RNA–Protein interactions for RNA: ENST00000557422.1

RTN1-208, Transcript of reticulon 1, humanhuman

TSL 3

Gene RTN1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-208ENST00000557422 FGD4Q96M96 766 aa14.65□□□□□ -0.06
RTN1-208ENST00000557422 C1QTNF1Q9BXJ1 281 aa14.65□□□□□ -0.06
RTN1-208ENST00000557422 HOXD11P31277 338 aaPredicted RBP14.64□□□□□ -0.07
RTN1-208ENST00000557422 RABGGTBP53611 331 aa14.64□□□□□ -0.07
RTN1-208ENST00000557422 TFF2Q03403 129 aa14.64□□□□□ -0.07
RTN1-208ENST00000557422 FTSJ3Q8IY81 847 aaKnown RBP14.64□□□□□ -0.07
RTN1-208ENST00000557422 CPXCR1Q8N123 301 aa14.64□□□□□ -0.07
RTN1-208ENST00000557422 PRPF38AQ8NAV1 312 aaKnown RBP14.64□□□□□ -0.07
RTN1-208ENST00000557422 KATNBL1Q9H079 304 aa14.64□□□□□ -0.07
RTN1-208ENST00000557422 HIPK3Q9H422 1215 aa14.64□□□□□ -0.07
RTN1-208ENST00000557422 UMODL1Q5DID0 1318 aa14.64□□□□□ -0.07
RTN1-208ENST00000557422 F5H6K3 240 aa14.63□□□□□ -0.07
RTN1-208ENST00000557422 ZBED4O75132 1171 aa14.63□□□□□ -0.07
RTN1-208ENST00000557422 NDUFB10O96000 172 aa14.63□□□□□ -0.07
RTN1-208ENST00000557422 BEX3Q00994 111 aa14.63□□□□□ -0.07
RTN1-208ENST00000557422 KLRC3Q07444 240 aa14.63□□□□□ -0.07
RTN1-208ENST00000557422 HSP90AB4PQ58FF6 505 aa14.63□□□□□ -0.07
RTN1-208ENST00000557422 CTR9Q6PD62 1173 aa14.63□□□□□ -0.07
RTN1-208ENST00000557422 CXCL17Q6UXB2 119 aa14.63□□□□□ -0.07
RTN1-208ENST00000557422 ARMCX2Q7L311 632 aa14.63□□□□□ -0.07
RTN1-208ENST00000557422 ANKRD35Q8N283 1001 aa14.63□□□□□ -0.07
RTN1-208ENST00000557422 MICALL1Q8N3F8 863 aa14.63□□□□□ -0.07
RTN1-208ENST00000557422 RAVER2Q9HCJ3 691 aaKnown RBP14.63□□□□□ -0.07
RTN1-208ENST00000557422 REV3LO60673 3130 aa14.63□□□□□ -0.07
RTN1-208ENST00000557422 CHGBP05060 677 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 MYOGP15173 224 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 KCNQ1P51787 676 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 CCL23P55773 120 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 AAK1Q2M2I8 961 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 PPP2R2DQ66LE6 453 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 CCDC144CPQ8IYA2 1237 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 CLASRPQ8N2M8 674 aaKnown RBP14.62□□□□□ -0.07
RTN1-208ENST00000557422 DDRGK1Q96HY6 314 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 NOC4LQ9BVI4 516 aaKnown RBP14.62□□□□□ -0.07
RTN1-208ENST00000557422 PAG1Q9NWQ8 432 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 NYAP2Q9P242 653 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 PCDHA11Q9Y5I1 949 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 SLC4A7Q9Y6M7 1214 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 SLC4A4Q9Y6R1 1079 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 ASTN1O14525 1302 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 GRIN2DO15399 1336 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 ZBED9Q6R2W3 1325 aa14.62□□□□□ -0.07
RTN1-208ENST00000557422 PRRC2BQ5JSZ5 2229 aaKnown RBP14.61□□□□□ -0.07
RTN1-208ENST00000557422 GREB1LQ9C091 1923 aaPredicted RBP14.61□□□□□ -0.07
RTN1-208ENST00000557422 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.61□□□□□ -0.07
RTN1-208ENST00000557422 ERC2O15083 957 aa14.61□□□□□ -0.07
RTN1-208ENST00000557422 CABYRO75952 493 aa14.61□□□□□ -0.07
RTN1-208ENST00000557422 IFIT2P09913 472 aaKnown RBP14.61□□□□□ -0.07
RTN1-208ENST00000557422 RASA1P20936 1047 aa14.61□□□□□ -0.07
RTN1-208ENST00000557422 TNFAIP2Q03169 654 aa14.61□□□□□ -0.07
RTN1-208ENST00000557422 CHST13Q8NET6 341 aa14.61□□□□□ -0.07
RTN1-208ENST00000557422 KIFC2Q96AC6 838 aa14.61□□□□□ -0.07
RTN1-208ENST00000557422 VWCEQ96DN2 955 aa14.61□□□□□ -0.07
RTN1-208ENST00000557422 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.61□□□□□ -0.07
RTN1-208ENST00000557422 TRPV6Q9H1D0 765 aa14.61□□□□□ -0.07
RTN1-208ENST00000557422 SLC38A10Q9HBR0 1119 aa14.61□□□□□ -0.07
RTN1-208ENST00000557422 FBXO40Q9UH90 709 aa14.61□□□□□ -0.07
RTN1-208ENST00000557422 CTDP1Q9Y5B0 961 aaPredicted RBP14.61□□□□□ -0.07
RTN1-208ENST00000557422 TRANK1O15050 2925 aa14.6□□□□□ -0.07
RTN1-208ENST00000557422 POU3F3P20264 500 aaPredicted RBP14.6□□□□□ -0.07
RTN1-208ENST00000557422 CNTN2Q02246 1040 aa14.6□□□□□ -0.07
RTN1-208ENST00000557422 ITGA7Q13683 1181 aa14.6□□□□□ -0.07
RTN1-208ENST00000557422 SKIV2LQ15477 1246 aaKnown RBP14.6□□□□□ -0.07
RTN1-208ENST00000557422 FSCN1Q16658 493 aaKnown RBP14.6□□□□□ -0.07
RTN1-208ENST00000557422 NOL8Q76FK4 1167 aaKnown RBP14.6□□□□□ -0.07
RTN1-208ENST00000557422 RPUSD2Q8IZ73 545 aaKnown RBP14.6□□□□□ -0.07
RTN1-208ENST00000557422 KIF1BPQ96EK5 621 aa14.6□□□□□ -0.07
RTN1-208ENST00000557422 WNT8AQ9H1J5 351 aa14.6□□□□□ -0.07
RTN1-208ENST00000557422 BOLA2Q9H3K6 86 aa14.6□□□□□ -0.07
RTN1-208ENST00000557422 EPHX3Q9H6B9 360 aa14.6□□□□□ -0.07
RTN1-208ENST00000557422 CLIP2Q9UDT6 1046 aa14.6□□□□□ -0.07
RTN1-208ENST00000557422 GNEQ9Y223 722 aaKnown RBP14.6□□□□□ -0.07
RTN1-208ENST00000557422 ARIH1Q9Y4X5 557 aaPredicted RBP14.6□□□□□ -0.07
RTN1-208ENST00000557422 B4GALT4O60513 344 aa14.59□□□□□ -0.07
RTN1-208ENST00000557422 ATP2A2P16615 1042 aaKnown RBP14.59□□□□□ -0.07
RTN1-208ENST00000557422 ATP5JP18859 108 aa14.59□□□□□ -0.07
RTN1-208ENST00000557422 UBE3CQ15386 1083 aa14.59□□□□□ -0.07
RTN1-208ENST00000557422 FAM133AQ8N9E0 248 aa14.59□□□□□ -0.07
RTN1-208ENST00000557422 LRFN3Q9BTN0 628 aa14.59□□□□□ -0.07
RTN1-208ENST00000557422 SEZ6LQ9BYH1 1024 aa14.59□□□□□ -0.07
RTN1-208ENST00000557422 AP5M1Q9H0R1 490 aa14.59□□□□□ -0.07
RTN1-208ENST00000557422 BCL11AQ9H165 835 aa14.59□□□□□ -0.07
RTN1-208ENST00000557422 ARPP21Q9UBL0 812 aaPredicted RBP14.59□□□□□ -0.07
RTN1-208ENST00000557422 MTCH2Q9Y6C9 303 aa14.59□□□□□ -0.07
RTN1-208ENST00000557422 XIRP2A4UGR9 3374 aa14.59□□□□□ -0.07
RTN1-208ENST00000557422 SOWAHBA6NEL2 793 aa14.58□□□□□ -0.08
RTN1-208ENST00000557422 RFXAPO00287 272 aa14.58□□□□□ -0.08
RTN1-208ENST00000557422 PTGS1P23219 599 aa14.58□□□□□ -0.08
RTN1-208ENST00000557422 OAZ1P54368 228 aa14.58□□□□□ -0.08
RTN1-208ENST00000557422 SBK1Q52WX2 424 aa14.58□□□□□ -0.08
RTN1-208ENST00000557422 TLK2Q86UE8 772 aa14.58□□□□□ -0.08
RTN1-208ENST00000557422 STK11IPQ8N1F8 1099 aa14.58□□□□□ -0.08
RTN1-208ENST00000557422 SCLYQ96I15 445 aa14.58□□□□□ -0.08
RTN1-208ENST00000557422 AGBL1Q96MI9 1066 aa14.58□□□□□ -0.08
RTN1-208ENST00000557422 HAUS7Q99871 368 aa14.58□□□□□ -0.08
RTN1-208ENST00000557422 PUS7LQ9H0K6 701 aaKnown RBP14.58□□□□□ -0.08
RTN1-208ENST00000557422 MKNK2Q9HBH9 465 aa14.58□□□□□ -0.08
RTN1-208ENST00000557422 HOMER2Q9NSB8 354 aa14.58□□□□□ -0.08
RTN1-208ENST00000557422 FEM1BQ9UK73 627 aa14.58□□□□□ -0.08
RTN1-208ENST00000557422 IGKV6D-41A0A0C4DH26 115 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms