 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 ACAD9Q9H845 621 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 PDGFCQ9NRA1 345 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 MYH7BA7E2Y1 1941 aa16.76■□□□□ 0.27
SLIRP-210ENST00000557431 ELP1O95163 1332 aa16.75■□□□□ 0.27
SLIRP-210ENST00000557431 FOXP2O15409 715 aa16.75■□□□□ 0.27
SLIRP-210ENST00000557431 ZFYP08048 801 aaPredicted RBP16.75■□□□□ 0.27
SLIRP-210ENST00000557431 GNAT2P19087 354 aa16.75■□□□□ 0.27
SLIRP-210ENST00000557431 STAT2P52630 851 aa16.75■□□□□ 0.27
SLIRP-210ENST00000557431 ZNF365Q70YC5 407 aa16.75■□□□□ 0.27
SLIRP-210ENST00000557431 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.75■□□□□ 0.27
SLIRP-210ENST00000557431 FBXO16Q8IX29 292 aaPredicted RBP16.75■□□□□ 0.27
SLIRP-210ENST00000557431 PCSK9Q8NBP7 692 aaKnown RBP16.75■□□□□ 0.27
SLIRP-210ENST00000557431 TRERF1Q96PN7 1200 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms