RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 CIITAP33076 1130 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 MAN1A1P33908 653 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 STX17P56962 302 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 LMNB2Q03252 620 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 GPBP1Q86WP2 473 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 NDUFAF2Q8N183 169 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 BBOF1Q8ND07 529 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 FAM167AQ96KS9 214 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 COPRSQ9NQ92 184 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 PDE6CP51160 858 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 KLHL30Q0D2K2 578 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 MYO1EQ12965 1108 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 ARHGEF25Q86VW2 580 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 SEPT12Q8IYM1 358 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 PPP1R9BQ96SB3 815 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 IFNKQ9P0W0 207 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 LCMT1Q9UIC8 334 aa9.2□□□□□ -0.94
CHD8-213ENST00000557364 MAP3K4Q9Y6R4 1608 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 ECM2O94769 699 aaPredicted RBP9.19□□□□□ -0.94
CHD8-213ENST00000557364 PPP1R21Q6ZMI0 780 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 AFG3L2Q9Y4W6 797 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 USP6P35125 1406 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 LTKP29376 864 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 PRR16Q569H4 304 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 CPLX4Q7Z7G2 160 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 NAPGQ99747 312 aaPredicted RBP9.19□□□□□ -0.94
CHD8-213ENST00000557364 VCXQ9H320 206 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 ARMCX3Q9UH62 379 aaPredicted RBP9.19□□□□□ -0.94
CHD8-213ENST00000557364 PTCH1Q13635 1447 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 E7EWF7 191 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 GRIN3BO60391 1043 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 RNF8O76064 485 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 CFAP221Q4G0U5 840 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 EP400NLQ6ZTU2 488 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 RSAD2Q8WXG1 361 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.19□□□□□ -0.94
CHD8-213ENST00000557364 ESYT2A0FGR8 921 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 TMEM232C9JQI7 657 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 K7ENM7 598 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 PRDM1O75626 825 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 CCDC121Q6ZUS5 278 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 KRT222Q8N1A0 295 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 RNF169Q8NCN4 708 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 GTF3C2Q8WUA4 911 aaPredicted RBP9.19□□□□□ -0.94
CHD8-213ENST00000557364 TMEM206Q9H813 350 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 PPANQ9NQ55 473 aaKnown RBP9.19□□□□□ -0.94
CHD8-213ENST00000557364 HEXIM1O94992 359 aaKnown RBP9.19□□□□□ -0.94
CHD8-213ENST00000557364 PPARGP37231 505 aaPredicted RBP9.19□□□□□ -0.94
CHD8-213ENST00000557364 KRT40Q6A162 431 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 C1orf228Q6PIY5 440 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 SECISBP2LQ93073 1101 aaKnown RBP9.19□□□□□ -0.94
CHD8-213ENST00000557364 RIC8AQ9NPQ8 531 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 TYW1Q9NV66 732 aaKnown RBP9.19□□□□□ -0.94
CHD8-213ENST00000557364 RAB20Q9NX57 234 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 MAGI3Q5TCQ9 1506 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 MED7O43513 233 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 ZNF189O75820 626 aaPredicted RBP9.19□□□□□ -0.94
CHD8-213ENST00000557364 GOLGA8FQ08AF8 430 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 GOLGA8DPQ0D2H9 430 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 SSH3Q8TE77 659 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 SELENOSQ9BQE4 189 aa9.19□□□□□ -0.94
CHD8-213ENST00000557364 GRAPQ13588 217 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 CDC37Q16543 378 aaPredicted RBP9.18□□□□□ -0.94
CHD8-213ENST00000557364 C8orf74Q6P047 294 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 HDXQ7Z353 690 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 ELMOD1Q8N336 334 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 FANCBQ8NB91 859 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 GRAPLQ8TC17 118 aaPredicted RBP9.18□□□□□ -0.94
CHD8-213ENST00000557364 GTF3C6Q969F1 213 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 MMS19Q96T76 1030 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 PLIN2Q99541 437 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 STK17AQ9UEE5 414 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 ZNF202O95125 648 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 NLRP12P59046 1061 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 INTS8Q75QN2 995 aaKnown RBP9.18□□□□□ -0.94
CHD8-213ENST00000557364 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.18□□□□□ -0.94
CHD8-213ENST00000557364 ANXA13P27216 316 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 CTDSPL2Q05D32 466 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 ERFEQ4G0M1 354 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 LRCH2Q5VUJ6 765 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 PPFIBP2Q8ND30 876 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 TCP11Q8WWU5 503 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 KCNK9Q9NPC2 374 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 HOXC10Q9NYD6 342 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 ELF1P32519 619 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 ARMCX2Q7L311 632 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 NOSTRINQ8IVI9 506 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 AKT3Q9Y243 479 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 PPFIA3O75145 1194 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 BMP3P12645 472 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 LACTBP83111 547 aaPredicted RBP9.18□□□□□ -0.94
CHD8-213ENST00000557364 RBM10P98175 930 aaKnown RBP9.18□□□□□ -0.94
CHD8-213ENST00000557364 PALM2Q8IXS6 379 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 ATRIPQ8WXE1 791 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 SNX25Q9H3E2 840 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 ASIC3Q9UHC3 531 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 CDK12Q9NYV4 1490 aaPredicted RBP9.18□□□□□ -0.94
CHD8-213ENST00000557364 LRRIQ4A6NIV6 560 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 MAP3K21Q5TCX8 1036 aa9.18□□□□□ -0.94
CHD8-213ENST00000557364 CASC4Q6P4E1 433 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms